Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq95541 104 2e-17 seq29470 95.1 1e-14 seq7617 86.0 7e-12 >seq95541 Length=3042 Score = 104 bits (114), Expect = 2e-17 Identities = 125/166 (75%), Gaps = 3/166 (2%) Strand=Plus/Plus Query 21477 ATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAAC 21536 || |||||| || | || |||| |||||||| || | |||||| || || || | Sbjct 1425 ATACAAAATTACTAAACATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATC 1483 Query 21537 CGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAAGAAA 21595 ||||||| | |||| ||||| |||||||||||||| ||||| ||| ||||| || || Sbjct 1484 CGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAA-GCTGCCTGAGAAAAAT 1542 Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAG 21641 || |||||||| || ||||| |||| || ||||| || |||||| Sbjct 1543 ATTCCCTCAACCGCTGCAAAAGCAATTATACGTTCTCCAAATGTAG 1588 >seq29470 Length=9567 Score = 95.1 bits (104), Expect = 1e-14 Identities = 218/323 (67%), Gaps = 8/323 (2%) Strand=Plus/Plus Query 131860 TCCTATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAAT 131919 || ||||||||| || ||| ||||| ||||| | ||| | || | |||| || || Sbjct 3652 TCTTATGACTCCAGTATTACCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 3711 Query 131920 AGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAAT 131979 | |||| | | |||| |||| ||| ||| ||||||||||||| || || || ||| | Sbjct 3712 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 3771 Query 131980 TCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCA 132039 |||||||| | |||| | ||| |||||| | |||||||| || | |||| Sbjct 3772 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCA 3831 Query 132040 TAAAATTGATGGATTTGATAAACTGTTGA-CTGATGCATTTCCCACAGCAAAAAACTTCA 132098 ||| || | |||| | | | | || | | | |||||||| | || | | |||| | Sbjct 3832 CAAAGTT-AGTCATTTTAAAGATTATTTACCCAAAGCATTTCCTAAAGGAGATGACTTGA 3890 Query 132099 TTTTAGATGCGGAATTAATAATGATAGAT-ACAAAA--TCAAATTCATTTTTACCATTTG 132155 | || ||||| ||| || | ||| | ||| ||| | ||| || || || || | Sbjct 3891 TCTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCA---TTGCCTTTCG 3947 Query 132156 GTTCATTAGGTATACATAAAAAA 132178 || |||||||||| || ||| || Sbjct 3948 GTACATTAGGTATTCACAAACAA 3970 >seq7617 Length=2772 Score = 86.0 bits (94), Expect = 7e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 21125 ATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATT 21184 |||||||| ||||||||||| | ||| ||||| || || | ||| | |||| Sbjct 264 ATTTAAAATTCAGCATCTAAAGTGAAGACATTGTCCATAGGTTGCGCCATCACTCCCCAC 205 Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATAT-AGA 21243 || || || || | |||| |||| || || || ||||| || |||||||| || || ||| Sbjct 204 TTCTGGTATTCTCCAACTTTTTTCTCAAAGAAGTTTGTTTTGCCTTCCAACGAGATGAGA 145 Query 21244 TTCCATAAAATCAAATGGATT 21264 || ||||||||| |||||||| Sbjct 144 TT-CATAAAATCGAATGGATT 125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530836439904160