Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_012419.1 Length=21115 Score E Sequences producing significant alignments: (Bits) Value seq14859 145 1e-30 >seq14859 Length=68005 Score = 145 bits (160), Expect = 1e-30 Identities = 280/409 (68%), Gaps = 8/409 (2%) Strand=Plus/Minus Query 9380 CTAGTGATTTGTTTAGTCCTTCAATCATCTTGGCTGTACCACGCGTAACAGCTGATTT-- 9437 |||| ||||| |||| |||||| || | | | |||||| |||||||||| ||| Sbjct 39184 CTAGGGATTTATTTAATCCTTCTATTACTTCACCAACACCACGAGTAACAGCTGTTTTTG 39125 Query 9438 CATGTTGGCTATTGCAGTACCAAAACCTTGTGTACTATCTTTAGCTATCTTTTCTAATGA 9497 ||| || || | || || || | || ||||||||| || | | |||||| Sbjct 39124 CATTCTGAATAGAG--GTTTTAATCCCCTTGGTTGAATCTTTAGCAATTTGATTTAATGA 39067 Query 9498 CTTAAGACCGCCACCACCCTCTTTATCCATTTTAACTAAGGCATCTTGGAACTGTCTTAC 9557 ||||| || || ||||| | ||||||||| | ||| || |||||||| | || Sbjct 39066 TTTAAGTCCTCCGCCACCTTTAGTATCCATTTCTATTAATTGATTTTGGAACTCTTCAAC 39007 Query 9558 AGATATACTACCTGATGACAATCCTTCTTTTAATTCACCTGTTGTCATGCCCATTTCTTT 9617 ||| || ||||| ||||| |||||||| | || || |||| || ||||| | ||| Sbjct 39006 AGAAATCTTACCTTGAGACAACCCTTCTTTAAGCTCTCCCATTGTAATTCCCATCTTTTT 38947 Query 9618 TGCTAAGGCATTAAGGGTAGGTCCTAAACCACTGTTAATCATTGAGTTCCACGTTTGCGC 9677 || | ||| || ||||| || | | ||||||||||| ||||| ||||| || Sbjct 38946 AGCGATAGCAGATAGAGTAGGACCAAGTTGAGCATTAATCATTGAATTCCAAGTTTGTGC 38887 Query 9678 ATCTACCTTACCATTTGAGAATGATTGAGATAACTGAACAACCGCACTATCAAC--CATC 9735 ||||| || || |||||||| |||||||| ||||| ||| || || || ||| Sbjct 38886 GTCTACTTTTCCGTTTGAGAAACTTTGAGATAGCTGAATAACAGCTTCATTTACTTGATC 38827 Query 9736 TGTGCATCCCCACCAAAACCTAGGATAGCATCATTCATTGCTTTAAATA 9784 || | |||||||| || || || ||| ||| | ||||||||||| Sbjct 38826 AGTTGA--ACCACCAAACCCAAGAATCCCATTATTTAATGCTTTAAATA 38780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 67324752729576