Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_007052.1 Length=45861 Score E Sequences producing significant alignments: (Bits) Value seq8212 618 1e-172 seq61213 273 6e-69 >seq8212 Length=38766 Score = 618 bits (684), Expect = 1e-172 Identities = 724/976 (74%), Gaps = 12/976 (1%) Strand=Plus/Minus Query 25891 TATCACCGTTGAAAATAGAGTTTCTAACAATAACATAATCTACAGTACGTAATGATTTCA 25950 |||| || |||||||| |||||| |||| || |||||||| || |||| | |||| | Sbjct 38705 TATCCCCATTGAAAATCGAGTTTTTAACGATGACATAATCGACTTTACGAATCGATTCTA 38646 Query 25951 AGTCTTTTCCACCGGCATATGAAATTGAGCTTTGTAAATCTTGTTGCATTTCTTTTAAGG 26010 | || ||||||||||| ||||| || ||||||||||||||||||||| ||| | Sbjct 38645 AATCACGACCACCGGCATAAGAAATCGAAGATTGTAAATCTTGTTGCATTTCAACTAACG 38586 Query 26011 TATCCATTAATGACCCCTTATGTTCTACAAACAtttttttACCTTCTACATTTTTATGTT 26070 |||| |||| || || || |||| | | ||||| |||||||| |||||||| | || Sbjct 38585 TATCTTTTAAAGATCCTTTGTGTTGAATCCAAATTTTCTTACCTTCAACATTTTTCTTTT 38526 Query 26071 CGCCTTTTTGAAATTCAGATGCACTACCAAAATATTCTTTATACTGTTTACCAT---CAA 26127 |||||||||| |||||||| || |||||||||||||| || ||| | ||| Sbjct 38525 CGCCTTTTTGGAATTCAGAAGCTGATCCAAAATATTCTTTGTAAACGACACCGTTCTCAA 38466 Query 26128 GTTCTACAGTTTCACCAGGTGATTCTTCGTGTGCCGCAAATAATGAACCAATCATGACCA 26187 || | ||||| || ||||||||||||||| | ||||| |||||||| ||||| |||| Sbjct 38465 CTTTT---GTTTCTCCTGGTGATTCTTCGTGTCCTGCAAACAATGAACCGATCATCACCA 38409 Query 26188 TTGATGCACCAAATCTAATTGACTTAGCGATGTCGCCATGCGTTCTTATGCCACCATCGG 26247 | | |||||||| | | ||| || |||| || ||| | || | |||||||| || | Sbjct 38408 TCGTCGCACCAAAACGTACTGATTTCGCGACATCTCCAGGTGTACGGATGCCACCGTCAG 38349 Query 26248 CAATCAAAGGTTTACGAGCTGCTTTACTACATATGTTTAATGCCGCTAACTGCCAACCAC 26307 |||| | |||||| || || ||||| || ||| ||||||||| |||||||||| Sbjct 38348 CAATGATAGGTTTGCGGGCAGCTTTCGCGCACCATCTTAGTGCCGCTAATTGCCAACCAC 38289 Query 26308 CAGTACCAAAACCTGTTTTAATCTTTGTAATACAAACTCTACCAGGACCTATACCGACTT 26367 ||||||||||||| ||||| || ||||| ||||| ||| | || || || || ||||||| Sbjct 38288 CAGTACCAAAACCAGTTTTGATTTTTGTGATACATACTTTTCCTGGGCCAATGCCGACTT 38229 Query 26368 TGGTAGCATCAGCACCAGCATTTTCTAATTCTCTAACACCTTCTGGCGTACCAACATTAC 26427 | || ||||| || ||||| ||||||||||||| ||| |||||||||| || || || | Sbjct 38228 TCGTTGCATCTGCTCCAGCGTTTTCTAATTCTCGAACGGCTTCTGGCGTGCCGACGTTCC 38169 Query 26428 CAGCAATAACAAAACTATCAGGTATATGGGTTTTAATATGTTTAATCATGTTTATCACTG 26487 | ||||| ||||| |||| |||| ||| |||| ||||| | ||||| ||||| | Sbjct 38168 CTGCAATGACAAACGTATCTGGTAAATGCTTTTTGATATGCTGGATCATCGCAATCACAG 38109 Query 26488 AATCTGAGTGACCATGCGCAATATCTATTGTAATATATTCGGGGATTA---ATTTTTCTT 26544 || ||| || ||||| |||||||| ||||||||||| || || | | |||||||| Sbjct 38108 CATTTGAATGTCCATGGGCAATATCAATTGTAATATAATCTGGTACAAGCGATTTTTCTA 38049 Query 26545 GAGCTAACTTTTCAATAAAATCAAATTCCGCTTTCTTTACACCAACTGAAATAGATGCAA 26604 |||| | ||| | |||| || | || |||| || || || || |||||| | || Sbjct 38048 ---CTAATTCTTCTACAAAAGCATACTCGTCTTTTTTCACGCCTACACTAATAGAAGAAA 37992 Query 26605 ATAAGCCTGAATTTTGCATATGTTTTATAAAAGGTATTCTTGCTTCTTCATCAAAACGAT 26664 ||| | || ||| | || ||||| || |||| ||||||||| |||||||||| Sbjct 37991 TTAAATTTCTTGCTTTCATTTTTTCGATAAATGGGATTCGTGCTTCTTCTTCAAAACGAT 37932 Query 26665 GCATGATATAAAAGTAATCATTTTCAGCAAACCATTTCGCTAATTTCTCATTCATAACTG 26724 |||||||||| || ||| |||||||||| || ||| ||| | | |||| || | | Sbjct 37931 GCATGATATAGAAATAACCATTTTCAGCTAAAAATTCCGCAATCGTTTCATCAATGATCG 37872 Query 26725 TTTGCATATTTGCAGGAACTACAGGTAGCTTGAATTTTTTCGGACCAAATTGGATAGTTG 26784 ||||||||||||| || || || || | || || | | | ||| || | ||||| Sbjct 37871 TTTGCATATTTGCTGGTACAACCGGCATTTTAAAGGTATGTGAACCTAAAGTCACAGTTG 37812 Query 26785 TATCACATTCTGATCTACTCTCAACTATACATTTATTAGGTATTAATTGAATATCTTCAT 26844 ||||||||||||| | || | || |||||||||||||| || | |||||||||||| | Sbjct 37811 TATCACATTCTGAACGGCTGTTTACGATACATTTATTAGGAATCAGTTGAATATCTTCGT 37752 Query 26845 AGTCAAATATTTTCAT 26860 | ||||||| |||||| Sbjct 37751 AATCAAATACTTTCAT 37736 >seq61213 Length=4889 Score = 273 bits (302), Expect = 6e-69 Identities = 674/1010 (67%), Gaps = 52/1010 (5%) Strand=Plus/Minus Query 25892 ATCACCGTTGAAAATAGAGTTTCTAACAATAACATAATCTACAGTACGT-AATGATTTCA 25950 |||||| || ||||| | |||||||||||||||| ||| | || |||| | Sbjct 4648 ATCACCATTATTAATAGTACCTTTAACAATAACATAATC-ACATTTTGTTAATGCAGATA 4590 Query 25951 AGTCTTTTCCACCGGCATATGAAATTGAGCTTTGTAAATCTTGTTGCATTTCTTTTAAGG 26010 | ||||| ||||| ||||| ||||| | ||||||||||| || |||||||| | | Sbjct 4589 AATCTTTACCACCAGCATAAGAAATAGCAGATTGTAAATCTTCTTCAATTTCTTTATAAG 4530 Query 26011 TATCCATTAATGACCCCTTATGTTCTACAAACAtttttttACCTTCTACATTTTTATGTT 26070 |||| | ||| || |||| | |||| |||||||||||||| | |||||| || Sbjct 4529 TATCAGCAATTGAACCTTTATATGGAACAAGTATTTTTTTACCTTCAATATTTTTTGCTT 4470 Query 26071 CGCCTTTTTGAAATTCAGATGCACTACCAAAATATTCTTTATACTGTTTACCATCAAGTT 26130 | |||| | ||| | ||| |||||||||||||| || || ||||| | | Sbjct 4469 CCGCTTTGTTAAAAATACTTGCTGATCCAAAATATTCTTTGTAAGATTGACCATTTATTG 4410 Query 26131 CTACAGTTTCACCAGGTGATTCTTCGTGTGCCGC--AAATAATGAACCAATCATGACCAT 26188 ||| ||| ||||||||||| || | |||| ||||| | || ||| | ||| Sbjct 4409 TAACAATTTTGCCAGGTGATTCATCATAACCCGCTAAAATACT--TCCTGCCATAATCAT 4352 Query 26189 TGATGCACCAAATCTAATTGACTTAGCGATGTCGCCATGCGTTCTTATGCCACCATCGGC 26248 | |||| ||| |||| ||||| || || |||| ||| || |||||||| || Sbjct 4351 AGTGGCACTAAAAGCTATTGCTTTAGCAATATCACCATTACATCTAATACCACCATCTGC 4292 Query 26249 AATCAAAGGTTTACGAGCTGC--TTTACTACATATGTTTAATGCCGCTAACTGCCAACCA 26306 ||| || |||||| | | ||| || | |||| | | ||| || ||| || |||||| Sbjct 4291 AATTAATGGTTTA-GTGGTGCTATTGGCAACATCT-TGTAAAGCATTTAATTGTCAACCA 4234 Query 26307 CCAGTACCAAAACCTGTTTTAATCTTTGTAATACAAACTCTACCAGGACCTATACCGACT 26366 || |||||||| || ||||| | || ||||||||| || | || ||||| | ||| | | Sbjct 4233 CCTGTACCAAATCCAGTTTTTAGTTTAGTAATACAAGCTTTTCCTGGACCAACACCAAAT 4174 Query 26367 TTGGTAGCATCAGCACCAGCATTTTCTAATTCTCTAACACC---TTCTGGCGTACCAACA 26423 || | |||||| | || |||||||| ||| ||||| | || || | | ||| Sbjct 4173 TTAATTGCATCAACGCCTCATTTTTCTAAATCTTTAACAGCGGTTTTTGTCAT---AACG 4117 Query 26424 TTACCAGCAATAACAAAACTATCAGGTATATG-------------GGTTTTAATATGTTT 26470 ||||||||||||| |||| | | |||| || ||||| ||| ||| Sbjct 4116 TTACCAGCAATAATAAAAGGTTTA-GTATTTGTTTTAGCAAAAGTAGTTTTTATAAATTT 4058 Query 26471 AATCATGTTTATCACTGAATCTGAGTGACCATGCGCAATATCTATTGTAATATATTCGGG 26530 |||||| | | || | || |||||||| |||||||| || |||||| |||| || Sbjct 4057 AATCATTTCTTCCATAGCATTACTATGACCATGAGCAATATCAATAGTAATAAATTCTGG 3998 Query 26531 GATTA-ATTTTTCTTGAGCTAACTTTTCAATAAAATCAAATTCCGCTTTCTTTACACCAA 26589 |||| |||| |||| ||| | ||||| || || ||| |||| || ||||||| Sbjct 3997 AATTAGATTTAGTTTGA-TTAATTGTTCAAGTAACTCTTTATCCTCTTTTTTAACACCAA 3939 Query 26590 CTGAAATAGATGCAAATAAGCCTGAATTTTGCATATGTTTTATAAAAGGTATTCTTGCTT 26649 ||| || ||| |||| | | |||||| ||| ||||| | | || | Sbjct 3938 TGCTAATTGAAGCATATAACTTTTGTTCATGCATACTTTTAATAAA---TTTAATTTGAT 3882 Query 26650 CTTCATCAAAACGATGCATGATATAAAAGTAATCATTTTCAGCAAACCATTTCGCTAATT 26709 | || |||||| ||||| | ||||||||||| ||||| ||| || || | ||||| Sbjct 3881 CGATATTAAAACGGTGCATTACATAAAAGTAATTATTTTTAGCCAATCAAATACATAATT 3822 Query 26710 TCTCATTCATAACTGTTTGCATATTTGCAGGAACTACAGGTAGCTTGAATTTT----TTC 26765 | || || || || ||||||||| |||| || | ||||||| | Sbjct 3821 CTTGGTTAATGACAGTACTCATATTTGCTGGAA-------TAATTGGAATTTTAAAAGTA 3769 Query 26766 GGACCA---AATTGGATAGTTGTATCACATTCTGATCTACTCTCAACTATACATTTATTA 26822 |||| | || | | | |||||||||||| || | |||||| | |||||| Sbjct 3768 AAACCATTTAGTTTAACACTGGTATCACATTCTTTTCGTGATTTAACTATTCCTTTATTT 3709 Query 26823 GGTATTAATTGAATATCTTCATAGTCAAAT---ATTTTCATTTTTATTTA 26869 | |||| | ||||||||| | |||||| | |||||||||||||| Sbjct 3708 GCAATTAGATTTATATCTTCAAAATCAAATTTCACATTCATTTTTATTTA 3659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146354849892984