Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_013645.1
Length=34882
Score E
Sequences producing significant alignments: (Bits) Value
seq1464 147 5e-31
seq1539 113 1e-20
seq3145 105 1e-18
seq28223 89.7 1e-13
>seq1464
Length=66918
Score = 147 bits (162), Expect = 5e-31
Identities = 219/308 (71%), Gaps = 6/308 (2%)
Strand=Plus/Plus
Query 29167 CTAGTTGGTCGCATGACCAAAGATGCAGAACTA--AAATACA-CTGGGAACAATATCGCA 29223
|||||||| || |||| |||||| |||| || | ||||| | | || | ||
Sbjct 17872 CTAGTTGGACGTCTGACAAAAGATCCAGATTTACGATATACATCAAGTGGCACT---GCT 17928
Query 29224 GTAGCATCTTTCAGCCTTGCGGTTAACCGTAACTTTAAGGATGCTAATGGTGAGCGTGAA 29283
|||||| | |||| | || || || |||||||| | | || || | |||||
Sbjct 17929 GTAGCAACGTTCACTTTAGCTGTCAATCGTAACTTCACGAGCCAAAACGGCAACCGTGAG 17988
Query 29284 ACTGACTTTATCAATTGCGTTATCTGGAGACAGCAAGCTGAAAACTTGGCTAACTGGGCT 29343
| || ||||| ||||| || || ||| || | ||| |||| | || |||| ||
Sbjct 17989 GCGGATTTTATTAATTGTGTGATTTGGCGAAAATCAGCAGAAACACTAGCAAACTATGCA 18048
Query 29344 AAGAAAGGAGCATTGATTGGTATTACTGGACGTATTCAGACTCGTAGCTATGAAAATCAA 29403
| |||||| | | | ||| | ||||| |||||||| || ||| ||||| ||||||
Sbjct 18049 CATAAAGGAACTCTTTTAGGTGTAACTGGTCGTATTCAAACGCGTTCTTATGATAATCAA 18108
Query 29404 CAAGGTCAACGTGTTTACGTGACTGAAGTTGTTGCTGAAAACTTCCAGATGTTGGAAAGT 29463
||||| |||||||| ||||| || ||||| ||||||||||||||||| | |||||||||
Sbjct 18109 CAAGGACAACGTGTGTACGTAACAGAAGTAGTTGCTGAAAACTTCCAATTATTGGAAAGT 18168
Query 29464 CGTGCAGC 29471
||||||||
Sbjct 18169 CGTGCAGC 18176
>seq1539
Length=57711
Score = 113 bits (124), Expect = 1e-20
Identities = 176/252 (70%), Gaps = 0/252 (0%)
Strand=Plus/Minus
Query 29221 GCAGTAGCATCTTTCAGCCTTGCGGTTAACCGTAACTTTAAGGATGCTAATGGTGAGCGT 29280
||||| || |||| | | | || ||||| || || |||| | || || || | ||
Sbjct 16101 GCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATCAAAACGGCAATCGA 16042
Query 29281 GAAACTGACTTTATCAATTGCGTTATCTGGAGACAGCAAGCTGAAAACTTGGCTAACTGG 29340
||| |||| ||||||||||| || || ||| | | | ||| |||| |||||| |
Sbjct 16041 GAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAACGATGGCTACATTA 15982
Query 29341 GCTAAGAAAGGAGCATTGATTGGTATTACTGGACGTATTCAGACTCGTAGCTATGAAAAT 29400
||||| || || || || || | ||||| ||||| || || | ||||| ||
Sbjct 15981 GCTAAAAAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAACGCGGACTTATGACAAC 15922
Query 29401 CAACAAGGTCAACGTGTTTACGTGACTGAAGTTGTTGCTGAAAACTTCCAGATGTTGGAA 29460
|| ||||| || ||||| ||||||||||||||||| || || || ||||| | || |||
Sbjct 15921 CAGCAAGGACAGCGTGTCTACGTGACTGAAGTTGTGGCCGATAATTTCCAACTATTAGAA 15862
Query 29461 AGTCGTGCAGCG 29472
||| ||||||
Sbjct 15861 AGTAAAGCAGCG 15850
>seq3145
Length=45091
Score = 105 bits (116), Expect = 1e-18
Identities = 157/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 29238 CCTTGCGGTTAACCGTAACTTTAAGGATGCTAATGGTGAGCGTGAAACTGACTTTATCAA 29297
|||||| ||||| || ||||||| || || ||||||||| | ||||| | |
Sbjct 1883 CCTTGCAGTTAATCGAAACTTTACCAATCAAGCCGGAGAGCGTGAAGCAGACTTCGTTCA 1942
Query 29298 TTGCGTTATCTGGAGACAGCAAGCTGAAAACTTGGCTAACTGGGCTAAGAAAGGAGCATT 29357
|| || || ||||| | | ||| |||| ||||||| | ||| | ||| | ||
Sbjct 1943 ATGTGTGATTTGGAGGAAACCAGCGGAAACACTGGCTAATTATGCTCGCAGGGGAACCTT 2002
Query 29358 GATTGGTATTACTGGACGTATTCAGACTCGTAGCTATGAAAATCAACAAGGTCAACGTGT 29417
| | || | || ||||| ||||| || ||| ||||| ||||| ||||| ||||||||
Sbjct 2003 GCTAGGCGTGACCGGACGAATTCAAACACGTTCTTATGACAATCAGCAAGGGCAACGTGT 2062
Query 29418 TTACGTGACTGAAGTTGTTGCTGAAAACTTCCAGATGTTGGAA 29460
||| || || |||||||| || || || || || ||||||||
Sbjct 2063 TTATGTAACGGAAGTTGTAGCAGAGAATTTTCAATTGTTGGAA 2105
>seq28223
Length=7146
Score = 89.7 bits (98), Expect = 1e-13
Identities = 126/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 25515 TGTCTGATAATCAAAAATACTATTATATGAGGCTCAAACAAGACTTCTTTGAGACGGAAG 25574
|| ||||||| | |||||| ||| | | || ||| | | || ||||| | || |
Sbjct 188 TGGCTGATAACAAGCGATACTACTATTTAAAACTAAAAGAGAATTTTTTTGATAGTGACG 247
Query 25575 AAATGATAATACTTGAGTCTATGCAAGACGGCTATTTGTATAGCAACATCTTGTTGAAAC 25634
||||||| | ||||| ||||| ||| |||||| | ||| ||||| | | ||||
Sbjct 248 AAATGATTCTTCTTGAAAGTATGCCAGATGGCTATATATATTCTAACATTCTCCTCAAAC 307
Query 25635 TATATTTGAGAAGTTTAAAGCGTGACGGTAAATTGATGTTTAACGACACAATCCCAT 25691
| ||||| ||||| | |||| ||| || || ||||||||||| |||| ||| ||||
Sbjct 308 TCTATTTACGAAGTCTGAAGCATGAAGGCAAGTTGATGTTTAATGACAGAATTCCAT 364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 111288837257952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |