Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_007581.1 Length=185683 Score E Sequences producing significant alignments: (Bits) Value seq1005 242 4e-59 seq7224 95.1 1e-14 >seq1005 Length=293406 Score = 242 bits (268), Expect = 4e-59 Identities = 921/1427 (65%), Gaps = 80/1427 (6%) Strand=Plus/Plus Query 136202 TTCATATTACCACTGCTACTCAAAATATGGACAAACATACCCATATCGAGATTG------ 136255 ||||| || || |||||||||||||||| |||||| ||||| ||||||||||| Sbjct 109995 TTCATCTTTCCTCTGCTACTCAAAATATAGACAAAAATACCTATATCGAGATTTCTCTAC 110054 Query 136256 -----------------TTACTGTTTCAACGTACCCTGTCTTGCCT-----AAGCTACTA 136293 ||||||||||| || || | | || | | | |||||| Sbjct 110055 CACTCACGTAGGTAGAATTACTGTTTCACCGAACGCCGCCTCGTCACTTCGACACTACTA 110114 Query 136294 CAGTTTGTATAGCACTCCACAGTCGTTAATTCCCGAATTAGCCTTCGGTACATATATAAG 136353 | |||||| | | ||||||||||||| |||||||| | |||| |||||||||||| || Sbjct 110115 CGGTTTGTCTCGTTCTCCACAGTCGTTGATTCCCGACTAAGCCATCGGTACATATACAA- 110173 Query 136354 AACTTGTTTAATTAAGCTATC---TTATATTTTTTAACATTAGCTAAATTAATACTTGCA 136410 | ||| | ||| || ||| || |||| || |||| ||||| || ||||| Sbjct 110174 -AGTTGCGTGCTTATGCAATCACATTGTATTCCTTCACATCTTTCAAATTCATGCTTGCG 110232 Query 136411 TTTAAATCTCTATCAATAACAAGTCCACAATT---ACATTTATAAACTCTATCAGATAGT 136467 || |||||||||| || ||||| || ||| ||| | || ||||| Sbjct 110233 TTATAATCTCTATCTGCTACGTACCCACAGTTCTCACAACGATAGGTACGCTCTGATAGC 110292 Query 136468 TTTAAATCTTTCTTAATAGATCCACAACAACTACAAGTTTTACTACTAGGATAAAATCTA 136527 |||||| || || || ||||| | ||| ||| |||||||| |||| | Sbjct 110293 TTTAAAGCTACTTTCTTATGCCCACATTCATGACATAATTTCGAGCTAGGATAGAATCGA 110352 Query 136528 TCAACTACTCTAAGTTCAATATTATTTTGATTACACTTAGAGGTTAATTTAGTTCTAAAT 136587 || | | ||| | |||||| || ||||| || | |||||| | | ||| Sbjct 110353 TCGGCCAGTCTTAACTCAATAGTAGAGACTTTACATTTGTCTGCTAATTTTTTACGAAAA 110412 Query 136588 TCATAAAATTTTTGTTGTGCTACTGCTTTAGCTAGATGTTTATTCTTCATCATTCCACTA 136647 |||| || ||| | | || ||||| | ||||| || || ||||| || | Sbjct 110413 GCATAGAAAGATTGCTCTCTCACAGCTTTTGAAAGATGCCGGTTTTTTATCATCCCCTTG 110472 Query 136648 ATATTTAAATCTTCAATAGTTATATAGCTTGGTTTTTGCTTAACTATTTCACTTACAGTT 136707 | ||| ||||||||||| || ||||| |||||| || |||| || ||| || Sbjct 110473 ACATTCAAATCTTCAATTGTGATATAAGCTGGTTTGGTTTTTACTAGCTCTGACACAATT 110532 Query 136708 TTATTTATATAATCAGTTCTTATATTAGTAAGTTTTTCATGAAGTTTTTGTACCTTGACt 136767 ||||| | || | | |||| || | || ||||||||||||||| || | Sbjct 110533 TTATTCACTCTGTCCCTACGGATATCTGTCAACCGTTTATGAAGTTTTTGTACTTTCAAG 110592 Query 136768 atttgtttttggatattttgtctagtagctttacctc-cttttata-tttttattt---- 136821 | |||||||| | ||||| | |||||||| |||| |||| || ||||| || Sbjct 110593 ACTTGTTTTTCAACATTTTTGCGAGTAGCTTCTCCTCTCTTTGATTGTTTTTCGTTGACA 110652 Query 136822 --cttgttttcaaactctcatatttccttgaaagttttctttgttctcttttcaatttct 136879 ||| ||||| || || |||||||| || || || | ||||| || ||| |||| | Sbjct 110653 CGCTTTTTTTCG--CTTTCGTATTTCCTCGACAGCTTGCGTTGTTGTCGTTTTAATTGTT 110710 Query 136880 tttctacttttctaactcttgatgttttatttatattcttAAACTTATCTCCATTTGAAC 136939 |||| | ||| | || | || || |||||| ||||| ||| | | | || | ||| Sbjct 110711 TTTCGATTTTACGAATTTTTCCTGATTTATTGATATTTTTATAGGTTTTCCCCGTGGAAA 110770 Query 136940 ATATTGCAAAATCTTTTAGTCCTAAGTCAATCCCAATTCCCTCGTTTGTAGG-GTTTGG- 136997 || ||||||||||||| ||||||||| || || | || ||| ||||| || | | Sbjct 110771 GAATCGCAAAATCTTTTAATCCTAAGTCGATACCCACGCCTTCG---GTAGGAGTATCGT 110827 Query 136998 -AACTACTATA----TCCATT--TCTTCAACTAGTATAGATACATAGTACCTATTAGCTT 137050 | |||| | | || | | ||| || | | || | ||||||| || |||| Sbjct 110828 TCAGTACTTGAGCGGTACAGTCCTGTTCCACGATGACCGACAGGTAGTACCGGTTTGCTT 110887 Query 137051 TGTAACCAACTGTGCCACTTT------TAACTTTCACAT-TTGTT--GGTATATATCCAA 137101 | | | ||||||||| | || ||| ||| |||| || ||||| || Sbjct 110888 GTTGGCTGATTGTGCCACTCTTTATGCTATGTTTGTCATCGTGTTTAGGAATATAGCCTT 110947 Query 137102 ACTCTTTTAATCTCATCCAA--CCAAGAGTAGGTATTTTTACTCTAT-AC-CTTTCAATA 137157 ||||| | | | | |||| | ||||| || | ||||| | || || || ||| Sbjct 110948 TTTCTTTCAGTTTTACCCAATTCAAAGAG--GGAACTTTTATCCGATGACGCTCACAACG 111005 Query 137158 GTCCAAT-CAGTTTTATTGTTCTTTGGAAAATA-AGCTTTAACATCTTGGTTTTTCTTTT 137215 | | | |||||| |||||| ||||| | | | |||||||||| ||||| | Sbjct 111006 GATGATTGTCTTTTTATCGTTCTTCACGAAATACATCGAT-ACATCTTGGTGCTTCTTCT 111064 Query 137216 TCTTAAATTTAGGGAATCCACTTAAGCCTTTGAAAAACTTCTTAAATGCTTTTTCTCCAT 137275 | ||||||||||| || | | |||| ||||| || |||| ||||||||| | Sbjct 111065 TTTTAAATTTAGGAAAATTAGCTTTTCCTTGAAAAAAATTTCTAAAGGCTTTTTCTGTCT 111124 Query 137276 TCATTATAGATTGTTTGGTAGCTTTTGAAGAAACTTCTTTAATCCAAATTTTATCTTGAT 137335 ||| || | ||||| || | || | | |||| |||| ||||| || || ||| ||| Sbjct 111125 CCATAATCGCATGTTTCGTTGACTTCGCATAAACAGCTTTGATCCACATCTTGTCTGGAT 111184 Query 137336 TATTAGGAATATATTCATTATTTAACCATTTAGAAAATTGCATACCACTTATAAATTTAT 137395 || ||||| || || ||||| ||||| || ||||| | ||||| | |||||| Sbjct 111185 GGTTGGGAATGTAGTCGTTATTCAACCACTTTGAAAAATCTATACCTGAGACAAATTTCC 111244 Query 137396 TTTCTTTTTCATAAATTGCTTTATTATGAGCTATATAAAAATTATAAATAAATCTACTAA 137455 || || ||| | | ||| || || |||||||| || | | ||| | | || Sbjct 111245 CACCTGATTTATAGACTTCTTGGTTGTGGTAAATATAAAAGTTCTTTACAAAACGAGCAA 111304 Query 137456 CTCCAATAGTTTTATGAATTTTTATACTTTGTTCTTGAGTTGGTTTTATCTCCACTTTGT 137515 | ||||| ||| || ||| || | ||||||||| ||||| || || ||||| Sbjct 111305 CACCAATGGTTCGATTAATGATT-TTTTTTGTTCTTCTGTTGGAAGAATTTCTGTTTTGT 111363 Query 137516 AAGCTCTTAACAATTTCATCATCCTCCTTAAtttttttCTTATATTT 137562 | || ||||| || |||| ||| | ||| | ||| ||||| || Sbjct 111364 ACGCCACTAACATCTTTATCA-CCT--TCAATCTCTTTATTATACTT 111407 Score = 237 bits (262), Expect = 2e-57 Identities = 913/1416 (64%), Gaps = 80/1416 (6%) Strand=Plus/Plus Query 161481 TCTGCTACTCAAAATATGGACAAACATACCCATATCGAGATTG----------------- 161523 ||||||||||||||||| |||||| ||||| ||||||||||| Sbjct 110006 TCTGCTACTCAAAATATAGACAAAAATACCTATATCGAGATTTCTCTACCACTCACGTAG 110065 Query 161524 ------TTACTGTTTCAACGTACCCTGTCTTGCCT-----AAGCTACTACAGTTTGTATA 161572 ||||||||||| || || | | || | | | ||||||| |||||| | Sbjct 110066 GTAGAATTACTGTTTCACCGAACGCCGCCTCGTCACTTCGACACTACTACGGTTTGTCTC 110125 Query 161573 GCACTCCACAGTCGTTAATTCCCGAATTAGCCTTCGGTACATATATAAGAACTTGTTTAA 161632 | ||||||||||||| |||||||| | |||| |||||||||||| || | ||| | Sbjct 110126 GTTCTCCACAGTCGTTGATTCCCGACTAAGCCATCGGTACATATACAA--AGTTGCGTGC 110183 Query 161633 TTAAGCTATC---TTATATTTTTTAACATTAGCTAAATTAATACTTGCATTTAAATCTCT 161689 ||| || ||| || |||| || |||| ||||| || ||||| || ||||||| Sbjct 110184 TTATGCAATCACATTGTATTCCTTCACATCTTTCAAATTCATGCTTGCGTTATAATCTCT 110243 Query 161690 ATCAATAACAAGTCCACAATT---ACATTTATAAACTCTATCAGATAGTTTTAAATCTTT 161746 ||| || ||||| || ||| ||| | || ||||| |||||| || Sbjct 110244 ATCTGCTACGTACCCACAGTTCTCACAACGATAGGTACGCTCTGATAGCTTTAAAGCTAC 110303 Query 161747 CTTAATAGATCCACAACAACTACAAGTTTTACTACTAGGATAAAATCTATCAACTACTCT 161806 || || ||||| | ||| ||| |||||||| |||| ||| | | ||| Sbjct 110304 TTTCTTATGCCCACATTCATGACATAATTTCGAGCTAGGATAGAATCGATCGGCCAGTCT 110363 Query 161807 AAGTTCAATATTATTTTGATTACACTTAGAGGTTAATTTAGTTCTAAATTCATAAAATTT 161866 | |||||| || ||||| || | |||||| | | ||| |||| || Sbjct 110364 TAACTCAATAGTAGAGACTTTACATTTGTCTGCTAATTTTTTACGAAAAGCATAGAAAGA 110423 Query 161867 TTGTTGTGCTACTGCTTTAGCTAGATGTTTATTCTTCATCATTCCACTAATATTTAAATC 161926 ||| | | || ||||| | ||||| || || ||||| || | | ||| ||||| Sbjct 110424 TTGCTCTCTCACAGCTTTTGAAAGATGCCGGTTTTTTATCATCCCCTTGACATTCAAATC 110483 Query 161927 TTCAATAGTTATATAGCTTGGTTTTTGCTTAACTATTTCACTTACAGTTTTATTTATATA 161986 |||||| || ||||| |||||| || |||| || ||| ||||||| | Sbjct 110484 TTCAATTGTGATATAAGCTGGTTTGGTTTTTACTAGCTCTGACACAATTTTATTCACTCT 110543 Query 161987 ATCAGTTCTTATATTAGTAAGTTTTTCATGAAGTTTTTGTACCTTGACtatttgtttttg 162046 || | | |||| || | || ||||||||||||||| || | | |||||||| Sbjct 110544 GTCCCTACGGATATCTGTCAACCGTTTATGAAGTTTTTGTACTTTCAAGACTTGTTTTTC 110603 Query 162047 gatattttgtctagtagctttacctc-cttttata-tttttattt------cttgttttc 162098 | ||||| | |||||||| |||| |||| || ||||| || ||| ||||| Sbjct 110604 AACATTTTTGCGAGTAGCTTCTCCTCTCTTTGATTGTTTTTCGTTGACACGCTTTTTTTC 110663 Query 162099 aaactctcatatttccttgaaagttttctttgttctcttttcaatttcttttctactttt 162158 || || |||||||| || || || | ||||| || ||| |||| ||||| | ||| Sbjct 110664 G--CTTTCGTATTTCCTCGACAGCTTGCGTTGTTGTCGTTTTAATTGTTTTTCGATTTTA 110721 Query 162159 ctaactcttgatgttttatttatattcttAAACTTATCTCCATTTGAACATATTGCAAAA 162218 | || | || || |||||| ||||| ||| | | | || | ||| || |||||| Sbjct 110722 CGAATTTTTCCTGATTTATTGATATTTTTATAGGTTTTCCCCGTGGAAAGAATCGCAAAA 110781 Query 162219 TCTTTTAGTCCTAAGTCAATCCCAATTCCCTCGTTTGTAGG-GTTTGG--AACTACTATA 162275 ||||||| ||||||||| || || | || ||| ||||| || | | | |||| | Sbjct 110782 TCTTTTAATCCTAAGTCGATACCCACGCCTTCG---GTAGGAGTATCGTTCAGTACTTGA 110838 Query 162276 ----TCCATT--TCTTCAACTAGTATAGATACATAGTACCTATTAGCTTTGTAACCAACT 162329 | || | | ||| || | | || | ||||||| || |||| | | | | Sbjct 110839 GCGGTACAGTCCTGTTCCACGATGACCGACAGGTAGTACCGGTTTGCTTGTTGGCTGATT 110898 Query 162330 GTGCCACTTT------TAACTTTCACAT-TTGTT--GGTATATATCCAAACTCTTTTAAT 162380 |||||||| | || ||| ||| |||| || ||||| || ||||| | | Sbjct 110899 GTGCCACTCTTTATGCTATGTTTGTCATCGTGTTTAGGAATATAGCCTTTTTCTTTCAGT 110958 Query 162381 CTCATCCAA--CCAAGAGTAGGTATTTTTACTCTAT-AC-CTTTCAATAGTCCAAT-CAG 162435 | | |||| | ||||| || | ||||| | || || || ||| | | | Sbjct 110959 TTTACCCAATTCAAAGAG--GGAACTTTTATCCGATGACGCTCACAACGGATGATTGTCT 111016 Query 162436 TTTTATTGTTCTTTGGAAAATA-AGCTTTAACATCTTGGTTTTTCTTTTTCTTAAATTTA 