Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_013643.1 Length=36270 Score E Sequences producing significant alignments: (Bits) Value seq7607 181 2e-41 seq14859 134 3e-27 seq1820 113 1e-20 seq64495 87.8 4e-13 >seq7607 Length=81728 Score = 181 bits (200), Expect = 2e-41 Identities = 224/301 (74%), Gaps = 4/301 (1%) Strand=Plus/Minus Query 13535 ATaaaaaaaGCCAGATTGCTCCGGCTGTGAGAAATATTTTCGACATAGTTATTATACCAC 13594 |||||||||||| ||| |||||| ||| | |||| ||||| |||||||| ||| Sbjct 72531 ATAAAAAAAGCCGGATCGCTCCGACTGAT-GTAATAAACCCGACAAGTTTATTATATCAC 72473 Query 13595 AAAA-GGAGCGATTCCACTTGATTCAATTGCTAAAAGAAGTAGATTTTCGACAAACAAAA 13653 |||| |||||| || |||| || ||||| ||| ||| ||||| ||| | || |||| | Sbjct 72472 AAAAAGGAGCGGTTTGACTTAATGCAATTAATAAGAGATGTAGACTTTAGGCAGACAAGA 72413 Query 13654 GCGAATGCCAGAAATGTGTTGAAGAATTTTAGACGTTTAGAGCGAATAGCTGGTCGCTCT 13713 ||||| ||| |||||||||| || || |||| || || || || || ||||| || Sbjct 72412 TGTAATGCGAGAGATGTGTTGAAAAACTTCCGACGGTTGGAACGGATGGCAGGTCGTTCA 72353 Query 13714 TTGATAGATTTAAAATCACCAATTATTACAGATATGCCTAAAA-GCCAAAGTCATGGGAA 13772 |||||||| | || || || ||||| || || ||||||| |||||| || || || Sbjct 72352 TTGATAGACATTAAGTCGCCGATTATAACTGACATGCCTAGGTCGCCAAAA-CACGGCAA 72294 Query 13773 CAAAGCAGAAGATGCGCTAGTACAATTAGCAGATGCAGAAGCAGAAAGAGACGCAATTTT 13832 |||| ||||||||||||| | ||| || || ||||||||||||||| || ||||| Sbjct 72293 CAAAACAGAAGATGCGCTTATTCAAATAATGGACCTAGAAGCAGAAAGAGATGCGATTTT 72234 Query 13833 A 13833 | Sbjct 72233 A 72233 Score = 87.8 bits (96), Expect = 4e-13 Identities = 223/337 (66%), Gaps = 7/337 (2%) Strand=Plus/Minus Query 10596 ATCGATGTTAATCCTAATCTAGTTGCAGATTTTAGAAATATGCCGTTTGATGATAATTCG 10655 ||| |||| || || || | || || || |||||| | || || ||||| ||||| Sbjct 76104 ATCAATGTGAAACCAGATGTTGTAGCTGACTTTAGAGACATACCTTTTGAAAATAATGTT 76045 Query 10656 TTCTATCATGTTGTATTTGATCCTCCGCATTTATTGAGGTGTGGCAATAA--CAGCTGGT 10713 | | || |||||||||||||| || ||||| || |||| | || || | Sbjct 76044 TACGATTTAGTTGTATTTGATCCACCACATTTGAAATGGGCTGGCCAGAATTCAATTA-- 75987 Query 10714 TGGCCAAAAAATATGGCAAGTTAAACGGGAAAACTTGGAAAGAAGATATACAAAAAGGTT 10773 || | |||| || || || || | || ||| |||||||||| || | ||| Sbjct 75986 TGAAAGGACAATACGGACAGCTAGACAAAGATACCTGGCCAGAAGATATAAAACAGGGTA 75927 Query 10774 TTCGTGAGTGTATGAGGGTTTTGAAGCCCAATGGGACGTTAGTTTTTAAATGGAATGAGG 10833 | ||||||||| | ||||| |||||||| || || || |||| |||||||||||| Sbjct 75926 TGTCAGAGTGTATGCGTGTTTTAAAGCCCAACGGAACATTGATTTTCAAATGGAATGAGA 75867 Query 10834 ACCAAATCAAGCTATCTGAAATATTAAGCATAATTGA---TTATAAGCCATTATATGGCA 10890 |||| | || || || | |||| |||||| | | || || | ||| | Sbjct 75866 ACCAGGTAAAACTCAAAGATGTTTTAAAATCAATTGAACCATTCAGACCTTTGTTTGGAA 75807 Query 10891 ATAAAAGAGCAAAAACACATTGGTTAGTATTTATGAA 10927 ||||||| | ||||| |||||||| |||||||| Sbjct 75806 ATAAAAGGAGTCAGACACACTGGTTAGTTTTTATGAA 75770 >seq14859 Length=68005 Score = 134 bits (148), Expect = 3e-27 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 33769 ATGATACTACCAGACAAGTATTACAAAATTATCAAATGGGGAGTACTTACGGTGCTTCCT 33828 ||||| || |||| || ||||| ||||||| |||||| |||||||||||| | ||| Sbjct 48201 ATGATTTTATCAGATAAATATTATCAAATTATTAAATGGACAGTACTTACGGTATTACCT 48260 Query 33829 GCGGGATCTGTTTTAGTAGCTACGTTAGGTAAAGCTTATGGGTGGCAACAAACAGATACG 33888 || | || || ||||| || || |||| ||||| ||||| ||| | |||||||| | Sbjct 48261 GCAGTGTCGGTATTAGTTGCAACACTAGGCAAAGCATATGGTTGGGGAGGAACAGATATG 48320 Query 33889 GCAGTGTTGACTATTAACGCTTTATCAGCATTTTTAGGAGTTGTAACAGGCGTGTCAGCA 33948 |||| ||||||| || || || | | |||||||| || |||| || ||||| ||| Sbjct 48321 ACAGTTCTGACTATCAATGCAGTAGCGACGTTTTTAGGTGTAATAACTGGTGTGTCTGCA 48380 Query 33949 TATAACTTAAAA 33960 |||||||||||| Sbjct 48381 TATAACTTAAAA 48392 >seq1820 Length=163924 Score = 113 bits (124), Expect = 1e-20 Identities = 112/144 (78%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 13906 TCTAATTACAAGATTGCTAGAGAAGTTGGCTATTCCGAAAGAAGTATTCAAAGAATGAAA 13965 || ||||| |||||| | ||| | || ||||||||||||| ||||| |||| ||| Sbjct 6545 TCGAATTATAAGATTAGTCTTGAAATCGGTTATTCCGAAAGAACGATTCAGAGAAAAAAA 6604 Query 13966 TCAGAAGCTTTGATTGAATTCGCGGAAGCTTACCGAAACGGCAAAATAATTGCATATAAA 14025 ||||||| |||||||||||||| ||||| || | || ||| | ||||| |||||| Sbjct 6605 GCAGAAGCATTGATTGAATTCGCTGAAGCATATAAGACTGGAAAACTGATTGCGTATAAA 6664 Query 14026 TAATTTTGGCGGTTTTTTGGCGGA 14049 ||| ||||||| ||||||||| || Sbjct 6665 TAA-TTTGGCGTTTTTTTGGCAGA 6687 >seq64495 Length=424 Score = 87.8 bits (96), Expect = 4e-13 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 35352 GGACCATTAGCTCAGTTGGTTAGAGCCAACCGCTCATAACGGTTAGGTCATAGGTTCGAG 35411 ||||| |||||||||||||||||||| || ||||||||| || |||| |||||||||| Sbjct 311 GGACCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGAG 370 Query 35412 TCCTGTATGGTCCATA 35427 |||| | |||||||| Sbjct 371 TCCTACAAGGTCCATA 386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115721993787456