Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_013644.1 Length=37856 Score E Sequences producing significant alignments: (Bits) Value seq64495 100 7e-17 seq14859 86.0 2e-12 seq82932 82.4 2e-11 seq2203 82.4 2e-11 >seq64495 Length=424 Score = 100 bits (110), Expect = 7e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 37498 GGACCATTAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGAG 37557 ||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| Sbjct 311 GGACCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGAG 370 Query 37558 CCCTGTATGGTCCATAGC 37575 ||| | |||||||||| Sbjct 371 TCCTACAAGGTCCATAGC 388 >seq14859 Length=68005 Score = 86.0 bits (94), Expect = 2e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 37487 GGCTCTTTTCAGGACCATTAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTC 37546 |||| || || | ||| |||||||||||||| |||||| |||| |||||||||| ||||| Sbjct 49939 GGCTATTATCCGTACCCTTAGCTCAGTTGGTCAGAGCAGACGGATCATAACCGTCCGGTC 49998 Query 37547 ACAGGTTCGAGCCCTGTATGGTCCATA 37573 ||||||||| ||| | ||| |||| Sbjct 49999 GTAGGTTCGAGTCCTACAGGGTACATA 50025 >seq82932 Length=3722 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 37501 CCATTAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGAGCCC 37560 || ||||||||||||||||||||| ||||||||||||||| |||| ||||||||| || Sbjct 320 CCCTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCTGGTCGTAGGTTCGAGACC 261 Query 37561 TGTATGGTCCATA 37573 | | ||| |||| Sbjct 260 TACAGGGTACATA 248 >seq2203 Length=131112 Score = 82.4 bits (90), Expect = 2e-11 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 23579 TTTTATTTTGTCCAGGAGCCATGACGTTAAAAGGGCACCGCTACCGAGCAGACGGTATAT 23638 ||||||||||||| | | ||||| ||||| | | |||||||| ||||||| Sbjct 5474 TTTTATTTTGTCCTGAAT--ATGACATTAAACTGTT-CATCTACCGAGTGAGCGGTATAA 5530 Query 23639 TCTGACACTCTAAGC-GGCAGCGACCGCTATATAAATGCTATGGAGGTAGAAAACGATGG 23697 || ||||||||| | || | | ||| ||| ||| | | |||| ||| |||| Sbjct 5531 -CTCACACTCTAAACTGGTACCAACCAGAATAAAAAGGA-ACGGAGAATGAATC--ATGG 5586 Query 23698 AATGGATCAAACAAATTTTAGCAAAACATATGAAAGAAGATGGTACGTTGGATATGGAGG 23757 ||||||||||| |||||||| ||||||| | ||| ||||| | ||| ||| | || | Sbjct 5587 AATGGATCAAAGAAATTTTATCAAAACACGTCGGAGAGGATGGGAAGTTTGATCTAGACG 5646 Query 23758 CTGCTAATAAAGAAATTGACAAAGAATTTCCTGTAAATGCAGTACCAAAAG 23808 || | |||||||| | ||||||||| |||||| || || |||| Sbjct 5647 GAGCGACAAAAGAAATAAAATCAGAATTTCCGAAAAATGCTGTGCCTAAAG 5697 Score = 80.6 bits (88), Expect = 6e-11 Identities = 67/81 (83%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 37500 ACCATTAGCTCAGTTGGTTAGAGCAAACGGCTCATAACCGTTCGGTCACAGGTTCGAGCC 37559 ||| |||||||||||||| |||||| || |||||||||||| ||||| |||||||| | Sbjct 24690 ACCCTTAGCTCAGTTGGTCAGAGCAGACAGCTCATAACCGTCCGGTCGTAGGTTCGAATC 24749 Query 37560 CTGTATGGTCCATAGCTAAAA 37580 || | ||| ||||| ||||| Sbjct 24750 CTACAGGGTACATAG-TAAAA 24769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120787545844944