Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_012884.1
Length=31147
Score E
Sequences producing significant alignments: (Bits) Value
seq1464 158 2e-34
seq1539 152 1e-32
>seq1464
Length=66918
Score = 158 bits (174), Expect = 2e-34
Identities = 238/334 (71%), Gaps = 7/334 (2%)
Strand=Plus/Plus
Query 28399 AGAGGAGTTGAAATTTTATGATAAATAACGTAGTACTCGTTGGTCGCACAACTAAAGAAA 28458
||||||| ||| ||| |||| |||||||| ||||| ||||| || || |||||
Sbjct 17838 AGAGGAGATGACCATTT-TGATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATC 17896
Query 28459 TTGAATTAAAGTATACA---AGTAACAACTTAGCATATGCAACTTTTACGCTTGCGGTTA 28515
|| ||| |||||| ||| || || || ||||| || || | || || |
Sbjct 17897 CAGATTTACGATATACATCAAGTGGCA-CT--GCTGTAGCAACGTTCACTTTAGCTGTCA 17953
Query 28516 ACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGATTTCATTAATATCGTGATTT 28575
| ||||| || | | ||||| || | ||||| || ||||| |||||| |||||||
Sbjct 17954 ATCGTAACTTCACGAGCCAAAACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTT 18013
Query 28576 GGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAAGGGACTCTTTTAGGCATTA 28635
|||| | ||| |||| |||| |||| || | ||||| ||||||||||| | |
Sbjct 18014 GGCGAAAATCAGCAGAAACACTAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAA 18073
Query 28636 CTGGTCGAATTCAGACCCGCAATTATGAAAACCAACAAGGTCAGCGTGTTTACGTCACAG 28695
||||||| ||||| || || |||||| || |||||||| || ||||| ||||| ||||
Sbjct 18074 CTGGTCGTATTCAAACGCGTTCTTATGATAATCAACAAGGACAACGTGTGTACGTAACAG 18133
Query 28696 AAGTTGTTGCGGATAATTTCCAAACTTTGGAAAG 28729
|||| ||||| || || |||||| ||||||||
Sbjct 18134 AAGTAGTTGCTGAAAACTTCCAATTATTGGAAAG 18167
>seq1539
Length=57711
Score = 152 bits (168), Expect = 1e-32
Identities = 185/252 (73%), Gaps = 0/252 (0%)
Strand=Plus/Minus
Query 28494 GCAACTTTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCT 28553
|| |||||||| | || ||||| || ||||||| |||||||| || | || ||||||
Sbjct 16095 GCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGAGAAGCT 16036
Query 28554 GATTTCATTAATATCGTGATTTGGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAA 28613
||||| || ||| |||||||||||| | | ||| |||| | |||| | ||||||
Sbjct 16035 GATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAACGATGGCTACATTAGCTAAA 15976
Query 28614 AAAGGGACTCTTTTAGGCATTACTGGTCGAATTCAGACCCGCAATTATGAAAACCAACAA 28673
|| || | | | | ||| | || || ||||| || || | |||||| ||||| |||
Sbjct 15975 AAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAACGCGGACTTATGACAACCAGCAA 15916
Query 28674 GGTCAGCGTGTTTACGTCACAGAAGTTGTTGCGGATAATTTCCAAACTTTGGAAAGAAGA 28733
|| |||||||| ||||| || |||||||| || |||||||||||| || ||||| | |
Sbjct 15915 GGACAGCGTGTCTACGTGACTGAAGTTGTGGCCGATAATTTCCAACTATTAGAAAGTAAA 15856
Query 28734 GAAGTGCAAGAA 28745
| || | ||||
Sbjct 15855 GCAGCGACAGAA 15844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 99359557980072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |