Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_011398.1 Length=50930 Score E Sequences producing significant alignments: (Bits) Value seq14859 224 3e-54 >seq14859 Length=68005 Score = 224 bits (248), Expect = 3e-54 Identities = 333/466 (71%), Gaps = 12/466 (3%) Strand=Plus/Plus Query 894 TGGTCAAGGAGTAGGTAAAACTGGATTAGAAAGCATT-GCAACTGTATGGTATTTAAGCA 952 ||| ||||| || || ||||| | ||||||| ||| |||| | |||| ||||| Sbjct 29701 TGGACAAGGTGTTGGGAAAACAGCATTAGAA-GCAGGAGCAATACTTTGGTTTTTAACTT 29759 Query 953 CTAGACCTTTTCCGAAAGTAGTTGCTACAGCTCCAAC-ACGACAACAATTATATGACGTA 1011 | |||| | | ||||| |||||||||| ||||| | || ||||| | || || ||| Sbjct 29760 GTCGACCATACGCTAAAGTGATTGCTACAGCGCCAACCATGA-AACAACTTTACGATGTA 29818 Query 1012 CTATGGGCTGAAATAGCTAAATGGCTAAGTAATAGCAAGGTTGAGAAGCTACTTGAGTGG 1071 || ||||| ||| ||||||||||| ||| | ||||| | | | || |||| ||||| Sbjct 29819 CTTTGGGCGGAAGTAGCTAAATGGTTAAATGATAGCTTGATCAAAAACTTACTGAAGTGG 29878 Query 1072 ACTAAAACAAAAGTGTATATGAAAGGCTTTGAAGAAAGATGGTGGGCTACAGCTAGAACA 1131 || || || ||| | |||||| || | || | |||| ||||||||||||||| Sbjct 29879 ACAAAGACCAAAATTTATATGGTTGGTGATTCTGAGCGTTGGTTTGCTACAGCTAGAACA 29938 Query 1132 GCAGTAAAGCCCGAGAATATGCAAGGTTTTCATGAAGATTATATGTTATTTGTTGTTGAT 1191 ||| ||||| || ||||||||||| ||||||||||| ||||||| ||||||| ||| Sbjct 29939 GCAACGAAGCCAGAAAATATGCAAGGGTTTCATGAAGACCATATGTTGATTGTTGTAGAT 29998 Query 1192 GAAGCTTCGGGAGTTGCTGACCCCATTATGGAAGCTATATTGGGAACATTATCAGGTGCA 1251 |||||||| || || |||| || |||||||||||||| | || || |||||||| Sbjct 29999 GAAGCTTCTGGTGTATCTGATCCAATTATGGAAGCTATTCTTGGTACGCTATCAGGTTTT 30058 Query 1252 GAAAATAAGCTTCTTTTATGCGGAAACCCAACTAGAACGAGTGGAACG----TTTTACGA 1307 || |||||||| | | || || ||||||| || | | ||| | |||||||| Sbjct 30059 GATAATAAGCTATTGATGTGTGGGAACCCAAATAATA----TTGAAGGTGTCTTTTACGA 30114 Query 1308 TAGCCATAATAGAGACAGAGATTTATATAAAACATTTAAAGTATCT 1353 | ||| ||| |||| | ||| ||| | | |||||||||| Sbjct 30115 TTCCCACAATTCAGACCGTGATAAATACAGAGTTCATAAAGTATCT 30160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162544814192736