Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq20 212 5e-50
seq350 152 4e-32
seq32113 111 1e-19
seq16183 89.7 4e-13
seq8075 87.8 1e-12
>seq20
Length=148542
Score = 212 bits (234), Expect = 5e-50
Identities = 234/312 (75%), Gaps = 0/312 (0%)
Strand=Plus/Minus
Query 86305 TGTGTTCCTCaaaaaactaaaaaCTAACAAATTTACAGATGACATTGACTATTTAATTTT 86364
||||||| | || ||||| ||||| ||||| || || || |||||||||||| || ||
Sbjct 87142 TGTGTTCTTGAAGAAACTCAAAACCAACAAGTTCACCGACACCATTGACTATTTGATCTT 87083
Query 86365 GCCAAATTTCACTTTATGGGACCACAATTTTTTAGTGTTTCTCAACAAAAAATTTAATAG 86424
|||| | || | || ||||||||||||||| | | |||||||||||| || ||
Sbjct 87082 GCCACACTTTATATTGTGGGACCACAATTTTGTCATTTTTCTCAACAAAGCGTTCAACTC 87023
Query 86425 CAAAAAAGAATGCGGTCTAGTGAATATTTGGGGCGCGATGCAAAAAATATCTCTAACTCA 86484
|||| | || | | | ||| | |||| | |||| |||||||||| || || ||
Sbjct 87022 CAAACACGACAACAGCTTGGTGGACATTTCGAGCGCCCTGCAAAAAATTAAACTCACACA 86963
Query 86485 AGGCGTCATCAAAGATTTGATACAGAACAAAAACGGATACGCGGGTCAATATTTGTATTC 86544
||| |||||||||| | |||| ||||||||| ||||| | |||||||||||||||
Sbjct 86962 CGGCATCATCAAAGACCAATTGCAGAGCAAAAACGGTTACGCCGTTCAATATTTGTATTC 86903
Query 86545 GACATTTCTGAACACGGCCAGCTTCTATGCTAACGTCCAATGTTTTAATGGTATAAACGA 86604
||| ||||| ||||| ||| ||||||||| ||||| || ||||| || || | |||||
Sbjct 86902 GACGTTTCTCAACACCGCCTCCTTCTATGCCAACGTGCAGTGTTTGAACGGCGTCAACGA 86843
Query 86605 AATAATTCCGCC 86616
||| |||||||
Sbjct 86842 AATCGTTCCGCC 86831
Score = 125 bits (138), Expect = 6e-24
Identities = 145/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 220 ACTCTATTCAAAGAGATTCGTCGTATTCATCCAGACACTATGAAGCTAGTGTGCAACTGG 279
||| | |||||||||||||| | | | || ||||| |||||||| ||| |||||||
Sbjct 136713 ACTTTGTTCAAAGAGATTCGCAATGTGAAGCCGGACACGATGAAGCTGGTGCTCAACTGG 136772
Query 280 AGCGGTAAAGAGTTTCTCCGTGAAACTTGGACTCGCTTCATCAGCGAAGAG-TTTCCCAT 338
||||| ||||||||| | |||||||||||||| || ||| || | | | || ||||||||
Sbjct 136773 AGCGGCAAAGAGTTTTTGCGTGAAACTTGGACCCGTTTCGTC-GAGGACAGTTTTCCCAT 136831
Query 339 CACCACTGACCAAGAAATTATGGACTTGTGGTTTGAGCTCACACTGAGACCCATGCAGCC 398
|| ||||| || | |||||| ||| | | | ||| |||||||||| | |||
Sbjct 136832 TGTCAACGACCAGGAGGTGATGGACGTGTTTCTCGTGATCAACCTGAGACCCACTCGGCC 136891
Query 399 TAACCGTTGCTAC 411
|||||||| |||
Sbjct 136892 CAACCGTTGTTAC 136904
Score = 89.7 bits (98), Expect = 4e-13
Identities = 146/208 (70%), Gaps = 7/208 (3%)
Strand=Plus/Minus
Query 106529 CGTCTACTATGTAATCTTTGGCGTACACATCTCTCACGTACATCACATCATCCTTCCGAT 106588
|||| || | |||||| |||||||||| || | | | ||| |||||| |||| | |
Sbjct 96920 CGTC-ACCACGTAATCGCTGGCGTACACGTCGCGCGCAAACAACACATCGTCCTGCTTGT 96862
Query 106589 CGTACACCAGCTGTATGGCTCGATTGACAGTTTTTTCGTCATCATAATTACCGTACAAGA 106648
|||||||||| || ||||| ||||||| || || | || || |||||||| |
Sbjct 96861 CGTACACCAGTTGGATGGCACGATTGATGTGCTTCTCCTGGTCGACGTTGCCGTACAAAA 96802
Query 106649 ACATTCTCCTCATATTCTTGTCTCGAGGATATTGTTTATCaaaaaaaTTATGCATCAAAA 106708
|||| | | | | ||| | | | ||| |||| || ||||||| ||| |||||
Sbjct 96801 ACATACGCTTGCAA----TGTTTTGCG--TATAGTTTGTCGTAAAAATTGTGCGCCAAAA 96748
Query 106709 TATTGTTATTCATCATAATGTTAGGAAA 106736
| ||||| ||||| | |||||| |||||
Sbjct 96747 TGTTGTTGTTCATGAGAATGTTGGGAAA 96720
Score = 87.8 bits (96), Expect = 1e-12
Identities = 110/151 (73%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 105960 GCATAGAAAAAATTTCTTTCCCGCCACAGTCATTTCCCCGTGaaaaaaaCTATCTACAAA 106019
||| |||||||||||||| |||||||| ||||| || ||||| |||||||| || | |
Sbjct 97541 GCACAGAAAAAATTTCTTGCCCGCCACCGTCATCTCACCGTGGAAAAAACTGTCAATGTA 97482
Query 106020 CTTCACATAGTCCATAGTGTGCTTGAGCATATCCTGTTGTAGATTTTCATTGATCACTCG 106079
||| ||| | || | ||| ||||||| ||||| | | || ||| | | ||
Sbjct 97481 CTTGACAAAATCGCGTTTCTGCATGAGCATCTCCTGGCGCATGGCGTCGTTGGTGATGCG 97422
Query 106080 CAACACTTCGGCGCCTATGCGATACTTTAGC 106110
|| ||||||| ||| ||||| ||||| |||
Sbjct 97421 CACCACTTCGTTGCCGATGCGGTACTTGAGC 97391
Score = 86.0 bits (94), Expect = 5e-12
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 44812 ATTTGGGAAAGGGGTTACGAAGACAATTACACGTTGGGTCAGCAGATTAGCATCAGAATG 44871
|| ||||| | || ||||| |||||||||||| | || || ||| | ||||| | ||
Sbjct 101856 ATGTGGGAGCGAGGCTACGAGGACAATTACACGCTCGGCCAACAGTTGAGCATTCGCATC 101915
Query 44872 ACCACGAATCTCATACAAAGTGGGTTGGATTTTAAGCATCAA 44913
||||| || || ||||| || |||||||||||||| ||||||
Sbjct 101916 ACCACCAAACTGATACAGAGCGGGTTGGATTTTAAACATCAA 101957
>seq350
Length=11499
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3459 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 3400
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
|||||||||||||||||||||||| ||||||| |||||
Sbjct 3399 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 3362
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3459 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 3400
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
|||||||||||||||||||||||| ||||||| |||||
Sbjct 3399 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 3362
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Minus
Query 115342 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 115392
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 3521 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 3470
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Minus
Query 114145 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 114195
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 3521 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 3470
>seq32113
Length=13445
Score = 111 bits (122), Expect = 1e-19
Identities = 165/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| |||| ||| ||||| || |||||||| || |||||| || |||||||| || |
Sbjct 7107 ACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGA 7166
Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
|| || | || ||||||||||| || ||||| || || ||||||||||| ||
Sbjct 7167 CAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 7226
Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATTC 34076
| || |||||||| | | |||| |||| | | | || | |||| || |||
Sbjct 7227 GATGCCCTCTTTGT-CTTGGATTTTAGCTT--TCACATTTTCAATTGTGTCAGAAGCTTC 7283
Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
||| | || ||||||||||| || |||||||| ||||||||||||||
Sbjct 7284 AACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 7334
>seq16183
Length=3749
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/231 (69%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| ||||||||||| || |||||||| | || ||||||||||| ||||| || |
Sbjct 397 CCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 456
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| | || | || || | ||||| || ||||| || || | |||||||| ||
Sbjct 457 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 516
Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATTCG 34077
| || |||||| ||| |||||| ||||| | | || |||||| || |||
Sbjct 517 ATGCCCTCTTTATCCTGAATTTTCGCCTTAA---CATTTTCAATTGTATCAGAAGCTTCC 573
Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128
||| | || || ||||| || || |||||||| ||||| |||||||||
Sbjct 574 ACTTCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 624
>seq8075
Length=22473
Score = 87.8 bits (96), Expect = 1e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 37827 ACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCAT 37886
|| |||||| ||| |||||| | |||||||| || || ||| ||||| |||||||||
Sbjct 13339 ACACACGATGACTTATGGAACTCAGCTCAAATACAACTGGTGAAAGAGGGCAAGATGCAT 13280
Query 37887 CAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGAC- 37945
| | |||||||| ||||||||||| ||||| |||||| | | | || | ||
Sbjct 13279 GGTTTCCTACGCATGTACTGGTGCAAGAAGATTTTAGAATGGACCCA-GTCGCCCGAACA 13221
Query 37946 CGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAA 38005
|| | || | || ||||| | |||||| | ||||| | ||||| | ||||| ||
Sbjct 13220 GGCTTTGAAGTTTGCTATTTACTTGAATGATCATTACAGTGTTGACGGCAGAGATCCTAA 13161
Query 38006 CGGTTACGTCGG 38017
||||| || ||
Sbjct 13160 TGGTTATGTTGG 13149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396287721827368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |