Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq11297 544 1e-149
>seq11297
Length=12984
Score = 544 bits (602), Expect = 1e-149
Identities = 1109/1624 (68%), Gaps = 45/1624 (3%)
Strand=Plus/Minus
Query 61830 TTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGAT 61889
|||||||| | ||||| | || || ||||| | | | ||| ||||| || |||| |
Sbjct 12755 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 12696
Query 61890 AGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGG 61949
|||||||||| ||||||| || | |||| ||| ||||| || ||| |||||
Sbjct 12695 AGTACATTCCTGTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 12636
Query 61950 AATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCC 62009
||| | || | || | ||| || || | ||||||||||||||| || || ||||| |
Sbjct 12635 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGATCTATAAAAGCTCCTC 12576
Query 62010 TGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACT 62068
| || || ||||| | ||| || || ||| ||| ||||| | ||||| || || |
Sbjct 12575 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 12516
Query 62069 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCCATAATC 62125
| |||| | |||| |||| ||| | |||| | || |||||| | |||||
Sbjct 12515 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 12457
Query 62126 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGA 62185
||| || || || |||| ||| || | | || ||| | | || ||||| |
Sbjct 12456 AGATTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGG 12397
Query 62186 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 62245
|| ||||| ||||||||||||| || ||||| | ||||||||| ||| | |||
Sbjct 12396 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGT 12337
Query 62246 TCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 62305
|| | ||| ||| | || || | |||||| ||||| || |||||||||||||| || | |
Sbjct 12336 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATC 12277
Query 62306 AATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCC 62363
|||| | ||| | | ||| ||||| || || || ||||| || |||| | ||
Sbjct 12276 AATAGAGAATTGCGCAAACC--ATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCC 12219
Query 62364 AAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTAC 62422
|||| || | || || || ||||| | || || | ||
Sbjct 12218 AAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGAC 12159
Query 62423 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62482
||| ||||||| ||| | ||||| || ||||||| ||||||||| || ||||||
Sbjct 12158 TC-CCTTGATATGTACTGTACGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAAT 12100
Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCA 62542
||||| |||||||| ||||| || || | | ||| ||| | |||| | || ||
Sbjct 12099 GCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCG 12040
Query 62543 AATGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 62601
| | ||| | | | | | |||||| ||||| | || |||||||||||||| |||||
Sbjct 12039 TAAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGG 11981
Query 62602 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62661
|||||||||| |||| || ||| ||||| || | ||||||| |||||| ||| ||||
Sbjct 11980 TCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAAC 11921
Query 62662 TTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA 62718
||| || | |||| | ||||| ||||| | || || | ||| ||||| |||
Sbjct 11920 TTTGTTTAAATTTTGAGTTACAAT--CTTTGTG-ATTTCTTTTAATTTTTTAAAATTAAA 11864
Query 62719 TCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTC 62778
|| || | ||||||||||| | ||| | || || || || || || || || ||
Sbjct 11863 TCTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTC 11804
Query 62779 ATTAGCATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCC 62835
|| | || | | ||||| | | ||||||||||||||| ||||| || || || ||
Sbjct 11803 AT---CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCC 11747
Query 62836 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 62895
| ||||| ||||||||||||| ||||||| ||||||||||| | ||| |||| |||||
Sbjct 11746 AAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACC 11687
Query 62896 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 62955
||| || | || | ||||||||| | ||||| | || |||| | | | | |||
Sbjct 11686 AGTCTCCACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTT--GTTTT 11629
Query 62956 GTATCTCTTTTCTCTT--TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 63013
|| || ||| |||| || ||| | ||| | | ||| || || ||||| || ||
Sbjct 11628 ATAAATCGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCA-AAGCA 11570
Query 63014 TTGTCC-AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC-- 63070
| | || |||||||| |||| |||||||| | ||| || ||||||||
Sbjct 11569 GTCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACT---TCATCCTTTTC 11513
Query 63071 -ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63129
|||| ||||||||| ||||| || ||||| | ||| ||| || ||||| | |||
Sbjct 11512 TACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCAT 11453
Query 63130 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63189
||| || || ||||| ||||| || | ||| | ||| | | ||||| | |||||| ||
Sbjct 11452 TTCTTCCTTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGG 11393
Query 63190 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63249
|| || || || || | | || || ||||||||||| || ||||||| ||||| ||
Sbjct 11392 CTCTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGC 11333
Query 63250 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGA 63309
||| || ||||| |||||||||||||| | | |||||| || ||||| || || |
Sbjct 11332 GGTATTGTTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGC 11273
Query 63310 GATATAGCTTCCACTG-GCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCA 63365
|| || || ||| || | || || || || || |||||| || || ||
Sbjct 11272 TATGTAAGAACC-CTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCACCAGCAG 11217
Query 63366 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCA 63425
|||||| |||||||| ||| ||||||| |||||| | || || || || ||||||||
Sbjct 11216 ATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCATCTT 11157
Query 63426 TCAT 63429
||||
Sbjct 11156 TCAT 11153
Score = 102 bits (112), Expect = 1e-16
Identities = 89/111 (80%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 63610 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63669
||| |||||||| |||||||| || ||| ||||||||||||| |||||||||||||||||
Sbjct 10640 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 10581
Query 63670 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63720
| ||| |||| || |||| ||| | |||| | ||| ||||| | |||
Sbjct 10580 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 10530
Score = 100 bits (110), Expect = 4e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 63821 TTTTTTGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCC 63880
|| || || ||||| |||| ||| |||| |||||||| || || | ||||||||||||
Sbjct 9881 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 9822
Query 63881 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 63940
||||| | ||| || ||| ||||||||||| || || ||| | || | || | |||
Sbjct 9821 GGATGATCTGTGGTCTTAGTAGCTGCTATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 9762
Query 63941 GTTACACCATTATATATTCC 63960
||||||||| |||||| ||
Sbjct 9761 GTTACACCAGAATATATGCC 9742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632364070686400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |