Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_007023.1 Length=180500 Score E Sequences producing significant alignments: (Bits) Value seq1361 129 7e-25 >seq1361 Length=62553 Score = 129 bits (142), Expect = 7e-25 Identities = 422/645 (65%), Gaps = 32/645 (5%) Strand=Plus/Plus Query 155856 GGCGACATCCACTATCATGATCTGGATTACAGCCCGTTCACGCCATACACAAACTGCTGT 155915 ||||| ||||| ||||||||||| |||||| |||| || ||| ||||| |||||| Sbjct 32177 GGCGATATCCATTATCATGATCTCGATTACCATCCGTATACACCAATGACAAATTGCTGT 32236 Query 155916 CTGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAGACATCGAA 155975 || | || || ||||||||| || || || || || || || || ||||| ||||| Sbjct 32237 TTGATCGACTTCAAAGGTATGTTGAACAACGGGTTTAAAATTGGAAATGCAGAAGTCGAA 32296 Query 155976 CCCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCACAGATTGCT 156035 | || ||||| ||| || || || | || ||||||||| || | |||| Sbjct 32297 TCACCAAAATCGATCCAAACAGCAACGGCACAGATTTCACAGATCATTGCCAATGTTGCA 32356 Query 156036 TCTCACCAGTACGGCGGGACAACCTTTGCAAA---CGTGGATAAAGTGCTGGCTCCGTAT 156092 ||| ||| || ||||| | | ||| | | ||| || |||| ||||| | | Sbjct 32357 TCTAGCCAATATGGCGG---ATGTTCTGCCGATCGCACAGATGAATTGCTTGCTCCTTTT 32413 Query 156093 GCAGAAATGACATATGAAAAGCATGTTAAGGATGCTAAAAAGTATAAAATTTCGTTAGAT 156152 ||| || | | || |||| ||| | | ||||| ||| | | | | || Sbjct 32414 GCACAATTAAATTACAAAAAACATTTAATTGATGCCAAAGAATGGATCGACACACCCGAA 32473 Query 156153 CGTACATATGCG-ATGGAAAAG-----ACTGAAAAAGATGTGTTTGATGCTTTCCAATCG 156206 || | | || ||| ||||| || |||||||| | |||||||| | ||| Sbjct 32474 CGGCAAGAAGCCTATGCAAAAGCAAAAACCAAAAAAGATATTTTTGATGCCATGCAAAGT 32533 Query 156207 TATGAATACGAAGTTAACACGCTGCATACTGCCAACGGACAAACACCTTTCGTTACTATT 156266 | ||||| || | || || || ||| ||||||||||||| ||||| |||| | Sbjct 32534 TTGGAATATGAGATCAATACACTTTTCACTTCCAACGGACAAACGCCTTT---TACT-TC 32589 Query 156267 ACT----TTCGGTACTGGTACGGGAAT--GTTTGAACGGATGATCCAGAAAGCTATTCTG 156320 ||| |||||| |||| ||| ||||||||| ||||| ||||| ||| | Sbjct 32590 ACTCGGCTTCGGTCTAGGTAAA--AATTGGTTTGAACGAGAAATCCAAAAAGCGATTTTA 32647 Query 156321 AAAAACCGTATCCGTGGCCTGGGTA---AAAAAGGTATTACTCCGGTATTCCCTAAACTG 156377 ||| ||| ||| ||| | || | | ||| | | | || | ||||| ||| || Sbjct 32648 CAAATCCGAATCAATGGATTAGGCAGTGAGAAACGGA---CAGCGATCTTCCCAAAATTG 32704 Query 156378 GTTATGTTCATGGAAAAA-GGCATTAACCTTGATCCAGAGGATCGCAACTATGACATCAA 156436 | || | || ||| | || || || ||| | ||| |||| |||||||||||||| Sbjct 32705 AT-ATTTACACTAAAAGACGGAATCAATCTTAAACCAACTGATCCAAACTATGACATCAA 32763 Query 156437 ACAACTGGCTCTGGAATGCGCTTCAAAACGTATGTACCCAGATAT 156481 |||| | || | ||||| || ||||| | |||||||||||||| Sbjct 32764 ACAATTAGCCTTAGAATGTGCCACAAAAAGAATGTACCCAGATAT 32808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576316449654400