Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_011272.1 Length=153894 Score E Sequences producing significant alignments: (Bits) Value seq123604 93.3 4e-14 seq64495 91.5 1e-13 seq8033 89.7 5e-13 >seq123604 Length=1138 Score = 93.3 bits (102), Expect = 4e-14 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 89813 CACCA-CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGG 89871 ||||| |||| ||| | |||| |||| |||||||| ||||||||||| ||| |||||||| Sbjct 780 CACCATCGGGATGTGGCTCAGCTTGGTAGAGCGCTCGGTTTGGGACCGAGAGGTCGCAGG 721 Query 89872 TTCGAATCCTGTCACCCCGAC 89892 ||||||||||||| |||||| Sbjct 720 TTCGAATCCTGTCTTCCCGAC 700 >seq64495 Length=424 Score = 91.5 bits (100), Expect = 1e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 89817 ACGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGA 89876 ||||| |||| |||| |||| ||||| ||||||||||||||||| ||||||||||||| Sbjct 30 ACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGA 89 Query 89877 ATCCTGTCACCCCGA 89891 |||||||| ||||| Sbjct 90 ATCCTGTCTTCCCGA 104 >seq8033 Length=24764 Score = 89.7 bits (98), Expect = 5e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 89818 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 89877 |||| |||| |||| |||| ||||| ||||||||||||||||| |||||||||||||| Sbjct 40 CGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAA 99 Query 89878 TCCTGTCACCCCGA 89891 ||||||| ||||| Sbjct 100 TCCTGTCTTCCCGA 113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 491347617450560