Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_012753.1 Length=37184 Score E Sequences producing significant alignments: (Bits) Value seq1539 96.9 8e-16 seq1464 91.5 3e-14 >seq1539 Length=57711 Score = 96.9 bits (106), Expect = 8e-16 Identities = 172/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 3615 GCAGTCGCATCTTTTAGCCTTGCGGTTAACCGTAATTTTAAAGACGCTAACGGAGAACGT 3674 ||||| || |||||| | | || ||||| || ||||||| | ||||| | || Sbjct 16101 GCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGA 16042 Query 3675 GAAACAGACTTTATCAATTGCGTTATCTGGCGCCAGCAAGCTGAAAATTTGGCTAATTGG 3734 ||| | || ||||||||||| || || ||||| | | ||| |||| |||||| | Sbjct 16041 GAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAACGATGGCTACATTA 15982 Query 3735 GCTAAAAAAGGCGCATTGATTGGAATTACTGGACGCATCCAGACACGTAGCTATGAAAAC 3794 |||||||| || || || || | ||||| || || || || | ||||| ||| Sbjct 15981 GCTAAAAAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAACGCGGACTTATGACAAC 15922 Query 3795 CAACAGGGTCAACGAGTGTATGTAACAGAGGTTGTCGCTGAAAATTTTCAAATGCTAGAA 3854 || || || || || || || || || || ||||| || || ||||| ||| | ||||| Sbjct 15921 CAGCAAGGACAGCGTGTCTACGTGACTGAAGTTGTGGCCGATAATTTCCAACTATTAGAA 15862 Query 3855 AGTCGTGCAGC 3865 ||| ||||| Sbjct 15861 AGTAAAGCAGC 15851 >seq1464 Length=66918 Score = 91.5 bits (100), Expect = 3e-14 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 3663 AACGGAGAACGTGAAACAGACTTTATCAATTGCGTTATCTGGCGCCAGCAAGCTGAAAAT 3722 ||||| | ||||| | || ||||| ||||| || || ||||| | ||| |||| Sbjct 17974 AACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACA 18033 Query 3723 TTGGCTAATTGGGCTAAAAAAGGCGCATTGATTGGAATTACTGGACGCATCCAGACACGT 3782 | || || | || | ||||| | | | || | ||||| || || || || ||| Sbjct 18034 CTAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGT 18093 Query 3783 AGCTATGAAAACCAACAGGGTCAACGAGTGTATGTAACAGAGGTTGTCGCTGAAAATTTT 3842 ||||| || ||||| || ||||| ||||| |||||||| || || |||||||| || Sbjct 18094 TCTTATGATAATCAACAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTC 18153 Query 3843 CAAATGCTAGAAAGTCGTGCAGC 3865 ||| | | |||||||||||||| Sbjct 18154 CAATTATTGGAAAGTCGTGCAGC 18176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118641233749968