162494 |||||| |||||| ||||| | | | |||||||||| ||||| || ||||||||| Sbjct 111017 TTTTATCGTTCTTCACGAAATACATCGAT-ACATCTTGGTGCTTCTTCTTTTTAAATTTA 111075 Query 162495 GGGAATCCACTTAAGCCTTTGAAAAACTTCTTAAATGCTTTTTCTCCATTCATTATAGAT 162554 || || | | |||| ||||| || |||| ||||||||| | ||| || | Sbjct 111076 GGAAAATTAGCTTTTCCTTGAAAAAAATTTCTAAAGGCTTTTTCTGTCTCCATAATCGCA 111135 Query 162555 TGTTTGGTAGCTTTTGAAGAAACTTCTTTAATCCAAATTTTATCTTGATTATTAGGAATA 162614 ||||| || | || | | |||| |||| ||||| || || ||| ||| || ||||| Sbjct 111136 TGTTTCGTTGACTTCGCATAAACAGCTTTGATCCACATCTTGTCTGGATGGTTGGGAATG 111195 Query 162615 TATTCATTATTTAACCATTTAGAAAATTGCATACCACTTATAAATTTATTTTCTTTTTCA 162674 || || ||||| ||||| || ||||| | ||||| | |||||| || || | Sbjct 111196 TAGTCGTTATTCAACCACTTTGAAAAATCTATACCTGAGACAAATTTCCCACCTGATTTA 111255 Query 162675 TAAATTGCTTTATTATGAGCTATATAAAAATTATAAATAAATCTACTAACTCCAATAGTT 162734 || | | ||| || || |||||||| || | | ||| | | ||| ||||| ||| Sbjct 111256 TAGACTTCTTGGTTGTGGTAAATATAAAAGTTCTTTACAAAACGAGCAACACCAATGGTT 111315 Query 162735 TTATGAATTTTTATACTTTGTTCTTGAGTTGGTTTTATCTCCACTTTGTAAGCTCTTAAC 162794 || ||| || | ||||||||| ||||| || || |||||| || |||| Sbjct 111316 CGATTAATGATT-TTTTTTGTTCTTCTGTTGGAAGAATTTCTGTTTTGTACGCCACTAAC 111374 Query 162795 AATTTCATCATCCTCCTTAAtttttttCTTATATTT 162830 | || |||| ||| | ||| | ||| ||||| || Sbjct 111375 ATCTTTATCA-CCT--TCAATCTCTTTATTATACTT 111407 >seq7224 Length=121733 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38528 TAAAAAAG-AATTTACATGGTTAAAAGAAGTTGATAGTTTAGCTTTAGCTAATGCTCAAA 38586 |||||||| ||| | | | ||||||||||| ||||||||||| ||||| ||||| ||| Sbjct 66172 TAAAAAAGCAATATCCGTTTTTAAAAGAAGTCGATAGTTTAGCCTTAGCGAATGCCCAAT 66231 Query 38587 TGAATTTAGATAAAGCTTATAAAAATTTCTTTCGAGATAAATCAATGGGCTTTCCTAAGT 38646 | || || ||| || | | |||| ||| || ||| |||| || || Sbjct 66232 TAAACTTGGATCGTGCATTTCGTAATTATTTTAAAGGACGCGCAA---GCTTCCCCAAAC 66288 Query 38647 TCAAAAGTAAGAAGAGTAATAGATTTTCTTATACAACTAATAATCAAAAAGGAACAGTTT 38706 | |||| ||| || |||| | | || ||||| || |||||||||||||||||| | | Sbjct 66289 TAAAAAATAAAAAAAGTATTTGGCAGTCGTATACGACGAATAATCAAAAAGGAACAATCT 66348 Query 38707 ACATTGAAGATAGATATATCAAACTTCCTAAGTTAAAA 38744 | | ||||| | ||| ||||| | || ||| ||||| Sbjct 66349 ATTTAGAAGAAACATACCTCAAATTGCCAAAGCTAAAA 66386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592868861039520