Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_013646.1
Length=38764
Score E
Sequences producing significant alignments: (Bits) Value
seq14859 316 5e-82
seq7607 215 1e-51
seq1820 107 5e-19
seq64495 87.8 4e-13
>seq14859
Length=68005
Score = 316 bits (350), Expect = 5e-82
Identities = 500/720 (69%), Gaps = 3/720 (0%)
Strand=Plus/Plus
Query 16952 AGAAAACAAAACTCAACCATTTATATGAAAGCGAGGTGGTGT-TAATGGATGGCTAGAAA 17010
|||||||||||||||||| | || ||| |||||||||||| || || ||||| |||||
Sbjct 28664 AGAAAACAAAACTCAACC--TAATCAGAATGCGAGGTGGTGTATATTGAATGGCAAGAAA 28721
Query 17011 AAGAGATCCACGTCGTGACCAGGCTAAAGAAACTTGGTTAAAGTCAAACGGTAAAAAGGT 17070
| | |||||| | ||||| | || ||| | |||||| | || || || |||||
Sbjct 28722 ACGTGATCCAAGACGTGATGAAGCCAAAAGGATTTGGTTGGAATCCAAGGGAGAAAAGCA 28781
Query 17071 TCTTAAAGAATTAGCTAATGAATTAAATGTTTCAGATTCCCAAATAAGAAAATGGAAATC 17130
| || || | || | |||||||||||||||||||| ||| | ||||||||||||||
Sbjct 28782 ATTAAAGGACATTGCAACAGAATTAAATGTTTCAGATTCACAAGTTAGAAAATGGAAATC 28841
Query 17131 GATAGATAAATGGGCTGATGAATTAAAAGGTAATGTTACCAATTCNNNNNNNNNNNNNNN 17190
|||||||||||| ||| |||| |||||||||||||||| |
Sbjct 28842 TATAGATAAATGGAGCGATAAATTGAAAGGTAATGTTACCATTGGCAAAAGTAACGTTAC 28901
Query 17191 NNNTAAAGGTGGAGCGCCGCCTGGAAACAAAAATGCCGTAGGTAACAAAGGGAATAAAAG 17250
| ||||||| || || ||| || | || || || || ||||| |||| |
Sbjct 28902 CAATCAAGGTGGCGCTCCTTTTGGTAATCAGAACGCAAAGGGGAATAAAGGCAATAGCCG 28961
Query 17251 TGCCTCGCCACCAAAAAGAAATAAGAATGCGGTAAAAACAGGTGAATATGAGACAATATT 17310
||||| || ||| | | || ||||| || | ||||| || || ||||| || |||||
Sbjct 28962 AGCCTCACCGCCAGTAGGGAACAAGAACGCTTTGAAAACTGGCGAGTATGAAACCATATT 29021
Query 17311 TGCTGACTTACTATCTGACGAAGAAAAGGACATCTATTCTAAACTGAATGATGATCCttt 17370
| || | || || ||||| |||||||||||||||| ||||| |||||||||
Sbjct 29022 TTACGAAACATTAAGCGATGAAGAGAAGGACATCTATTCTAGTTTGAATAATGATCCTTC 29081
Query 17371 ttttGTTTTGGAGGAAGAAATAAGAATCCTAAAGATTCGTCAATATAGAATGCTTAAACG 17430
|||||||||| || ||||| | | ||||||| | || | ||||| | ||| |
Sbjct 29082 TTTTGTTTTGTCTGAGGAAATTCGTTTGTTAAAGATAAGACAGTTGCGAATGATGAAAAG 29141
Query 17431 CATAAAAAATGCAGAGGCTGGCTTAAATGATGAAGAAGTTGAACGTTTGCAACAGCTTCG 17490
||| | || || |||||||| ||||| ||||||||| | |||||| |||||||| | |
Sbjct 29142 AATACAGAAAGCCGAGGCTGGTTTAAACGATGAAGAAATCGAACGTCTGCAACAGTTAAG 29201
Query 17491 GAAAGTTAAAGAGCCATCGGCAATTGATGGGAAAATGGTTACTGTCAAAAGAGAAGTTTT 17550
||| | ||| ||| | || | || | || | | ||||| |||| ||| |
Sbjct 29202 AAAAATCAAAACGCCGATTGAAAAAAACGGTAGAAAGTTAGAAATCAAACGAGAGGTTAT 29261
Query 17551 GAAAGATGTACAAATAACTCGTAAAACATTTAGAAAGTTAGATGACATTTTAGCTATAGA 17610
| ||||||| ||| | | | |||| | | | || | ||||||||| | | || ||
Sbjct 29262 GCAAGATGTTCAAGTTAGCAGAAAAAAACATCGCAAAATTGATGACATTCTTTCAATTGA 29321
Query 17611 AGATGCGTTGACTCGCGTTAGCAATCAACTAGTCAAAGCGATTAAGCAACAAAAAGAACT 17670
|||| | || ||||| |||||||||| ||| ||||| ||||||||| || |||||
Sbjct 29322 AGATTCATTAACTCGGATTAGCAATCAGTTAGCTAAAGCCATTAAGCAAATGAATGAACT 29381
Score = 134 bits (148), Expect = 3e-27
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 36266 ATGATACTACCAGACAAGTATTACAAAATTATCAAATGGGGAGTACTTACGGTGCTTCCT 36325
||||| || |||| || ||||| ||||||| |||||| |||||||||||| | |||
Sbjct 48201 ATGATTTTATCAGATAAATATTATCAAATTATTAAATGGACAGTACTTACGGTATTACCT 48260
Query 36326 GCGGGATCTGTTTTAGTAGCTACGTTAGGTAAAGCTTATGGGTGGCAACAAACAGATACG 36385
|| | || || ||||| || || |||| ||||| ||||| ||| | |||||||| |
Sbjct 48261 GCAGTGTCGGTATTAGTTGCAACACTAGGCAAAGCATATGGTTGGGGAGGAACAGATATG 48320
Query 36386 GCAGTGTTGACTATTAACGCTTTATCAGCATTTTTAGGAGTTGTAACAGGCGTGTCAGCA 36445
|||| ||||||| || || || | | |||||||| || |||| || ||||| |||
Sbjct 48321 ACAGTTCTGACTATCAATGCAGTAGCGACGTTTTTAGGTGTAATAACTGGTGTGTCTGCA 48380
Query 36446 TATAACTTAAAA 36457
||||||||||||
Sbjct 48381 TATAACTTAAAA 48392
>seq7607
Length=81728
Score = 215 bits (238), Expect = 1e-51
Identities = 265/357 (74%), Gaps = 4/357 (1%)
Strand=Plus/Minus
Query 13876 ATaaaaaaaGCCAGATTGCTCCGGCTGTGAGTAATATTTTCGACATAGTTATTATACCAC 13935
|||||||||||| ||| |||||| ||| |||||| ||||| |||||||| |||
Sbjct 72531 ATAAAAAAAGCCGGATCGCTCCGACTGAT-GTAATAAACCCGACAAGTTTATTATATCAC 72473
Query 13936 AAAA-GGAGCGATTTCACTTGATTCAATTGCTAAAAGAAGTAGATTTTCGACAAACAAAA 13994
|||| |||||| ||| |||| || ||||| ||| ||| ||||| ||| | || |||| |
Sbjct 72472 AAAAAGGAGCGGTTTGACTTAATGCAATTAATAAGAGATGTAGACTTTAGGCAGACAAGA 72413
Query 13995 GTGAATGCTAGAAATGTGTTGAAGAATTTTAGACGTTTAGAGCGAATAGCTGGTCGCTCT 14054
||||| ||| |||||||||| || || |||| || || || || || ||||| ||
Sbjct 72412 TGTAATGCGAGAGATGTGTTGAAAAACTTCCGACGGTTGGAACGGATGGCAGGTCGTTCA 72353
Query 14055 TTGATAGATTTAAAATCACCAATTATTACAGATATGCCTAAAA-GCCAAAGTCATGGGAA 14113
|||||||| | || || || ||||| || || ||||||| |||||| || || ||
Sbjct 72352 TTGATAGACATTAAGTCGCCGATTATAACTGACATGCCTAGGTCGCCAAAA-CACGGCAA 72294
Query 14114 CAAATCAGAAGATGCGCTAGTACAATTAGCAGATGCAGAAGCAGAAAGAGATGCAATTTT 14173
|||| ||||||||||||| | ||| || || |||||||||||||||||| |||||
Sbjct 72293 CAAAACAGAAGATGCGCTTATTCAAATAATGGACCTAGAAGCAGAAAGAGATGCGATTTT 72234
Query 14174 ATCTGCACTTATGGCTTTGAGTTTGACTAGTAGACAAATTCTGCACTACAGTTTTTG 14230
| || || ||| ||||||| | | ||| | ||||| || | || ||||||||
Sbjct 72233 AGTAGCCCTGATGAGTTTGAGTCTTATCAGTCGTCAAATACTCTATTATAGTTTTTG 72177
>seq1820
Length=163924
Score = 107 bits (118), Expect = 5e-19
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 14151 GAAGCAGAAAGAGATGCAATTTTATCTGCACTTATGGCTTTGAGTTTGACTAGTAGACAA 14210
||||||||||| ||||||| ||| ||| | |||| ||||||| | || | | ||
Sbjct 6449 GAAGCAGAAAGGAATGCAATCTTAAATGCTTTGATGGTTTTGAGTCTAACGAATCGAATG 6508
Query 14211 ATTCTGCACTACAGTTTTTGTGTGCAGGATCATTACTCTAATTACAAGATTGCTAGAGAA 14270
|| || | || || || ||| | || || || ||||| |||||| | |||
Sbjct 6509 ATCCTTTATTATTCTTATTTTGTTCCTGAAAGTTTTTCGAATTATAAGATTAGTCTTGAA 6568
Query 14271 GTTGGATATTCTGAAAGAAGTATTCAACGCATGAAATCAGAAGCTTTGATTGAATTCGCG 14330
| || ||||| ||||||| ||||| | | ||| ||||||| ||||||||||||||
Sbjct 6569 ATCGGTTATTCCGAAAGAACGATTCAGAGAAAAAAAGCAGAAGCATTGATTGAATTCGCT 6628
Query 14331 GAAGCTTACCGAAATGGCAAAATAATTGCATATAAATAATTT 14372
||||| || | ||| ||| | ||||| ||||||||||||
Sbjct 6629 GAAGCATATAAGACTGGAAAACTGATTGCGTATAAATAATTT 6670
>seq64495
Length=424
Score = 87.8 bits (96), Expect = 4e-13
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 37849 GGACCATTAGCTCAGTTGGTTAGAGCCAACCGCTCATAACGGTTAGGTCATAGGTTCGAG 37908
||||| |||||||||||||||||||| || ||||||||| || |||| ||||||||||
Sbjct 311 GGACCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGAG 370
Query 37909 TCCTGTATGGTCCATA 37924
|||| | ||||||||
Sbjct 371 TCCTACAAGGTCCATA 386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123687622306608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |