Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_012884.1 Length=31147 Score E Sequences producing significant alignments: (Bits) Value seq1464 158 2e-34 seq1539 152 1e-32 >seq1464 Length=66918 Score = 158 bits (174), Expect = 2e-34 Identities = 238/334 (71%), Gaps = 7/334 (2%) Strand=Plus/Plus Query 28399 AGAGGAGTTGAAATTTTATGATAAATAACGTAGTACTCGTTGGTCGCACAACTAAAGAAA 28458 ||||||| ||| ||| |||| |||||||| ||||| ||||| || || ||||| Sbjct 17838 AGAGGAGATGACCATTT-TGATTAATAACGTTGTACTAGTTGGACGTCTGACAAAAGATC 17896 Query 28459 TTGAATTAAAGTATACA---AGTAACAACTTAGCATATGCAACTTTTACGCTTGCGGTTA 28515 || ||| |||||| ||| || || || ||||| || || | || || | Sbjct 17897 CAGATTTACGATATACATCAAGTGGCA-CT--GCTGTAGCAACGTTCACTTTAGCTGTCA 17953 Query 28516 ACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGATTTCATTAATATCGTGATTT 28575 | ||||| || | | ||||| || | ||||| || ||||| |||||| ||||||| Sbjct 17954 ATCGTAACTTCACGAGCCAAAACGGCAACCGTGAGGCGGATTTTATTAATTGTGTGATTT 18013 Query 28576 GGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAAGGGACTCTTTTAGGCATTA 28635 |||| | ||| |||| |||| |||| || | ||||| ||||||||||| | | Sbjct 18014 GGCGAAAATCAGCAGAAACACTAGCAAACTATGCACATAAAGGAACTCTTTTAGGTGTAA 18073 Query 28636 CTGGTCGAATTCAGACCCGCAATTATGAAAACCAACAAGGTCAGCGTGTTTACGTCACAG 28695 ||||||| ||||| || || |||||| || |||||||| || ||||| ||||| |||| Sbjct 18074 CTGGTCGTATTCAAACGCGTTCTTATGATAATCAACAAGGACAACGTGTGTACGTAACAG 18133 Query 28696 AAGTTGTTGCGGATAATTTCCAAACTTTGGAAAG 28729 |||| ||||| || || |||||| |||||||| Sbjct 18134 AAGTAGTTGCTGAAAACTTCCAATTATTGGAAAG 18167 >seq1539 Length=57711 Score = 152 bits (168), Expect = 1e-32 Identities = 185/252 (73%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 28494 GCAACTTTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCT 28553 || |||||||| | || ||||| || ||||||| |||||||| || | || |||||| Sbjct 16095 GCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGAGAAGCT 16036 Query 28554 GATTTCATTAATATCGTGATTTGGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAA 28613 ||||| || ||| |||||||||||| | | ||| |||| | |||| | |||||| Sbjct 16035 GATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAACGATGGCTACATTAGCTAAA 15976 Query 28614 AAAGGGACTCTTTTAGGCATTACTGGTCGAATTCAGACCCGCAATTATGAAAACCAACAA 28673 || || | | | | ||| | || || ||||| || || | |||||| ||||| ||| Sbjct 15975 AAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAACGCGGACTTATGACAACCAGCAA 15916 Query 28674 GGTCAGCGTGTTTACGTCACAGAAGTTGTTGCGGATAATTTCCAAACTTTGGAAAGAAGA 28733 || |||||||| ||||| || |||||||| || |||||||||||| || ||||| | | Sbjct 15915 GGACAGCGTGTCTACGTGACTGAAGTTGTGGCCGATAATTTCCAACTATTAGAAAGTAAA 15856 Query 28734 GAAGTGCAAGAA 28745 | || | |||| Sbjct 15855 GCAGCGACAGAA 15844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99359557980072