Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_009018.1 Length=38528 Score E Sequences producing significant alignments: (Bits) Value seq1464 131 4e-26 seq1539 120 7e-23 >seq1464 Length=66918 Score = 131 bits (144), Expect = 4e-26 Identities = 174/238 (73%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 7062 GTTTACTTTAGCAGTTAATCGTAATTTTAAAAATCAAGATGGACAAAAAGAAGCTGATTT 7121 ||| |||||||| || |||||||| || | | ||| | || | || || ||||| Sbjct 17937 GTTCACTTTAGCTGTCAATCGTAACTTCACGAGCCAAAACGGCAACCGTGAGGCGGATTT 17996 Query 7122 TATTAATTGTGTGATGTGGCGACAAGCTGCTGAAAATTTAACAAATT--GGACTAAAAAG 7179 ||||||||||||||| |||||| || | || |||| || |||| | | || | |||| Sbjct 17997 TATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACACTAGCAAACTATGCAC-ATAAAG 18055 Query 7180 GGGCATCTGATTGCGATAACAGGCCGCATCCAAACCCGTAACTATGAGAATCAACAAGGT 7239 | | ||| | | |||| || || || ||||| ||| ||||| ||||||||||| Sbjct 18056 GAAC-TCTTTTAGGTGTAACTGGTCGTATTCAAACGCGTTCTTATGATAATCAACAAGGA 18114 Query 7240 CAACGTGTTTATGTGACAGAAGTTGTTGCTGAAAGCTTCCAAATTTTAGCAAAACGTG 7297 |||||||| || || |||||||| |||||||||| ||||||| | || | || |||| Sbjct 18115 CAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTCCAATTATTGGAAAGTCGTG 18172 >seq1539 Length=57711 Score = 120 bits (132), Expect = 7e-23 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 7063 TTTACTTTAGCAGTTAATCGTAATTTTAAAAATCAAGATGGACAAAAAGAAGCTGATTTT 7122 ||||| ||||| |||||||| ||||||| |||||| | || | ||||||||||||| Sbjct 16089 TTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGAGAAGCTGATTTT 16030 Query 7123 ATTAATTGTGTGATGTGGCGACAAGCTGCTGAAAATTTAAC-AAATTGGACTAAAAAGGG 7181 || ||||||||||| ||||| || | || |||| | | | ||| | |||||||||| Sbjct 16029 ATCAATTGTGTGATTTGGCGTAAACCAGCGGAAACGATGGCTACATTAG-CTAAAAAGGG 15971 Query 7182 GCATCTGATTGCGATAACAGGCCGCATCCAAACCCGTAACTATGAGAATCAACAAGGTCA 7241 | | || | | || || || ||||| || | ||||| || || ||||| || Sbjct 15970 TAGTTTAATCGGCGTCGTCGGACGGATTCAAACGCGGACTTATGACAACCAGCAAGGACA 15911 Query 7242 ACGTGTTTATGTGACAGAAGTTGTTGCTGAAAGCTTCCAAATTTTAGCAA 7291 ||||| || ||||| |||||||| || || | |||||| | |||| || Sbjct 15910 GCGTGTCTACGTGACTGAAGTTGTGGCCGATAATTTCCAACTATTAGAAA 15861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122933857939920