Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_009810.1
Length=38867
Score E
Sequences producing significant alignments: (Bits) Value
seq1539 147 5e-31
seq1464 109 1e-19
seq3145 104 6e-18
seq52331 86.0 2e-12
>seq1539
Length=57711
Score = 147 bits (162), Expect = 5e-31
Identities = 231/326 (71%), Gaps = 6/326 (2%)
Strand=Plus/Minus
Query 35453 GGAGAGCAAATAATGATGAACCGTGTAGTACTT--GTAGGACGATTAACAAAAGACCCTG 35510
|||||| || |||||| || |||| |||| |||||||| ||||| ||||| || |
Sbjct 16185 GGAGAGATAAAAATGATCAATAATGTA--ACTTTAGTAGGACGGTTAACCAAAGATCCCG 16128
Query 35511 ATTTACGATATACGCCAGCTGGTGCAGCAGTTGCGACTTTTACTTTAGCTGTAAATCGCC 35570
||||||| ||||| || ||| ||||||| || |||||||| ||||| || ||||||
Sbjct 16127 ATTTACGTTATACCGCAAGTGGCACAGCAGTGGCCACTTTTACCTTAGCCGTTAATCGCA 16068
Query 35571 CATTTAAAAATACACAAGGAGAACAAGAAGCAGATTTCATTAATTGTGTTGTTTGGCGTA 35630
|||| ||| | | || | | |||||| ||||| || |||||||| |||||||||
Sbjct 16067 ATTTTACGAATCAAAACGGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCGTA 16008
Query 35631 AACCAGCGGAAAACGCAGCTAATTTCTTGAAAAAAGGAAGCATGGCAGGCGTTGATGGAC 35690
|||||||||||| |||| || ||||| || || | ||||| | ||||
Sbjct 16007 AACCAGCGGAAACGATGGCTACATTAGCTAAAAAGGGTAGTTTAATCGGCGTCGTCGGAC 15948
Query 35691 GTGTTCAAACTCGTAATTATGAGGA-CAGCGACGGTAAACGCGTTTTCGTTACTGAGGTA 35749
| ||||||| || | |||||| | |||| | || | || || | ||| ||||| ||
Sbjct 15947 GGATTCAAACGCGGACTTATGACAACCAGC-AAGGACAGCGTGTCTACGTGACTGAAGTT 15889
Query 35750 GTTGCTGAAACAGTTCAATTCTTAGA 35775
|| || || | | ||| | |||||
Sbjct 15888 GTGGCCGATAATTTCCAACTATTAGA 15863
>seq1464
Length=66918
Score = 109 bits (120), Expect = 1e-19
Identities = 208/301 (69%), Gaps = 4/301 (1%)
Strand=Plus/Plus
Query 35477 GTAGTACTTGTAGGACGATTAACAAAAGACCCTGATTTACGATATACGCCAGCTGGTGCA 35536
|| ||||| || ||||| | |||||||| || |||||||||||||| || ||| |
Sbjct 17866 GTTGTACTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACATCAAGTGGCACT 17925
Query 35537 GCAGTTGCGACTTTTACTTTAGCTGTAAATCGCCCATTTAAAAATACACAA-GGAGAACA 35595
|| || || || || ||||||||||| ||||| | || | | || || || | |
Sbjct 17926 GCTGTAGCAACGTTCACTTTAGCTGTCAATCG-TAACTTCACGAGCCAAAACGGCAACCG 17984
Query 35596 AGAAGCAGATTTCATTAATTGTGTTGTTTGGCGTAAACCAGCGGAAAACGCAGCTAATTT 35655
|| || ||||| ||||||||||| ||||||| ||| |||| |||| ||| || |
Sbjct 17985 TGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACACTAGCAAACTA 18044
Query 35656 CTTGAAAAAAGGAAGCATGGCAGGCGTTGATGGACGTGTTCAAACTCGTAATTATGAGGA 35715
| ||||||| | ||| || ||| ||| ||||||| ||| |||||| |
Sbjct 18045 TGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGTTCTTATGATAA 18104
Query 35716 -CAGCGACGGTAAACGCGTTTTCGTTACTGAGGTAGTTGCTGAAACAGTTCAATTCTTAG 35774
|| | | || |||| || | ||| || || ||||||||||||| | ||||| || |
Sbjct 18105 TCAAC-AAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTCCAATTATTGG 18163
Query 35775 A 35775
|
Sbjct 18164 A 18164
>seq3145
Length=45091
Score = 104 bits (114), Expect = 6e-18
Identities = 224/327 (69%), Gaps = 11/327 (3%)
Strand=Plus/Plus
Query 35460 AAATAATGATGAACCGTGTAGTACTT--GTAGGACGATTAACAAAAGACCCTGATTTACG 35517
||||| |||| ||| ||| |||| |||||||| ||||| |||||||||||||| ||
Sbjct 1790 AAATA-TGATTAACAATGTG--ACTTTAGTAGGACGTTTAACGAAAGACCCTGATTTGCG 1846
Query 35518 ATATACGCCAGCTGGTGCAGCAGTTGCGACTTTTACTTTAGCTGTAAATCGCCCATTTAA 35577
|||||| | ||| || || || || ||||| | || || ||||| ||||
Sbjct 1847 CTATACGAGCGGTGGAAAAGGTGTGGCTACATTTACCCTTGCAGTTAATCGAAACTTTAC 1906
Query 35578 AAATACACAAGGAGAACAAGAAGCAGATTTCATTAATTGTGTTGTTTGGCGTAAACCAGC 35637
||| | ||||| | |||||||| ||| || | ||||| ||||| | ||||||||
Sbjct 1907 CAATCAAGCCGGAGAGCGTGAAGCAGACTTCGTTCAATGTGTGATTTGGAGGAAACCAGC 1966
Query 35638 GGAAAACGCAGCTAAT--TTCTTGAAAAAAGGAAGCATGGCAGGCGTTGATGGACGTGTT 35695
||||| |||||| | || | | |||| | || |||||| ||||| ||
Sbjct 1967 GGAAACACTGGCTAATTATGCTCG--CAGGGGAACCTTGCTAGGCGTGACCGGACGAATT 2024
Query 35696 CAAACTCGTAATTATGAGGA-CAGCGACGGTAAACGCGTTTTCGTTACTGAGGTAGTTGC 35754
||||| ||| |||||| | |||| | || |||| |||| || || || || || ||
Sbjct 2025 CAAACACGTTCTTATGACAATCAGC-AAGGGCAACGTGTTTATGTAACGGAAGTTGTAGC 2083
Query 35755 TGAAACAGTTCAATTCTTAGAGCCTAA 35781
|| | ||||||| || || ||||
Sbjct 2084 AGAGAATTTTCAATTGTTGGAATCTAA 2110
>seq52331
Length=217
Score = 86.0 bits (94), Expect = 2e-12
Identities = 137/195 (70%), Gaps = 4/195 (2%)
Strand=Plus/Minus
Query 35462 ATAATGATGAACCGTGTAGTACTT--GTAGGACGATTAACAAAAGACCCTGATTTACGAT 35519
|| ||||| ||| |||| |||| |||||||| |||||||||||||||||||| || |
Sbjct 194 ATTATGATTAACAATGTA--ACTTTGGTAGGACGTTTAACAAAAGACCCTGATTTGCGCT 137
Query 35520 ATACGCCAGCTGGTGCAGCAGTTGCGACTTTTACTTTAGCTGTAAATCGCCCATTTAAAA 35579
||||| || ||| || || || |||||| ||||| || ||||| ||||| |
Sbjct 136 ATACGTCAAGTGGCAAGGCGGTAGCAGGTTTTACATTAGCAGTCAATCGAAGATTTACGA 77
Query 35580 ATACACAAGGAGAACAAGAAGCAGATTTCATTAATTGTGTTGTTTGGCGTAAACCAGCGG 35639
| |||| | | || || || | || | ||||| ||||| | ||| ||||||
Sbjct 76 ACCAGGCAGGACAGCGTGAGGCGGACTATATCCAATGTGTCATTTGGGGGAAATCAGCGG 17
Query 35640 AAAACGCAGCTAATT 35654
||| | ||| ||||
Sbjct 16 AAACCTTAGCAAATT 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124016595737832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |