Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq48967 82.4 6e-11 seq19174 82.4 6e-11 >seq48967 Length=9453 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||||| | || ||| | || |||||||||| || || || |||| ||||| ||||| Sbjct 4690 TGGGTACGTGACCACCGAGTCCACCACAAGTTATCGGAAACTTCGGCGGACCCTCACAAT 4749 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 || || | ||||||| |||||||| || || ||||||||||||| || |||| | Sbjct 4750 GCTCACCGTGGGTTCTTCTTCTCGCATGTAGGGTGGCTCATGATGAAGAAACACCCTCAT 4809 Query 108586 GTGATCTCGGCCGGTCGAAAAATGGACATGACGGACATAT 108625 || ||| | || ||||| || ||||| || |||| Sbjct 4810 GTTATCAGCGAAGGCAATAAAATTGATATGACCGATATAT 4849 >seq19174 Length=11924 Score = 82.4 bits (90), Expect = 6e-11 Identities = 132/189 (70%), Gaps = 3/189 (2%) Strand=Plus/Minus Query 108784 AACTTTACGTGGCTGGTCAATTCGGCGGCGCACATGTACGGCGACCGTCCGTTCGACAAG 108843 ||| | |||||||| || || || || || |||| | |||||| || | ||| || Sbjct 1027 AACGTGACGTGGCTCGTGAACTCTGCTGCTCACAAATGGGGCGACAAACCCTACGATAAA 968 Query 108844 AACATTTTCCCAAGAGAAAACAAATTGGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCAC 108903 || ||| || ||||||| | || ||| ||| || |||||||| || | ||| Sbjct 967 AATATTCAACCCTCTGAAAACATCTCCGTCTCGGTGTTTGCGCTCGGCGAAGGCTTCCAC 908 Query 108904 AACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTGGGGAACGAC---TTT 108960 ||||||||||| |||||| | ||||| ||| | || ||| |||| ||| || || Sbjct 907 AACTACCACCATACGTTCCCGTGGGACTATAAGACAGCTGAGCTGGGCAACAACAGACTT 848 Query 108961 AATTTCACC 108969 ||||||||| Sbjct 847 AATTTCACC 839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381027952200096