Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq16183 187 5e-42 seq32113 178 2e-39 seq29762 145 1e-29 seq48995 143 5e-29 seq1641 134 3e-26 >seq16183 Length=3749 Score = 187 bits (206), Expect = 5e-42 Identities = 181/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || ||||| || ||||| | || || || || ||||| ||||| || | Sbjct 851 TTCCACCCCGTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTG 910 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | ||||||||| | ||||| |||||||| || ||||||||||| || || | Sbjct 911 ACAGCGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAG 970 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 ||||||||||||||||||| ||||||||||| ||| ||||| || || | | ||| | Sbjct 971 GAATGCCTTCCTTGTCTTGTATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCA 1030 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||||| ||||||||||| || || | || || ||||| || ||||| ||| Sbjct 1031 CTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATGATG 1083 Score = 138 bits (152), Expect = 2e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || || | ||| || |||| || || || || || || || || || || ||||| | Sbjct 178 AGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTACGT 237 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || || || || || ||||||||||| || ||||| |||||| Sbjct 238 CCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCC 297 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 || |||||||| || ||||| || ||||| ||||| | | || ||||||| ||| Sbjct 298 TTATCTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTG 357 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || || || || ||||| || ||||| |||||| Sbjct 358 ATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 396 Score = 127 bits (140), Expect = 4e-24 Identities = 127/165 (77%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 68297 TGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAAT 68356 ||| | ||||||||| | || || || ||||| || ||||||||||| || || ||||| Sbjct 3 TGTGCGCCCATCTTCCAGTTGTTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGGGGAAT 62 Query 68357 GCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTC 68416 |||||| ||||| |||||||||||||| || ||||| ||||| | | ||| ||||| Sbjct 63 GCCTTCTTTGTCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTC 122 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || ||||| || || || || || || || || ||||| Sbjct 123 TAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 167 >seq32113 Length=13445 Score = 178 bits (196), Expect = 2e-39 Identities = 190/250 (76%), Gaps = 1/250 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || ||||| |||||||||||||| || || || |||||||| || ||||| || | Sbjct 7562 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAG 7621 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | || ||||| || ||||| || ||||| || | | |||||| || || | Sbjct 7622 AAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 7681 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||||||||||||||||||||| || || || || || || || || | | ||| | Sbjct 7682 GAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAA 7741 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTAT-TA 68471 ||||||| || |||||||| ||||| || || || || || ||||||||| || ||| | Sbjct 7742 CTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGATATCTG 7801 Query 68472 TACCCAAGTA 68481 || | ||||| Sbjct 7802 TAACAAAGTA 7811 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | ||||||||| || ||||||||||| ||||| || || || || Sbjct 6424 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGAC 6483 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| || ||||| || || | |||||| || || ||| Sbjct 6484 AGGGTGCGGCCATCTTCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 6543 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| ||||||||||| || || || || |||||||||| || || ||| Sbjct 6544 ATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACT 6603 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || || |||||||| || || || ||||| ||||| |||||| Sbjct 6604 TCTAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 6651 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||||||| || ||||| || || || ||||| || |||||||| || Sbjct 7336 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 7395 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | |||||||| | || || || || || || || || ||||| || || ||| Sbjct 7396 AATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGA 7455 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || |||||||| ||||||||||| || ||||| ||||| | | |||||| Sbjct 7456 ATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCTACC 7515 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || |||||||||||||| || || ||||| || || ||||||||| Sbjct 7516 TCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 7563 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||| || || | || || ||||||||||||||||| || || Sbjct 5968 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 6027 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || ||||| || || ||||| || || | |||||||| || ||| Sbjct 6028 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCGAAGATTAGACGCTGTTGGTCTGGGGGA 6087 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| ||||| || ||||| ||||| | || || || Sbjct 6088 ATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACC 6147 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||| || || || || ||||| ||||| |||||||| Sbjct 6148 TCTAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 6194 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| ||| || || || || ||||||||||||||||| || || || Sbjct 6880 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 6939 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||||| |||||| || || || || || | |||||| || || ||| Sbjct 6940 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 6999 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || || ||||||||||||||||| || || |||||||| | || || || Sbjct 7000 ATACCCTCTTTATCTTGAATCTTTGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACC 7059 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || || || || || |||||||| ||||| ||||| Sbjct 7060 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 7106 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || | || ||||||||||| | ||||||||||| || || || || || ||| Sbjct 6196 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 6255 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| ||||| | |||||| || || ||| Sbjct 6256 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 6315 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || |||||||| ||||| || || || || || ||||||| | ||| ||| Sbjct 6316 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 6375 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || ||||| || || || ||||| || || |||||||| Sbjct 6376 TCTAATGTAATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 6422 Score = 152 bits (168), Expect = 9e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || || | || ||||| || || |||||||| || || || ||||| | Sbjct 6650 TTCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAG 6709 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | | || | |||||||| || ||||| || || || ||||| | |||||||| || | Sbjct 6710 ACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGGCGCTGTTGGTCTGGGG 6769 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||| ||||| ||||| || || || ||||| ||| || ||||| | || ||||| Sbjct 6770 GGATGCCCTCCTTATCTTGTATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCTA 6829 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| ||| ||||| ||||| || | || ||||| ||||| ||||| Sbjct 6830 CTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 6878 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| ||| | || || || ||||| ||||||||||| || || || Sbjct 7108 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 7167 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| || ||||| || || || || || | || || || ||||| Sbjct 7168 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 7227 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| || |||||||| || || || || || || || ||||| | | ||| ||| Sbjct 7228 ATGCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 7287 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || |||||||| ||||| || || || || || ||||| Sbjct 7288 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 7334 >seq29762 Length=2359 Score = 145 bits (160), Expect = 1e-29 Identities = 196/272 (72%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 268211 CCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGCTTCG 268270 || || || | ||| ||||||||||| | ||| ||||| |||||| || || Sbjct 1467 CCCGTGGCTACCACGAAGTCCTCTGGTGCGTCCTGCTGCAGCATGAGCCACATGGCCTCC 1408 Query 268271 ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCAT 268330 || ||||| ||||| |||||||| |||||||| ||||| ||| ||||| ||| Sbjct 1407 ACGTAGTCGCGCGCGTGGCCCCAGTCGCGCTTGCTGTCCAGGTTGCCGAGCTCGAGG--- 1351 Query 268331 TTCTGCTTG---CCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAAC 268387 | | | || ||||| | | || | || || ||||| || || |||||||| Sbjct 1350 TGCGACATGAGGCCGAGGTGTATCTTGGCGACGCCCCGCGTGATCTTGCGCGTCACGAAG 1291 Query 268388 GTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCA 268447 ||||||| || | || |||||||||||||| || | |||||||||||||||||||| Sbjct 1290 TTCTCGCCGCGGCGCGGACTCTCGTGGTTGAACAGCACCCCGTTGCACGCGAACATGCCG 1231 Query 268448 TATGCCTCACGGTAGTTCACGACCGTCCAGTA 268479 || ||||| ||||||||||| || ||||||| Sbjct 1230 TACGCCTCGCGGTAGTTCACTACGATCCAGTA 1199 >seq48995 Length=1108 Score = 143 bits (158), Expect = 5e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || |||| || ||||| | || || |||||||| || ||||| || || || || | Sbjct 209 AGACGCAGAACTAAGTGCAAAGTAGATTCTTTTTGAATATTATAGTCAGACAGAGTGCGT 150 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||||| ||| || || ||||| || || || |||||||| || ||||| |||||| Sbjct 149 CCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATACCTTCC 90 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||||||||| || ||||| || || || || || | | ||| |||||||| ||| Sbjct 89 TTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTG 30 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| || || || ||||| || || Sbjct 29 ATAGTTTTCCCAGTCAGTGTCTTTACAAA 1 >seq1641 Length=3631 Score = 134 bits (148), Expect = 3e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || || ||||||||||| || | || | || | ||||| || ||||| ||||| || Sbjct 2390 TAGTTACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAG 2331 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 || || | ||| | |||||||||| || || || || || || | | ||| ||||| Sbjct 2330 TCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCT 2271 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 |||||||| |||||||| ||||| || || || || || || || || || | | Sbjct 2270 GGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCC 2211 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || || | ||| |||||||| ||||| |||||||||||||| || |||||| || Sbjct 2210 TCGACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTG 2154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919778187496480