Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq95541 161 1e-34 seq51471 141 1e-28 seq14292 136 4e-27 seq73625 132 5e-26 seq19121 132 5e-26 seq30385 129 7e-25 seq7744 127 2e-24 seq99254 84.2 2e-11 seq2524 84.2 2e-11 >seq95541 Length=3042 Score = 161 bits (178), Expect = 1e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 ||||||||||| || || || || | ||| |||||||| || | |||||||||||||||| Sbjct 1465 TCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCA 1524 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 || || || || |||||||| || || || |||||||| || | |||||||| |||| Sbjct 1525 AAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGCAATTATACGTTCTCCAAAT 1584 Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313 | || | || |||| |||||| | ||| ||||| || || || ||||||| ||| ||| Sbjct 1585 GTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGT 1644 Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATC 93342 || ||||| || || || |||| | |||| Sbjct 1645 AGAGTTTCAATTGCATTGAATAAGAAATC 1673 Score = 159 bits (176), Expect = 4e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414 ||| | ||| ||||| || ||||| | ||| ||||| || ||||| ||||| ||||| || Sbjct 2365 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 2424 Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 |||||| || || ||||| || || ||||| || | || || ||||| || || | ||| Sbjct 2425 AATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTC 2484 Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 || | || ||||| || |||||||| || |||||||| || || || | |||||| || Sbjct 2485 CACCAAGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGAT 2544 Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570 ||||||||||||| |||||| | | |||||||| Sbjct 2545 AAAATGTTTCTCACAATCTTTTAATGTCTCCCAATC 2580 Score = 125 bits (138), Expect = 8e-24 Identities = 107/132 (81%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 93590 TCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCT 93649 || |||||||| ||||||||||||||||||| |||||||| ||||| | |||||| ||| Sbjct 2747 TCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATATATCT 2806 Query 93650 TGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGT 93709 ||||||| ||||| ||||| || ||||| ||||||| || | | | || || ||| Sbjct 2807 GGATATTGGATTGGGAATATTACGAAACGTCTAGGGTTTTCCCTCAACAGGGGTTCAAGT 2866 Query 93710 TGTGGGTCAAAC 93721 |||||||||||| Sbjct 2867 TGTGGGTCAAAC 2878 >seq51471 Length=3672 Score = 141 bits (156), Expect = 1e-28 Identities = 97/107 (91%), Gaps = 3/107 (3%) Strand=Plus/Minus Query 126247 TTTTGCGCTTCTATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATC 126306 |||||| ||| ||| || |||||||||||||||||||||||||||||||||||||| || Sbjct 427 TTTTGC-CTTATATAAACCGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTC 369 Query 126307 TGGTTCCC--TCGGGAGCGTGGGTTCGAACCCCACACCTGACAAATT 126351 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 368 TGGTTCCCGAGAGGGAGCGTGGGTTCGAACCCCACACCTGACAAATT 322 >seq14292 Length=8575 Score = 136 bits (150), Expect = 4e-27 Identities = 83/87 (95%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||| Sbjct 5467 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGC 5408 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 5407 GTGGGTTCGAACCCCACACCTGACAAA 5381 >seq73625 Length=635 Score = 132 bits (146), Expect = 5e-26 Identities = 82/87 (94%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 238 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGGGGGAGC 297 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 298 GTGGGTTCGAACCCCACACCTGACAAA 324 >seq19121 Length=4604 Score = 132 bits (146), Expect = 5e-26 Identities = 90/99 (91%), Gaps = 4/99 (4%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| Sbjct 2064 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCAATTGGGAGCG 2005 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATTGGAAT 126362 ||||||||||||||||||||||| |||| | |||||| Sbjct 2004 TGGGTTCGAACCCCACACCTGAC--ATTAAAAGTGGAAT 1968 >seq30385 Length=1012 Score = 129 bits (142), Expect = 7e-25 Identities = 80/85 (94%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 466 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGGGAGGGAGCG 525 Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348 ||||||||||||||||||||||||| Sbjct 526 TGGGTTCGAACCCCACACCTGACAA 550 >seq7744 Length=9171 Score = 127 bits (140), Expect = 2e-24 Identities = 79/84 (94%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 2122 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGGGAGGGAGCG 2063 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 2062 TGGGTTCGAACCCCACACCTGACA 2039 >seq99254 Length=1028 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 162741 AATCAGAATTACCTCTTGTGAGAATCGAACTCACGACAACCGGCGTATAAGACCGATGCT 162800 ||| |||||| ||||||||||| || ||||||||||| | || || |||||| |||| Sbjct 731 AATGAGAATTGCCTCTTGTGAGGATTGAACTCACGACCCCTGGTTTACAAGACCAGTGCT 790 Query 162801 CTAACCACTGAGCTAAAGAGGCT 162823 || ||||||||||||||||||| Sbjct 791 CT-GCCACTGAGCTAAAGAGGCT 812 >seq2524 Length=3510 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 162741 AATCAGAATTACCTCTTGTGAGAATCGAACTCACGACAACCGGCGTATAAGACCGATGCT 162800 ||| |||||| |||||||||||| | ||||||||||| | || || |||||| |||| Sbjct 2704 AATGAGAATTGCCTCTTGTGAGATTTGAACTCACGACCCCTGGTTTACAAGACCAGTGCT 2645 Query 162801 CTAACCACTGAGCTAAAGAGGCT 162823 || ||||||||||||||||||| Sbjct 2644 CT-GCCACTGAGCTAAAGAGGCT 2623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555746493696160