Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_012756.1
Length=31276
Score E
Sequences producing significant alignments: (Bits) Value
seq1539 116 7e-22
seq1464 104 5e-18
>seq1539
Length=57711
Score = 116 bits (128), Expect = 7e-22
Identities = 203/290 (70%), Gaps = 8/290 (3%)
Strand=Plus/Minus
Query 8344 TTTGGTAGGTCGCTTGACTCGTGATCCTGAGTTACGATACACACCGTCAAATGTG---GC 8400
||| ||||| || || || ||||| || ||||| || || || ||| || ||
Sbjct 16156 TTTAGTAGGACGGTTAACCAAAGATCCCGATTTACGTTATAC--CG-CAAGTGGCACAGC 16100
Query 8401 TGTTGCGACTTTCAGTTTGGCAGTGAATCGCAATTTTAAGAATCAGGCAGGTGATCGTGA 8460
|| || ||||| | || || || ||||||||||||| |||||| || |||| ||
Sbjct 16099 AGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGAGA 16040
Query 8461 AGCTGATTTTATCAGTTGCATCATGTGGCGTCAACAGGCTGAAAACTTTGC-AAATTGGC 8519
|||||||||||||| ||| | || |||||| ||| || |||| | || | ||| ||
Sbjct 16039 AGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAACGATGGCTACATTAGC 15980
Query 8520 TTAAAAAAGGTGCTCTTGTAGGAATCACAGGCCGCATCCAGACTCGTAGCTATGATAATC 8579
|||||| ||| | | | || || || || || || || || | ||||| || |
Sbjct 15979 -TAAAAAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAACGCGGACTTATGACAACC 15921
Query 8580 AGCAAGGCCAACGTGTCTATGTGACAGAAGTGGTAGCTGAAAGTTTTCAA 8629
||||||| || |||||||| ||||| ||||| || || || | ||| |||
Sbjct 15920 AGCAAGGACAGCGTGTCTACGTGACTGAAGTTGTGGCCGATAATTTCCAA 15871
>seq1464
Length=66918
Score = 104 bits (114), Expect = 5e-18
Identities = 184/267 (69%), Gaps = 6/267 (2%)
Strand=Plus/Plus
Query 8366 GATCCTGAGTTACGATACACACCGTCAAATGTG---GCTGTTGCGACTTTCAGTTTGGCA 8422
||||| || |||||||| ||| |||| || ||||| || || |||| ||| ||
Sbjct 17893 GATCCAGATTTACGATATACA---TCAAGTGGCACTGCTGTAGCAACGTTCACTTTAGCT 17949
Query 8423 GTGAATCGCAATTTTAAGAATCAGGCAGGTGATCGTGAAGCTGATTTTATCAGTTGCATC 8482
|| ||||| || || | || || || | ||||| || |||||||| | ||| |
Sbjct 17950 GTCAATCGTAACTTCACGAGCCAAAACGGCAACCGTGAGGCGGATTTTATTAATTGTGTG 18009
Query 8483 ATGTGGCGTCAACAGGCTGAAAACTTTGCAAATTGGCTTAAAAAAGGTGCTCTTGTAGGA 8542
|| ||||| || || |||| | ||||| | | ||||| ||||| ||||
Sbjct 18010 ATTTGGCGAAAATCAGCAGAAACACTAGCAAACTATGCACATAAAGGAACTCTTTTAGGT 18069
Query 8543 ATCACAGGCCGCATCCAGACTCGTAGCTATGATAATCAGCAAGGCCAACGTGTCTATGTG 8602
| || || || || || || ||| ||||||||||| ||||| |||||||| || ||
Sbjct 18070 GTAACTGGTCGTATTCAAACGCGTTCTTATGATAATCAACAAGGACAACGTGTGTACGTA 18129
Query 8603 ACAGAAGTGGTAGCTGAAAGTTTTCAA 8629
|||||||| || ||||||| || |||
Sbjct 18130 ACAGAAGTAGTTGCTGAAAACTTCCAA 18156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 99771573248304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |