Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_009812.1
Length=42653
Score E
Sequences producing significant alignments: (Bits) Value
seq14088 145 2e-30
seq1361 82.4 2e-11
>seq14088
Length=28720
Score = 145 bits (160), Expect = 2e-30
Identities = 238/333 (71%), Gaps = 9/333 (3%)
Strand=Plus/Minus
Query 26700 TCAGTACGACCAAGTAAATAATCAGTTGACACATTGAAGTAGTCAGCGACTTTC-TGAAG 26758
|| || || || |||| || ||||||| ||| ||||||||| |||||||| | | |
Sbjct 4219 TCTGTGCGTCCTAGTAGGTAGTCAGTTGTTACACCGAAGTAGTCGGCGACTTTTGTCAGG 4160
Query 26759 TTTATCCGATGAAGGATTGTTTTGCTTCCATGAATATATAGAATTTTTACCAAATCCAAC 26818
||| | | | |||| | |||| ||||||||||||| | |||||| ||||| || |
Sbjct 4159 TTTGCACCA-GTAGGAATATTTTTATTCCATGAATATAGAACATTTTTTCCAAAACCTAG 4101
Query 26819 ATCAGATTCTAATTTCGAAACAGGAATGCCACGTTTTTTACATAATTCTTTTACTCTATC 26878
| ||| ||||| | | || || | |||||||||||| ||||| ||| ||
Sbjct 4100 TTTTTCTTCCAATTTATTTATCGATATCCCTTGGTTTTTACATAATAATTTTAATCTTTC 4041
Query 26879 AAATACTGTCATTGCAACCACCTAGATAAGCATATGAAAAATA-ATTAAAGAATTTTGTA 26937
||| || |||| |||||| || ||| | | ||||||||| | |||||| | | | ||
Sbjct 4040 AAAAGCTATCATAGCAACCTCC-AGAAGA-CTTATGAAAAAAAGATTAAATATATATTTA 3983
Query 26938 GAA-AATCATTGACTTCTATTGAAATCTTTAATATAATTTGTTCATAAGCTAATTATTTA 26996
|| |||| ||||| || | || ||||||| ||| ||||||||||||| |||||||
Sbjct 3982 AAATAATCGTTGACAATTAAGTATATATTTAATAAAATATGTTCATAAGCTAGTTATTTA 3923
Query 26997 GCT--AAACAAGACAACAAACAACCCCATAAAA 27027
||| |||||| || | | | || || ||||||
Sbjct 3922 GCTAGAAACAAAACTAAAGAGAA-CCAATAAAA 3891
>seq1361
Length=62553
Score = 82.4 bits (90), Expect = 2e-11
Identities = 116/163 (71%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 26709 CCAAGTAAATAATCAGTTGACACATTGAAGTAGTCAGCGACTTTCTGAAGTTTATCCGAT 26768
||||||||||||||||||| ||||| || || ||||| ||||| |||| ||| || |
Sbjct 12206 CCAAGTAAATAATCAGTTGTCACATCAAAATAATCAGCAACTTTTTGAATTTTGTCAGTA 12147
Query 26769 GAAGGATTGTTTTGCTTCCATGAATATATAGAATTTTTACCAAATCCAACATCAGATTCT 26828
||||| || || |||||| |||||| | || | |||| | | | | | |||
Sbjct 12146 GAAGGGGTGCGTTTATTCCATTGATATATTGTGTTCCTTCCAATTTCGATTTTATCTTCA 12087
Query 26829 AATTTCGAAACAGGAATGCCACGTTTTTTACATAATTCTTTTA 26871
| || ||||| || ||||||| ||||||| || |||||
Sbjct 12086 AGTTGATAAACACTGATACCACGTTGATTACATAGTTTTTTTA 12044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 136108764772920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |