Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_007052.1
Length=45861
Score E
Sequences producing significant alignments: (Bits) Value
seq8212 618 1e-172
seq61213 273 6e-69
>seq8212
Length=38766
Score = 618 bits (684), Expect = 1e-172
Identities = 724/976 (74%), Gaps = 12/976 (1%)
Strand=Plus/Minus
Query 25891 TATCACCGTTGAAAATAGAGTTTCTAACAATAACATAATCTACAGTACGTAATGATTTCA 25950
|||| || |||||||| |||||| |||| || |||||||| || |||| | |||| |
Sbjct 38705 TATCCCCATTGAAAATCGAGTTTTTAACGATGACATAATCGACTTTACGAATCGATTCTA 38646
Query 25951 AGTCTTTTCCACCGGCATATGAAATTGAGCTTTGTAAATCTTGTTGCATTTCTTTTAAGG 26010
| || ||||||||||| ||||| || ||||||||||||||||||||| ||| |
Sbjct 38645 AATCACGACCACCGGCATAAGAAATCGAAGATTGTAAATCTTGTTGCATTTCAACTAACG 38586
Query 26011 TATCCATTAATGACCCCTTATGTTCTACAAACAtttttttACCTTCTACATTTTTATGTT 26070
|||| |||| || || || |||| | | ||||| |||||||| |||||||| | ||
Sbjct 38585 TATCTTTTAAAGATCCTTTGTGTTGAATCCAAATTTTCTTACCTTCAACATTTTTCTTTT 38526
Query 26071 CGCCTTTTTGAAATTCAGATGCACTACCAAAATATTCTTTATACTGTTTACCAT---CAA 26127
|||||||||| |||||||| || |||||||||||||| || ||| | |||
Sbjct 38525 CGCCTTTTTGGAATTCAGAAGCTGATCCAAAATATTCTTTGTAAACGACACCGTTCTCAA 38466
Query 26128 GTTCTACAGTTTCACCAGGTGATTCTTCGTGTGCCGCAAATAATGAACCAATCATGACCA 26187
|| | ||||| || ||||||||||||||| | ||||| |||||||| ||||| ||||
Sbjct 38465 CTTTT---GTTTCTCCTGGTGATTCTTCGTGTCCTGCAAACAATGAACCGATCATCACCA 38409
Query 26188 TTGATGCACCAAATCTAATTGACTTAGCGATGTCGCCATGCGTTCTTATGCCACCATCGG 26247
| | |||||||| | | ||| || |||| || ||| | || | |||||||| || |
Sbjct 38408 TCGTCGCACCAAAACGTACTGATTTCGCGACATCTCCAGGTGTACGGATGCCACCGTCAG 38349
Query 26248 CAATCAAAGGTTTACGAGCTGCTTTACTACATATGTTTAATGCCGCTAACTGCCAACCAC 26307
|||| | |||||| || || ||||| || ||| ||||||||| ||||||||||
Sbjct 38348 CAATGATAGGTTTGCGGGCAGCTTTCGCGCACCATCTTAGTGCCGCTAATTGCCAACCAC 38289
Query 26308 CAGTACCAAAACCTGTTTTAATCTTTGTAATACAAACTCTACCAGGACCTATACCGACTT 26367
||||||||||||| ||||| || ||||| ||||| ||| | || || || || |||||||
Sbjct 38288 CAGTACCAAAACCAGTTTTGATTTTTGTGATACATACTTTTCCTGGGCCAATGCCGACTT 38229
Query 26368 TGGTAGCATCAGCACCAGCATTTTCTAATTCTCTAACACCTTCTGGCGTACCAACATTAC 26427
| || ||||| || ||||| ||||||||||||| ||| |||||||||| || || || |
Sbjct 38228 TCGTTGCATCTGCTCCAGCGTTTTCTAATTCTCGAACGGCTTCTGGCGTGCCGACGTTCC 38169
Query 26428 CAGCAATAACAAAACTATCAGGTATATGGGTTTTAATATGTTTAATCATGTTTATCACTG 26487
| ||||| ||||| |||| |||| ||| |||| ||||| | ||||| ||||| |
Sbjct 38168 CTGCAATGACAAACGTATCTGGTAAATGCTTTTTGATATGCTGGATCATCGCAATCACAG 38109
Query 26488 AATCTGAGTGACCATGCGCAATATCTATTGTAATATATTCGGGGATTA---ATTTTTCTT 26544
|| ||| || ||||| |||||||| ||||||||||| || || | | ||||||||
Sbjct 38108 CATTTGAATGTCCATGGGCAATATCAATTGTAATATAATCTGGTACAAGCGATTTTTCTA 38049
Query 26545 GAGCTAACTTTTCAATAAAATCAAATTCCGCTTTCTTTACACCAACTGAAATAGATGCAA 26604
|||| | ||| | |||| || | || |||| || || || || |||||| | ||
Sbjct 38048 ---CTAATTCTTCTACAAAAGCATACTCGTCTTTTTTCACGCCTACACTAATAGAAGAAA 37992
Query 26605 ATAAGCCTGAATTTTGCATATGTTTTATAAAAGGTATTCTTGCTTCTTCATCAAAACGAT 26664
||| | || ||| | || ||||| || |||| ||||||||| ||||||||||
Sbjct 37991 TTAAATTTCTTGCTTTCATTTTTTCGATAAATGGGATTCGTGCTTCTTCTTCAAAACGAT 37932
Query 26665 GCATGATATAAAAGTAATCATTTTCAGCAAACCATTTCGCTAATTTCTCATTCATAACTG 26724
|||||||||| || ||| |||||||||| || ||| ||| | | |||| || | |
Sbjct 37931 GCATGATATAGAAATAACCATTTTCAGCTAAAAATTCCGCAATCGTTTCATCAATGATCG 37872
Query 26725 TTTGCATATTTGCAGGAACTACAGGTAGCTTGAATTTTTTCGGACCAAATTGGATAGTTG 26784
||||||||||||| || || || || | || || | | | ||| || | |||||
Sbjct 37871 TTTGCATATTTGCTGGTACAACCGGCATTTTAAAGGTATGTGAACCTAAAGTCACAGTTG 37812
Query 26785 TATCACATTCTGATCTACTCTCAACTATACATTTATTAGGTATTAATTGAATATCTTCAT 26844
||||||||||||| | || | || |||||||||||||| || | |||||||||||| |
Sbjct 37811 TATCACATTCTGAACGGCTGTTTACGATACATTTATTAGGAATCAGTTGAATATCTTCGT 37752
Query 26845 AGTCAAATATTTTCAT 26860
| ||||||| ||||||
Sbjct 37751 AATCAAATACTTTCAT 37736
>seq61213
Length=4889
Score = 273 bits (302), Expect = 6e-69
Identities = 674/1010 (67%), Gaps = 52/1010 (5%)
Strand=Plus/Minus
Query 25892 ATCACCGTTGAAAATAGAGTTTCTAACAATAACATAATCTACAGTACGT-AATGATTTCA 25950
|||||| || ||||| | |||||||||||||||| ||| | || |||| |
Sbjct 4648 ATCACCATTATTAATAGTACCTTTAACAATAACATAATC-ACATTTTGTTAATGCAGATA 4590
Query 25951 AGTCTTTTCCACCGGCATATGAAATTGAGCTTTGTAAATCTTGTTGCATTTCTTTTAAGG 26010
| ||||| ||||| ||||| ||||| | ||||||||||| || |||||||| | |
Sbjct 4589 AATCTTTACCACCAGCATAAGAAATAGCAGATTGTAAATCTTCTTCAATTTCTTTATAAG 4530
Query 26011 TATCCATTAATGACCCCTTATGTTCTACAAACAtttttttACCTTCTACATTTTTATGTT 26070
|||| | ||| || |||| | |||| |||||||||||||| | |||||| ||
Sbjct 4529 TATCAGCAATTGAACCTTTATATGGAACAAGTATTTTTTTACCTTCAATATTTTTTGCTT 4470
Query 26071 CGCCTTTTTGAAATTCAGATGCACTACCAAAATATTCTTTATACTGTTTACCATCAAGTT 26130
| |||| | ||| | ||| |||||||||||||| || || ||||| | |
Sbjct 4469 CCGCTTTGTTAAAAATACTTGCTGATCCAAAATATTCTTTGTAAGATTGACCATTTATTG 4410
Query 26131 CTACAGTTTCACCAGGTGATTCTTCGTGTGCCGC--AAATAATGAACCAATCATGACCAT 26188
||| ||| ||||||||||| || | |||| ||||| | || ||| | |||
Sbjct 4409 TAACAATTTTGCCAGGTGATTCATCATAACCCGCTAAAATACT--TCCTGCCATAATCAT 4352
Query 26189 TGATGCACCAAATCTAATTGACTTAGCGATGTCGCCATGCGTTCTTATGCCACCATCGGC 26248
| |||| ||| |||| ||||| || || |||| ||| || |||||||| ||
Sbjct 4351 AGTGGCACTAAAAGCTATTGCTTTAGCAATATCACCATTACATCTAATACCACCATCTGC 4292
Query 26249 AATCAAAGGTTTACGAGCTGC--TTTACTACATATGTTTAATGCCGCTAACTGCCAACCA 26306
||| || |||||| | | ||| || | |||| | | ||| || ||| || ||||||
Sbjct 4291 AATTAATGGTTTA-GTGGTGCTATTGGCAACATCT-TGTAAAGCATTTAATTGTCAACCA 4234
Query 26307 CCAGTACCAAAACCTGTTTTAATCTTTGTAATACAAACTCTACCAGGACCTATACCGACT 26366
|| |||||||| || ||||| | || ||||||||| || | || ||||| | ||| | |
Sbjct 4233 CCTGTACCAAATCCAGTTTTTAGTTTAGTAATACAAGCTTTTCCTGGACCAACACCAAAT 4174
Query 26367 TTGGTAGCATCAGCACCAGCATTTTCTAATTCTCTAACACC---TTCTGGCGTACCAACA 26423
|| | |||||| | || |||||||| ||| ||||| | || || | | |||
Sbjct 4173 TTAATTGCATCAACGCCTCATTTTTCTAAATCTTTAACAGCGGTTTTTGTCAT---AACG 4117
Query 26424 TTACCAGCAATAACAAAACTATCAGGTATATG-------------GGTTTTAATATGTTT 26470
||||||||||||| |||| | | |||| || ||||| ||| |||
Sbjct 4116 TTACCAGCAATAATAAAAGGTTTA-GTATTTGTTTTAGCAAAAGTAGTTTTTATAAATTT 4058
Query 26471 AATCATGTTTATCACTGAATCTGAGTGACCATGCGCAATATCTATTGTAATATATTCGGG 26530
|||||| | | || | || |||||||| |||||||| || |||||| |||| ||
Sbjct 4057 AATCATTTCTTCCATAGCATTACTATGACCATGAGCAATATCAATAGTAATAAATTCTGG 3998
Query 26531 GATTA-ATTTTTCTTGAGCTAACTTTTCAATAAAATCAAATTCCGCTTTCTTTACACCAA 26589
|||| |||| |||| ||| | ||||| || || ||| |||| || |||||||
Sbjct 3997 AATTAGATTTAGTTTGA-TTAATTGTTCAAGTAACTCTTTATCCTCTTTTTTAACACCAA 3939
Query 26590 CTGAAATAGATGCAAATAAGCCTGAATTTTGCATATGTTTTATAAAAGGTATTCTTGCTT 26649
||| || ||| |||| | | |||||| ||| ||||| | | || |
Sbjct 3938 TGCTAATTGAAGCATATAACTTTTGTTCATGCATACTTTTAATAAA---TTTAATTTGAT 3882
Query 26650 CTTCATCAAAACGATGCATGATATAAAAGTAATCATTTTCAGCAAACCATTTCGCTAATT 26709
| || |||||| ||||| | ||||||||||| ||||| ||| || || | |||||
Sbjct 3881 CGATATTAAAACGGTGCATTACATAAAAGTAATTATTTTTAGCCAATCAAATACATAATT 3822
Query 26710 TCTCATTCATAACTGTTTGCATATTTGCAGGAACTACAGGTAGCTTGAATTTT----TTC 26765
| || || || || ||||||||| |||| || | ||||||| |
Sbjct 3821 CTTGGTTAATGACAGTACTCATATTTGCTGGAA-------TAATTGGAATTTTAAAAGTA 3769
Query 26766 GGACCA---AATTGGATAGTTGTATCACATTCTGATCTACTCTCAACTATACATTTATTA 26822
|||| | || | | | |||||||||||| || | |||||| | ||||||
Sbjct 3768 AAACCATTTAGTTTAACACTGGTATCACATTCTTTTCGTGATTTAACTATTCCTTTATTT 3709
Query 26823 GGTATTAATTGAATATCTTCATAGTCAAAT---ATTTTCATTTTTATTTA 26869
| |||| | ||||||||| | |||||| | ||||||||||||||
Sbjct 3708 GCAATTAGATTTATATCTTCAAAATCAAATTTCACATTCATTTTTATTTA 3659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146354849892984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |