Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_008721.2 Length=36019 Score E Sequences producing significant alignments: (Bits) Value seq1539 145 2e-30 seq1464 138 3e-28 seq3145 129 1e-25 seq14859 95.1 3e-15 >seq1539 Length=57711 Score = 145 bits (160), Expect = 2e-30 Identities = 178/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 19536 GCTGTTGCGACTTTTACTCTAGCAGTTAACCGCAATTTTAAAAATCAAAACGGTGAGCGT 19595 || || || |||||||| |||| ||||| |||||||||| ||||||||||| | || Sbjct 16101 GCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGA 16042 Query 19596 GAAGCGGACTTTATCAACGTAGTCATTTGGCGTCAGCAAGCCGAAAACTTGGCGAACTGG 19655 ||||| || |||||||| || ||||||||| | | ||| |||| |||| | | Sbjct 16041 GAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAACGATGGCTACATTA 15982 Query 19656 GTTAAGAAAGGTGCTCTGATTGGAATTACAGGTCGCATTCAGACTCGTAGCTATGACAAT 19715 | ||| || ||| | | || || | || || ||||| || || | |||||||| Sbjct 15981 GCTAAAAAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAACGCGGACTTATGACAAC 15922 Query 19716 CAGCAAGGGCAACGTGTCTACGTTACTGAGGTAGTTGCAGAAAGTTTCCAACTCTTGGAA 19775 |||||||| || ||||||||||| ||||| || || || || | ||||||||| || ||| Sbjct 15921 CAGCAAGGACAGCGTGTCTACGTGACTGAAGTTGTGGCCGATAATTTCCAACTATTAGAA 15862 Query 19776 AGT 19778 ||| Sbjct 15861 AGT 15859 >seq1464 Length=66918 Score = 138 bits (152), Expect = 3e-28 Identities = 225/322 (70%), Gaps = 4/322 (1%) Strand=Plus/Plus Query 19461 ATTATGATTAACAATGTAGTACTAGTGGGTCGCATGACTCGTGATGCAGAACTTCGTTAT 19520 ||| ||||||| || || |||||||| || || |||| ||| |||| | || ||| Sbjct 17851 ATTTTGATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATAT 17910 Query 19521 ACTCC--GTCAAACCAGGCTGTTGCGACTTTTACTCTAGCAGTTAACCGCAATTTTAAAA 19578 || | || || ||||| || || || ||| |||| || || || || || | | Sbjct 17911 ACATCAAGTGGCACT--GCTGTAGCAACGTTCACTTTAGCTGTCAATCGTAACTTCACGA 17968 Query 19579 ATCAAAACGGTGAGCGTGAAGCGGACTTTATCAACGTAGTCATTTGGCGTCAGCAAGCCG 19638 |||||||| | ||||| ||||| ||||| || || |||||||| | ||| | Sbjct 17969 GCCAAAACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAG 18028 Query 19639 AAAACTTGGCGAACTGGGTTAAGAAAGGTGCTCTGATTGGAATTACAGGTCGCATTCAGA 19698 ||| | || |||| | | ||||| |||| | || | || ||||| ||||| | Sbjct 18029 AAACACTAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAA 18088 Query 19699 CTCGTAGCTATGACAATCAGCAAGGGCAACGTGTCTACGTTACTGAGGTAGTTGCAGAAA 19758 | ||| ||||| ||||| ||||| |||||||| ||||| || || |||||||| |||| Sbjct 18089 CGCGTTCTTATGATAATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAA 18148 Query 19759 GTTTCCAACTCTTGGAAAGTCG 19780 |||||| | ||||||||||| Sbjct 18149 ACTTCCAATTATTGGAAAGTCG 18170 >seq3145 Length=45091 Score = 129 bits (142), Expect = 1e-25 Identities = 243/350 (69%), Gaps = 8/350 (2%) Strand=Plus/Plus Query 19449 GAAGGTGGAAAAATTATGATTAACAATGTAGTACTAGTGGGTCGCATGACTCGTGATGCA 19508 ||| | ||||||| ||||||||||||||| |||| || || | || || | Sbjct 1779 GAAAGAGGAAAAAATATGATTAACAATGTGACTTTAGTAGGACGTTTAACGAAAGACCCT 1838 Query 19509 GAACTTCGTTATACT--CCGTCAAACCAGGCTGTTGCGACTTTTACTCTAGCAGTTAACC 19566 || | || ||||| | || || ||| ||| || || ||||| || |||||||| | Sbjct 1839 GATTTGCGCTATACGAGCGGTGGAAA-AGG-TGTGGCTACATTTACCCTTGCAGTTAATC 1896 Query 19567 GCAATTTTAAAAATCAAAACGGTGAGCGTGAAGCGGACTTTAT-CAACGTAGTCATTTGG 19625 | || |||| |||||| ||| ||||||||||| ||||| | ||| || || |||||| Sbjct 1897 GAAACTTTACCAATCAAGCCGGAGAGCGTGAAGCAGACTTCGTTCAATGT-GTGATTTGG 1955 Query 19626 CGTCAGCAAGCCGAAAACTTGGCGAACTGGGTTAAGAAAGGTGCTCTGATTGGAATTACA 19685 | | | ||| |||| |||| || | | | | || | || | || | || Sbjct 1956 AGGAAACCAGCGGAAACACTGGCTAATTATGCTCGCAGGGGAACCTTGCTAGGCGTGACC 2015 Query 19686 GGTCGCATTCAGACTCGTAGCTATGACAATCAGCAAGGGCAACGTGTCTACGTTACTGAG 19745 || || ||||| || ||| |||||||||||||||||||||||||| || || || || Sbjct 2016 GGACGAATTCAAACACGTTCTTATGACAATCAGCAAGGGCAACGTGTTTATGTAACGGAA 2075 Query 19746 GTAGTTGCAGAAAGTTTCCAACTCTTGGAAAGTCGCGGGCAACAATCGAA 19795 || || ||||| | ||| ||| | |||||| || |||||||| |||| Sbjct 2076 GTTGTAGCAGAGAATTTTCAATTGTTGGAA--TCTAAGGCAACAAGCGAA 2123 >seq14859 Length=68005 Score = 95.1 bits (104), Expect = 3e-15 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 18758 AAGAAAGGTATGGATGGAAGTCAGATTACAGGAACCGCATCCAGTTACGCTCGTAAATAT 18817 |||||||| ||||||| ||| ||||| ||||| || || ||| ||||| |||||| Sbjct 14689 AAGAAAGGAATGGATGATTCTCAAATTACTGGAACGGCTTCATCTTATGCTCGGAAATAT 14748 Query 18818 GCTCTTAACGGCTTGTTTGCCATTGATGATAACAAGGATCCTGATACGGATGAATATGCT 18877 || | || || ||||| |||||||||| || ||| |||| || |||||||||||| Sbjct 14749 GCGATGAATGGTTTGTTCTTAATTGATGATACAAAAGATGCTGACACAGATGAATATGCT 14808 Query 18878 AACCAAA 18884 || |||| Sbjct 14809 AAACAAA 14815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114920320668648