Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_013643.1
Length=36270
Score E
Sequences producing significant alignments: (Bits) Value
seq7607 181 2e-41
seq14859 134 3e-27
seq1820 113 1e-20
seq64495 87.8 4e-13
>seq7607
Length=81728
Score = 181 bits (200), Expect = 2e-41
Identities = 224/301 (74%), Gaps = 4/301 (1%)
Strand=Plus/Minus
Query 13535 ATaaaaaaaGCCAGATTGCTCCGGCTGTGAGAAATATTTTCGACATAGTTATTATACCAC 13594
|||||||||||| ||| |||||| ||| | |||| ||||| |||||||| |||
Sbjct 72531 ATAAAAAAAGCCGGATCGCTCCGACTGAT-GTAATAAACCCGACAAGTTTATTATATCAC 72473
Query 13595 AAAA-GGAGCGATTCCACTTGATTCAATTGCTAAAAGAAGTAGATTTTCGACAAACAAAA 13653
|||| |||||| || |||| || ||||| ||| ||| ||||| ||| | || |||| |
Sbjct 72472 AAAAAGGAGCGGTTTGACTTAATGCAATTAATAAGAGATGTAGACTTTAGGCAGACAAGA 72413
Query 13654 GCGAATGCCAGAAATGTGTTGAAGAATTTTAGACGTTTAGAGCGAATAGCTGGTCGCTCT 13713
||||| ||| |||||||||| || || |||| || || || || || ||||| ||
Sbjct 72412 TGTAATGCGAGAGATGTGTTGAAAAACTTCCGACGGTTGGAACGGATGGCAGGTCGTTCA 72353
Query 13714 TTGATAGATTTAAAATCACCAATTATTACAGATATGCCTAAAA-GCCAAAGTCATGGGAA 13772
|||||||| | || || || ||||| || || ||||||| |||||| || || ||
Sbjct 72352 TTGATAGACATTAAGTCGCCGATTATAACTGACATGCCTAGGTCGCCAAAA-CACGGCAA 72294
Query 13773 CAAAGCAGAAGATGCGCTAGTACAATTAGCAGATGCAGAAGCAGAAAGAGACGCAATTTT 13832
|||| ||||||||||||| | ||| || || ||||||||||||||| || |||||
Sbjct 72293 CAAAACAGAAGATGCGCTTATTCAAATAATGGACCTAGAAGCAGAAAGAGATGCGATTTT 72234
Query 13833 A 13833
|
Sbjct 72233 A 72233
Score = 87.8 bits (96), Expect = 4e-13
Identities = 223/337 (66%), Gaps = 7/337 (2%)
Strand=Plus/Minus
Query 10596 ATCGATGTTAATCCTAATCTAGTTGCAGATTTTAGAAATATGCCGTTTGATGATAATTCG 10655
||| |||| || || || | || || || |||||| | || || ||||| |||||
Sbjct 76104 ATCAATGTGAAACCAGATGTTGTAGCTGACTTTAGAGACATACCTTTTGAAAATAATGTT 76045
Query 10656 TTCTATCATGTTGTATTTGATCCTCCGCATTTATTGAGGTGTGGCAATAA--CAGCTGGT 10713
| | || |||||||||||||| || ||||| || |||| | || || |
Sbjct 76044 TACGATTTAGTTGTATTTGATCCACCACATTTGAAATGGGCTGGCCAGAATTCAATTA-- 75987
Query 10714 TGGCCAAAAAATATGGCAAGTTAAACGGGAAAACTTGGAAAGAAGATATACAAAAAGGTT 10773
|| | |||| || || || || | || ||| |||||||||| || | |||
Sbjct 75986 TGAAAGGACAATACGGACAGCTAGACAAAGATACCTGGCCAGAAGATATAAAACAGGGTA 75927
Query 10774 TTCGTGAGTGTATGAGGGTTTTGAAGCCCAATGGGACGTTAGTTTTTAAATGGAATGAGG 10833
| ||||||||| | ||||| |||||||| || || || |||| ||||||||||||
Sbjct 75926 TGTCAGAGTGTATGCGTGTTTTAAAGCCCAACGGAACATTGATTTTCAAATGGAATGAGA 75867
Query 10834 ACCAAATCAAGCTATCTGAAATATTAAGCATAATTGA---TTATAAGCCATTATATGGCA 10890
|||| | || || || | |||| |||||| | | || || | ||| |
Sbjct 75866 ACCAGGTAAAACTCAAAGATGTTTTAAAATCAATTGAACCATTCAGACCTTTGTTTGGAA 75807
Query 10891 ATAAAAGAGCAAAAACACATTGGTTAGTATTTATGAA 10927
||||||| | ||||| |||||||| ||||||||
Sbjct 75806 ATAAAAGGAGTCAGACACACTGGTTAGTTTTTATGAA 75770
>seq14859
Length=68005
Score = 134 bits (148), Expect = 3e-27
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 33769 ATGATACTACCAGACAAGTATTACAAAATTATCAAATGGGGAGTACTTACGGTGCTTCCT 33828
||||| || |||| || ||||| ||||||| |||||| |||||||||||| | |||
Sbjct 48201 ATGATTTTATCAGATAAATATTATCAAATTATTAAATGGACAGTACTTACGGTATTACCT 48260
Query 33829 GCGGGATCTGTTTTAGTAGCTACGTTAGGTAAAGCTTATGGGTGGCAACAAACAGATACG 33888
|| | || || ||||| || || |||| ||||| ||||| ||| | |||||||| |
Sbjct 48261 GCAGTGTCGGTATTAGTTGCAACACTAGGCAAAGCATATGGTTGGGGAGGAACAGATATG 48320
Query 33889 GCAGTGTTGACTATTAACGCTTTATCAGCATTTTTAGGAGTTGTAACAGGCGTGTCAGCA 33948
|||| ||||||| || || || | | |||||||| || |||| || ||||| |||
Sbjct 48321 ACAGTTCTGACTATCAATGCAGTAGCGACGTTTTTAGGTGTAATAACTGGTGTGTCTGCA 48380
Query 33949 TATAACTTAAAA 33960
||||||||||||
Sbjct 48381 TATAACTTAAAA 48392
>seq1820
Length=163924
Score = 113 bits (124), Expect = 1e-20
Identities = 112/144 (78%), Gaps = 1/144 (1%)
Strand=Plus/Plus
Query 13906 TCTAATTACAAGATTGCTAGAGAAGTTGGCTATTCCGAAAGAAGTATTCAAAGAATGAAA 13965
|| ||||| |||||| | ||| | || ||||||||||||| ||||| |||| |||
Sbjct 6545 TCGAATTATAAGATTAGTCTTGAAATCGGTTATTCCGAAAGAACGATTCAGAGAAAAAAA 6604
Query 13966 TCAGAAGCTTTGATTGAATTCGCGGAAGCTTACCGAAACGGCAAAATAATTGCATATAAA 14025
||||||| |||||||||||||| ||||| || | || ||| | ||||| ||||||
Sbjct 6605 GCAGAAGCATTGATTGAATTCGCTGAAGCATATAAGACTGGAAAACTGATTGCGTATAAA 6664
Query 14026 TAATTTTGGCGGTTTTTTGGCGGA 14049
||| ||||||| ||||||||| ||
Sbjct 6665 TAA-TTTGGCGTTTTTTTGGCAGA 6687
>seq64495
Length=424
Score = 87.8 bits (96), Expect = 4e-13
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 35352 GGACCATTAGCTCAGTTGGTTAGAGCCAACCGCTCATAACGGTTAGGTCATAGGTTCGAG 35411
||||| |||||||||||||||||||| || ||||||||| || |||| ||||||||||
Sbjct 311 GGACCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGAG 370
Query 35412 TCCTGTATGGTCCATA 35427
|||| | ||||||||
Sbjct 371 TCCTACAAGGTCCATA 386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 115721993787456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |