Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_013648.1 Length=39576 Score E Sequences producing significant alignments: (Bits) Value seq14859 1225 0.0 seq7607 161 3e-35 seq1820 109 1e-19 seq64495 87.8 5e-13 >seq14859 Length=68005 Score = 1225 bits (1358), Expect = 0.0 Identities = 1291/1689 (76%), Gaps = 20/1689 (1%) Strand=Plus/Plus Query 16325 ATGCGTATTGAGAAAATGAAATTATCTGATTTAAAACCAGCCCCGTATAATCCTAGAATT 16384 |||| ||||| |||||||||| |||||||||||||| |||||||| ||| || Sbjct 25986 ATGCAAATTGAATTAATGAAATTAGAGGATTTAAAACCAGCAGATTATAATCCAAGAGTT 26045 Query 16385 GAATTGAAACCAGGTATGACGGAATACGAAAACTTAAAAAACTCTCTTTTAGAATTTGGT 16444 | || |||| |||||| |||||||| || |||||| | || ||||||||||||| Sbjct 26046 AAGTTAGAACCTGGTATGGACGAATACGAGAAGTTAAAACAGTCCATTTTAGAATTTGGC 26105 Query 16445 TTTGTTGACCCTCCTATTTTTAACCAACAAACAGGTTGTTTGGTAGGTGGACATCAACGA 16504 |||||||| || |||||||||||| | | |||||| | | || ||||| |||||||| Sbjct 26106 TTTGTTGATCCACCTATTTTTAACAAGCGAACAGGCAATCTCGTCGGTGGTCATCAACGT 26165 Query 16505 GTTGCTGTTGCGATAGATTTAGG---ATTTAAAGAAGTTGAGACTTCAATAGTTGATTTA 16561 |||||||| || | |||||| || || |||| | ||| || |||| ||||| Sbjct 26166 GTTGCTGTGGCTAAAGATTTGGGCGTATGCGAAGAGATAGAGGTATCGGTAGTATATTTA 26225 Query 16562 CCATTaaaaaaaGAAAAGATACTAAATATCGCTTTGAACAATCTTGAGGGTTCGTGGGAT 16621 | || | |||||||| || ||| | ||| | || || || ||| |||||| Sbjct 26226 TCCCTAGAGAAAGAAAAAGCGCTCAATGTGGCTCTCAATAAAATTTCTGGTCGATGGGAT 26285 Query 16622 GAAGAAAAACTCACAG---TATTGCTTGAAGACTTAGAAAGTGACGAATTGCTACTAACA 16678 ||||| ||| | ||| |||| | ||| | | ||| || ||| | |||| Sbjct 26286 GAAGATAAATTATCAGAGTTATTAC--GAAATATGAAAAAC-GAGGAACTAGGGTTAACT 26342 Query 16679 GGTTTTAGTCAAAGCGAATTAGATGATTTACTATCAGATTTAGATGAAATTGAGACATTA 16738 || |||| |||| ||| ||||||||||||| | | | ||||| ||| || ||| Sbjct 26343 GGATTTAATCAAGAGGAAATAGATGATTTACTTGGAAGTATGGATGAGGTTGTAACTTTA 26402 Query 16739 GCAGATAAAGTAAAAGCTAATCCAGTGAATTCAAATTTATTTGATTCTTTTTTGTTTCCG 16798 || || ||||||||||| || || || ||||| |||||||||||| ||||| | ||||| Sbjct 26403 GCTGAAAAAGTAAAAGCCAACCCTGTCAATTCTAATTTATTTGATACTTTTCTATTTCCA 26462 Query 16799 CCGTTTTCCTACCTAGATACAAAAACCAAAAGATGGTTAGATCGTAAAAAGCAGTGGAAA 16858 || ||||| || || ||||| ||||| || | ||||||||| | ||||| ||||||||| Sbjct 26463 CCTTTTTCTTATCTTGATACGAAAACAAAGCGTTGGTTAGATAGAAAAAAACAGTGGAAA 26522 Query 16859 GAATTGGGAATTAAGAGTGAACTTGGCCGAGAGGATAATTTAGTTTTTAGTGCTAACTTG 16918 ||| | || |||||||||||| |||| || | || || |||| |||| | || | Sbjct 26523 GAACTAGGGATTAAGAGTGAAATTGGTCGCGGTGAAAACCTAGTATTTAATAATAGTCTT 26582 Query 16919 CAAGCTCCAGGACTAGAAGGCACCTCTATTTTCGATCCAGTTCTTTGTGAATTGGGTTAT 16978 || ||||| ||| |||| || || || || || ||||| || | |||||| | || ||| Sbjct 26583 CAGGCTCCTGGATTAGAGGGTACATCAATCTTTGATCCGGTATTGTGTGAACTAGGATAT 26642 Query 16979 CGCTGGTTTACCCCAAAAACAAAAAGCAATATTTTTGATCCATTCGCTGGTGGTTCTGTT 17038 || ||||| || |||||||| |||||||||||||||||| || |||||||||||||| Sbjct 26643 CGATGGTTCACACCAAAAACGGGAAGCAATATTTTTGATCCGTTTGCTGGTGGTTCTGTA 26702 Query 17039 CGTGGAATAGTAGCAAAAGTTCTTGGACATAATTATACAGGTATTGATTTAAGAGCAGAA 17098 ||||||||||| ||||||||| | ||||| || ||||||||||||||||||||| ||| Sbjct 26703 CGTGGAATAGTTGCAAAAGTTTTAGGACACAACTATACAGGTATTGATTTAAGAAAGGAA 26762 Query 17099 CAAGTAAGCGCAAATTATGCTAATGCTCGAGAAATTGGTTT-GAGCGATATTAATTGGAT 17157 ||| | || || ||||| ||||| ||| |||||||| ||| ||||| ||||||| Sbjct 26763 CAAATTGAAGCTAACTATGCCAATGCGAAAGAGATTGGTTTAGAG-GATATCCATTGGAT 26821 Query 17158 TTGTGATGATAGCTTAGATATAGATGAACATATTGAAAATGAAAGCCAAGACTTGTTATT 17217 || ||||| || ||| |||| ||| | ||||| ||| |||| ||||||||||| | || Sbjct 26822 ATGCGATGACAGTTTAAATATTGATAATCATATAGAAGATGAGAGCCAAGACTTACTCTT 26881 Query 17218 TACATGTCCGCCGTATGCAGACCTTGAAGTTTATTCAGACGATGAACGAGACATTAGTAA 17277 |||||||| || ||||| || | || || || ||| | |||||| |||| |||||||| Sbjct 26882 CACATGTCCACCATATGCGGATTTAGAGGTCTACTCACAAGATGAAAGAGATATTAGTAA 26941 Query 17278 TATGTCCTATGAAGAGTTTGAAGAAGTATATAGTGAAATTTTAAAACGTTCTGCTAGAAA 17337 |||| | || ||| | |||| ||| || ||||| ||||||||||||| || | || || Sbjct 26942 TATGACTTACGAACAATTTGCAGATGTTTATAGCCAAATTTTAAAACGGTCATCAAGGAA 27001 Query 17338 ACTAAAAGATAATCGCTTTGCTGTTGTTACTATTTCAGATGTTCGAGACAAAAAAGGCTT 17397 ||| ||| ||||||| ||||||||| |||||||||| ||||||||||| |||||||| || Sbjct 27002 ACTTAAAAATAATCGTTTTGCTGTTATTACTATTTCTGATGTTCGAGATAAAAAAGGTTT 27061 Query 17398 CTATAGAGATTTAACAGGATTAACTAAACAAGCTTTTTCTGAAGAAGGATTAtttttttA 17457 ||||||||||||||| || || ||||||| | | || | ||||||||| | | ||||| Sbjct 27062 CTATAGAGATTTAACTGGTTTGACTAAACGATCATTAGCCGAAGAAGGAGTCCTCTTTTA 27121 Query 17458 TAATGACATGATTTTATTGAACACTGCTGGTTCTGCAGCATTAAGGGCTAGACAATCAAT 17517 |||||||||||| ||||||| || || ||||| |||||||| | ||||| ||| || Sbjct 27122 TAATGACATGATCCTATTGAATACAGCAGGTTCAGCAGCATTGCGTGCTAGGTTATCGAT 27181 Query 17518 GAACAATAGAAAAGTAGTTAGAATCCACCAAAATGTCTTAGTGTTCTACAAAGGAAATCC 17577 ||| ||| | || || ||| ||||||| |||||||||||||| || || ||||||||||| Sbjct 27182 GAATAATCGTAAGGTCGTTCGAATCCATCAAAATGTCTTAGTATTTTATAAAGGAAATCC 27241 Query 17578 TCAAAAAATTAGTAAGCATTTTGAAGCACTAGAAACATTAGATGATGAGCTAGAAACTGT 17637 | || | |||| ||| ||||||||| | | ||||| ||||||||||| |||||| || Sbjct 27242 TAAAGATATTAATAAACATTTTGAACTATTGGAAACCTTAGATGATGAACTAGAATACGT 27301 Query 17638 ACTGGAATCACTGGACGAATAAAAATCAATCGTTTATGCTCTGCAAGAGGTGATGGATTA 17697 || | |||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct 27302 TATGAATTCACTGGACGAATAAAAACCAATCGCTTATGCTCTGCAAGAGGTGA-AGAGAG 27360 Query 17698 TGACAAATAAAGAACTAAAAAGCGTAGCAGAAAACGCTAGAAGCTTATACAGAAGTAACT 17757 ||||||| ||||||||||||||| | || ||||| ||||||| |||||| |||||||||| Sbjct 27361 TGACAAACAAAGAACTAAAAAGCATTGCCGAAAATGCTAGAACCTTATATAGAAGTAACT 27420 Query 17758 TAATTACTAGGGAAGAAGCAAAAGAACGTATCGAACCATTTATTGAAGCGTAcaataaaa 17817 |||||||||| || |||||||| || | || || ||||| || || || |||||||||| Sbjct 27421 TAATTACTAGAGATGAAGCAAAGAAAAGAATTGAGCCATTCATAGAGGCATACAATAAAA 27480 Query 17818 aatcaaaagaaattgccaagaagtttaatcaaaaaccaaaaacaatCTCTATTGTTTCCT 17877 ||||||||||||| || || || | |||||||| | | ||||| || ||| | | || | Sbjct 27481 AATCAAAAGAAATAGCAAAAAAATATAATCAAACAGCTAAAACGATATCTCTAATATCAT 27540 Query 17878 TTTTACGATAAAAAAGAGACAAGTGCGCTAACACTTGCCTCAATCCAC-AGGATACGAAT 17936 ||||| |||||||| || | |||||||||||||| | || || || |||| || || Sbjct 27541 TTTTAAGATAAAAAGAAGCCGAGTGCGCTAACACTCGACTACTTCAACGAGGAAACTAAG 27600 Query 17937 ACCCCGAAGACACAGAAACCACACGCGCGTGCTTTT----AACCCAGTTCTGTGTCTTTT 17992 ||||||||| ||||| | | | |||||| |||| |||| ||||| |||||| Sbjct 27601 CCCCCGAAGATACAGAGAATGCCCACGCGTGGTTTTCTGATACCC---TCTGTATCTTTT 27657 Query 17993 AGCATTATA 18001 ||||| ||| Sbjct 27658 AGCATCATA 27666 >seq7607 Length=81728 Score = 161 bits (178), Expect = 3e-35 Identities = 253/358 (71%), Gaps = 17/358 (5%) Strand=Plus/Minus Query 14651 ATaaaaaaaGTCGGAATCGCTCCGACC---------AACC--ACATTGATATTATAACAT 14699 |||||||||| |||| |||||||||| |||| ||| ||||||| || Sbjct 72531 ATAAAAAAAGCCGGA-TCGCTCCGACTGATGTAATAAACCCGACAAGTTTATTATATCAC 72473 Query 14700 AAAA-GGAGCGATTTAACTTGATTCAATTGTTAAAAGAAGTTGATTTTAGTAAGACTAGA 14758 |||| |||||| ||| |||| || ||||| ||| ||| || || ||||| |||| ||| Sbjct 72472 AAAAAGGAGCGGTTTGACTTAATGCAATTAATAAGAGATGTAGACTTTAGGCAGACAAGA 72413 Query 14759 GCCAATGCGAGAGCCGTGTTGAAAAATTTTAGACGTTTGGACCGAATAGCTGGTCGTTCC 14818 |||||||||| ||||||||||| || |||| ||||| || || || |||||||| Sbjct 72412 TGTAATGCGAGAGATGTGTTGAAAAACTTCCGACGGTTGGAACGGATGGCAGGTCGTTCA 72353 Query 14819 TTAGTAGATGTTCGGTCGCCAATCATTACAGACATGCCCAAAGGT--ATAACGCATGGCA 14876 || |||| || |||||| || || || |||||||| |||| || || |||| Sbjct 72352 TTGATAGACATTAAGTCGCCGATTATAACTGACATGCC--TAGGTCGCCAAAACACGGCA 72295 Query 14877 ACAAAGCAGAAGATGCGTTGATCCAGATGATTGATGTCGAAGTAGAGCGTGATGCAATCC 14936 ||||| ||||||||||| | || || || || || | |||| ||| | ||||| || Sbjct 72294 ACAAAACAGAAGATGCGCTTATTCAAATAATGGACCTAGAAGCAGAAAGAGATGCGATTT 72235 Query 14937 TAACGGCTTTGATGTCACTAAGCATAATAAGTCGTCAAATTCTTCACTACAGTTTCTG 14994 || || ||||| | || | || ||||||||||| || | || ||||| || Sbjct 72234 TAGTAGCCCTGATGAGTTTGAGTCTTATCAGTCGTCAAATACTCTATTATAGTTTTTG 72177 >seq1820 Length=163924 Score = 109 bits (120), Expect = 1e-19 Identities = 112/146 (77%), Gaps = 3/146 (2%) Strand=Plus/Plus Query 15011 TCTAATTACAAGATTGCTAGAGAAGTTGGCTATTCCGAAAGAAGTATTCAACGCATGAAA 15070 || ||||| |||||| | ||| | || ||||||||||||| ||||| | | ||| Sbjct 6545 TCGAATTATAAGATTAGTCTTGAAATCGGTTATTCCGAAAGAACGATTCAGAGAAAAAAA 6604 Query 15071 TCAGAAGCTTTGATTGAATTTGCTGAAGCTTATCGAAATGGGAAAATAATTGCCTATAAA 15130 ||||||| ||||||||||| |||||||| ||| | ||| ||| | ||||| |||||| Sbjct 6605 GCAGAAGCATTGATTGAATTCGCTGAAGCATATAAGACTGGAAAACTGATTGCGTATAAA 6664 Query 15131 TAAAATTTTGGCGGTTTTTTGGCGGA 15156 ||| ||||||| ||||||||| || Sbjct 6665 TAA---TTTGGCGTTTTTTTGGCAGA 6687 >seq64495 Length=424 Score = 87.8 bits (96), Expect = 5e-13 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 38661 GGACCATTAGCTCAGTTGGTTAGAGCCAACCGCTCATAACGGTTAGGTCATAGGTTCGAG 38720 ||||| |||||||||||||||||||| || ||||||||| || |||| |||||||||| Sbjct 311 GGACCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGAG 370 Query 38721 TCCTGTATGGTCCATA 38736 |||| | |||||||| Sbjct 371 TCCTACAAGGTCCATA 386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126281082754704