Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_007917.1 Length=53325 Score E Sequences producing significant alignments: (Bits) Value seq7607 223 1e-53 >seq7607 Length=81728 Score = 223 bits (246), Expect = 1e-53 Identities = 453/659 (69%), Gaps = 18/659 (3%) Strand=Plus/Minus Query 420 TTCGTAGAATGGATTTTAGGTaaaaataaaaatgaaaaaaTAATGACTGGTAGTTATAAT 479 || || |||||||| ||||| || || | | | ||||| |||||||| ||||| Sbjct 69480 TTTGTCGAATGGATATTAGGGAATGATCATAGCAAGAAAATTATGACTGGATCATATAAC 69421 Query 480 GAGACTCTTTCAACTATGTTTTCAAAGAATGTTAGAAATGCTATTCAAGAGGAAAAAGCT 539 ||||| || || || | ||||| |||||||| ||||| | || ||||| | |||||| Sbjct 69420 GAGACACTATCGACCGTATTTTCCAAGAATGTGAGAAACACAATCCAAGAAGTAAAAGCC 69361 Query 540 GATATAGACACTATTATTTATAGCGATATATTTCCTAACACAAAAATCAAACACGGTGAT 599 |||| ||| | || | || |||||| ||| | | || || ||| | |||||| Sbjct 69360 GATAAAGATATGATAGTCTACTCCGATATTTTTGATG---CGAAGATAAAATATGGTGAT 69304 Query 600 GGAGCTATGAATTTATGGTCATTGGAAGGTGGTTATAATAATTATTTGGCGACCTCTCCG 659 |||||||||||| | ||| ||||||| ||| |||||||| || |||| || || || Sbjct 69303 GGAGCTATGAATCTTTGGAGTTTGGAAGATGGCTATAATAACTACCTGGCCACATCGCCA 69244 Query 660 AGTGGTACAGC-ACAGGCTTTGGATGTTCTC-TGATGATTGTAGATGACTTAATTAA-AA 716 | ||||||||| || || ||||| || | | || || | |||||| |||| || || Sbjct 69243 ACTGGTACAGCTACTGGTTTTGG-TGCAGACATAATTATCATTGATGACGTAATCAAGAA 69185 Query 717 TGCAGAGGAAGCTTACAATGAGAATGTTCTTGAAAAACATTGGGATTGGTTTACTAATAC 776 ||||| ||||| |||| | ||| | || ||||||||||| |||||| ||||| Sbjct 69184 CGCAGATGAAGCAAACAACGCTGCAGTTTTGGATAAACATTGGGAATGGTTTGTAAATAC 69125 Query 777 TATGCTATCAAGGCTTGA-AGAAGGCGGAAAAATAATAATTATAATGACTAGATGGTCGA 835 ||||||||| | ||||| || | ||| || || || || | |||||||||||| | Sbjct 69124 TATGCTATCCCGTCTTGAGAGCAA-CGGTAAGATCATTATCAACATGACTAGATGGCATA 69066 Query 836 GCAAAGATTTAGCAGGTAGGGCACTAGA-ACATTACAAAGAAGAAGGCAAGAAAGTAAGA 894 |||| ||||| |||||||| || || | ||| | | || || | || || | Sbjct 69065 GCAATGATTTGGCAGGTAGAGCGTTAAAGGAATTGCCACTTAG-CGGGTATAAGGTTAAG 69007 Query 895 CATATTAATATGAAAGCATTACAGGAAGATGGCAA---CATGCTTTGTGAAGAAGTATTA 951 |||||||| | |||| | | ||| | | | |||||||| ||||| | || Sbjct 69006 CATATTAACTTTCAAGCGTATGATGAAAAAAACGATCGGATGCTTTGCGAAGA--TGTTC 68949 Query 952 TCTCTAAATAG--TTATAAATCAAAAGTAAGAGCTATGGGCGAGGATATTGCGAGTGCTA 1009 | ||| | || ||| |||| | | | ||||| | ||| || || || || | Sbjct 68948 TTTCTTATGAGGATTACCTGCGTAAAGCTAAAACGATGGGTGCGGACATCGCTAGCGCCA 68889 Query 1010 ACTATCAACAAGAGCCTATTGACTTAAAAGGATGCTTGTACACTAGATTTAAGACGTAT 1068 |||| |||||||||||||| ||| | ||||| | |||||| | || ||||| ||| Sbjct 68888 ACTACCAACAAGAGCCTATCGACATTAAAGGGAGATTGTACGGTGAGTTCAAGACTTAT 68830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170194244947896