Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_012756.1 Length=31276 Score E Sequences producing significant alignments: (Bits) Value seq1539 116 7e-22 seq1464 104 5e-18 >seq1539 Length=57711 Score = 116 bits (128), Expect = 7e-22 Identities = 203/290 (70%), Gaps = 8/290 (3%) Strand=Plus/Minus Query 8344 TTTGGTAGGTCGCTTGACTCGTGATCCTGAGTTACGATACACACCGTCAAATGTG---GC 8400 ||| ||||| || || || ||||| || ||||| || || || ||| || || Sbjct 16156 TTTAGTAGGACGGTTAACCAAAGATCCCGATTTACGTTATAC--CG-CAAGTGGCACAGC 16100 Query 8401 TGTTGCGACTTTCAGTTTGGCAGTGAATCGCAATTTTAAGAATCAGGCAGGTGATCGTGA 8460 || || ||||| | || || || ||||||||||||| |||||| || |||| || Sbjct 16099 AGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGAGA 16040 Query 8461 AGCTGATTTTATCAGTTGCATCATGTGGCGTCAACAGGCTGAAAACTTTGC-AAATTGGC 8519 |||||||||||||| ||| | || |||||| ||| || |||| | || | ||| || Sbjct 16039 AGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAACGATGGCTACATTAGC 15980 Query 8520 TTAAAAAAGGTGCTCTTGTAGGAATCACAGGCCGCATCCAGACTCGTAGCTATGATAATC 8579 |||||| ||| | | | || || || || || || || || | ||||| || | Sbjct 15979 -TAAAAAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAACGCGGACTTATGACAACC 15921 Query 8580 AGCAAGGCCAACGTGTCTATGTGACAGAAGTGGTAGCTGAAAGTTTTCAA 8629 ||||||| || |||||||| ||||| ||||| || || || | ||| ||| Sbjct 15920 AGCAAGGACAGCGTGTCTACGTGACTGAAGTTGTGGCCGATAATTTCCAA 15871 >seq1464 Length=66918 Score = 104 bits (114), Expect = 5e-18 Identities = 184/267 (69%), Gaps = 6/267 (2%) Strand=Plus/Plus Query 8366 GATCCTGAGTTACGATACACACCGTCAAATGTG---GCTGTTGCGACTTTCAGTTTGGCA 8422 ||||| || |||||||| ||| |||| || ||||| || || |||| ||| || Sbjct 17893 GATCCAGATTTACGATATACA---TCAAGTGGCACTGCTGTAGCAACGTTCACTTTAGCT 17949 Query 8423 GTGAATCGCAATTTTAAGAATCAGGCAGGTGATCGTGAAGCTGATTTTATCAGTTGCATC 8482 || ||||| || || | || || || | ||||| || |||||||| | ||| | Sbjct 17950 GTCAATCGTAACTTCACGAGCCAAAACGGCAACCGTGAGGCGGATTTTATTAATTGTGTG 18009 Query 8483 ATGTGGCGTCAACAGGCTGAAAACTTTGCAAATTGGCTTAAAAAAGGTGCTCTTGTAGGA 8542 || ||||| || || |||| | ||||| | | ||||| ||||| |||| Sbjct 18010 ATTTGGCGAAAATCAGCAGAAACACTAGCAAACTATGCACATAAAGGAACTCTTTTAGGT 18069 Query 8543 ATCACAGGCCGCATCCAGACTCGTAGCTATGATAATCAGCAAGGCCAACGTGTCTATGTG 8602 | || || || || || || ||| ||||||||||| ||||| |||||||| || || Sbjct 18070 GTAACTGGTCGTATTCAAACGCGTTCTTATGATAATCAACAAGGACAACGTGTGTACGTA 18129 Query 8603 ACAGAAGTGGTAGCTGAAAGTTTTCAA 8629 |||||||| || ||||||| || ||| Sbjct 18130 ACAGAAGTAGTTGCTGAAAACTTCCAA 18156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99771573248304