Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_008364.1 Length=26537 Score E Sequences producing significant alignments: (Bits) Value seq1464 129 1e-25 seq3145 93.3 7e-15 >seq1464 Length=66918 Score = 129 bits (142), Expect = 1e-25 Identities = 172/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 4703 TTTACTTTAGCCGTAAACCGTAACTATAAAAACGACCAAGGACAACGCGAAGCCGACTTT 4762 || |||||||| || || ||||||| | | | | | || | || || || || ||| Sbjct 17938 TTCACTTTAGCTGTCAATCGTAACTTCACGAGCCAAAACGGCAACCGTGAGGCGGATTTT 17997 Query 4763 ATTAATGTTGTAATCTGGCGAAAGCAAGCCGAATTATTGGCACAGTATGCAACTAAAGGG 4822 |||||| ||| || |||||||| ||| ||| | | ||| | |||||| |||||| Sbjct 17998 ATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACACTAGCAAACTATGCACATAAAGGA 18057 Query 4823 GCTTTAATTGGAATTACGGGACGTATTCAAACAAGAAACTATGAAAATCAACAAGGTCAA 4882 || | | || | || || ||||||||||| | ||||| ||||||||||| ||| Sbjct 18058 ACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGTTCTTATGATAATCAACAAGGACAA 18117 Query 4883 CGTATTTATGTAACCGAAGTTGTAGCCGATAACTTCCAATTATTAGAAAGCCGCGGAGC 4941 ||| | || ||||| ||||| || || || |||||||||||||| ||||| || | ||| Sbjct 18118 CGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTCCAATTATTGGAAAGTCGTGCAGC 18176 >seq3145 Length=45091 Score = 93.3 bits (102), Expect = 7e-15 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 4742 GGACAACGCGAAGCCGACTTTATT-AATGTTGTAATCTGGCGAAAGCAAGCCGAATTATT 4800 ||| | || ||||| ||||| || ||||| || || ||| | || | ||| ||| | | Sbjct 1917 GGAGAGCGTGAAGCAGACTTCGTTCAATGT-GTGATTTGGAGGAAACCAGCGGAAACACT 1975 Query 4801 GGCACAGTATGCAACTAAAGGGGCTTTAATTGGAATTACGGGACGTATTCAAACAAGAAA 4860 ||| | ||||| | || | || | || | || ||||| ||||||||| | Sbjct 1976 GGCTAATTATGCTCGCAGGGGAACCTTGCTAGGCGTGACCGGACGAATTCAAACACGTTC 2035 Query 4861 CTATGAAAATCAACAAGGTCAACGTATTTATGTAACCGAAGTTGTAGCCGATAACTTCCA 4920 ||||| ||||| ||||| |||||| |||||||||| ||||||||||| || || || || Sbjct 2036 TTATGACAATCAGCAAGGGCAACGTGTTTATGTAACGGAAGTTGTAGCAGAGAATTTTCA 2095 Query 4921 ATTATTAGAA 4930 ||| || ||| Sbjct 2096 ATTGTTGGAA 2105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 84643037638000