Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_009812.1 Length=42653 Score E Sequences producing significant alignments: (Bits) Value seq14088 145 2e-30 seq1361 82.4 2e-11 >seq14088 Length=28720 Score = 145 bits (160), Expect = 2e-30 Identities = 238/333 (71%), Gaps = 9/333 (3%) Strand=Plus/Minus Query 26700 TCAGTACGACCAAGTAAATAATCAGTTGACACATTGAAGTAGTCAGCGACTTTC-TGAAG 26758 || || || || |||| || ||||||| ||| ||||||||| |||||||| | | | Sbjct 4219 TCTGTGCGTCCTAGTAGGTAGTCAGTTGTTACACCGAAGTAGTCGGCGACTTTTGTCAGG 4160 Query 26759 TTTATCCGATGAAGGATTGTTTTGCTTCCATGAATATATAGAATTTTTACCAAATCCAAC 26818 ||| | | | |||| | |||| ||||||||||||| | |||||| ||||| || | Sbjct 4159 TTTGCACCA-GTAGGAATATTTTTATTCCATGAATATAGAACATTTTTTCCAAAACCTAG 4101 Query 26819 ATCAGATTCTAATTTCGAAACAGGAATGCCACGTTTTTTACATAATTCTTTTACTCTATC 26878 | ||| ||||| | | || || | |||||||||||| ||||| ||| || Sbjct 4100 TTTTTCTTCCAATTTATTTATCGATATCCCTTGGTTTTTACATAATAATTTTAATCTTTC 4041 Query 26879 AAATACTGTCATTGCAACCACCTAGATAAGCATATGAAAAATA-ATTAAAGAATTTTGTA 26937 ||| || |||| |||||| || ||| | | ||||||||| | |||||| | | | || Sbjct 4040 AAAAGCTATCATAGCAACCTCC-AGAAGA-CTTATGAAAAAAAGATTAAATATATATTTA 3983 Query 26938 GAA-AATCATTGACTTCTATTGAAATCTTTAATATAATTTGTTCATAAGCTAATTATTTA 26996 || |||| ||||| || | || ||||||| ||| ||||||||||||| ||||||| Sbjct 3982 AAATAATCGTTGACAATTAAGTATATATTTAATAAAATATGTTCATAAGCTAGTTATTTA 3923 Query 26997 GCT--AAACAAGACAACAAACAACCCCATAAAA 27027 ||| |||||| || | | | || || |||||| Sbjct 3922 GCTAGAAACAAAACTAAAGAGAA-CCAATAAAA 3891 >seq1361 Length=62553 Score = 82.4 bits (90), Expect = 2e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 26709 CCAAGTAAATAATCAGTTGACACATTGAAGTAGTCAGCGACTTTCTGAAGTTTATCCGAT 26768 ||||||||||||||||||| ||||| || || ||||| ||||| |||| ||| || | Sbjct 12206 CCAAGTAAATAATCAGTTGTCACATCAAAATAATCAGCAACTTTTTGAATTTTGTCAGTA 12147 Query 26769 GAAGGATTGTTTTGCTTCCATGAATATATAGAATTTTTACCAAATCCAACATCAGATTCT 26828 ||||| || || |||||| |||||| | || | |||| | | | | | ||| Sbjct 12146 GAAGGGGTGCGTTTATTCCATTGATATATTGTGTTCCTTCCAATTTCGATTTTATCTTCA 12087 Query 26829 AATTTCGAAACAGGAATGCCACGTTTTTTACATAATTCTTTTA 26871 | || ||||| || ||||||| ||||||| || ||||| Sbjct 12086 AGTTGATAAACACTGATACCACGTTGATTACATAGTTTTTTTA 12044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136108764772920