Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_013696.1 Length=42822 Score E Sequences producing significant alignments: (Bits) Value seq14859 1168 0.0 seq7607 325 1e-84 seq117586 168 2e-37 seq1820 104 6e-18 seq28223 89.7 1e-13 >seq14859 Length=68005 Score = 1168 bits (1294), Expect = 0.0 Identities = 1474/2012 (73%), Gaps = 26/2012 (1%) Strand=Plus/Plus Query 195 GGTAATCAAAATGCTATAGGCAATAAAGGTAATAGTCGAGCCTCGCCACCAAAAAGAAAT 254 |||||||| || || | || |||||||| ||||| |||||||| || ||| | | || Sbjct 28924 GGTAATCAGAACGCAAAGGGGAATAAAGGCAATAGCCGAGCCTCACCGCCAGTAGGGAAC 28983 Query 255 AAGAATGCTGTTAAAACTGGCGAATACGAAACAATATTTGCCGATATGTTATCTGACGAA 314 ||||| ||| | ||||||||||| || ||||| |||||| ||| | ||| || ||| Sbjct 28984 AAGAACGCTTTGAAAACTGGCGAGTATGAAACCATATTTTACGAAACATTAAGCGATGAA 29043 Query 315 GAAAAGGACATCTATTCTACTATGAATGATGATCCtttttttATTTTGGATGAAGAAATA 374 || |||||||||||||||| | ||||| ||||||||| |||| ||||| ||| ||||| Sbjct 29044 GAGAAGGACATCTATTCTAGTTTGAATAATGATCCTTCTTTTGTTTTGTCTGAGGAAATT 29103 Query 375 AGAATCCTGAAAATTCGCCAATATAGAATGCTTAAACGCATAAAAGATGCAGAGGCTGGC 434 | | | || || | || | ||||| | ||| | ||| | | || |||||||| Sbjct 29104 CGTTTGTTAAAGATAAGACAGTTGCGAATGATGAAAAGAATACAGAAAGCCGAGGCTGGT 29163 Query 435 TTAAATGATGAAGAAGTTGAACGTTTGCAGCAGCTTCGCAAAGTTAAAGAGCCATCGGTA 494 ||||| ||||||||| | |||||| |||| ||| | | ||| | ||| ||| | | Sbjct 29164 TTAAACGATGAAGAAATCGAACGTCTGCAACAGTTAAGAAAAATCAAAACGCCGATTGAA 29223 Query 495 ATTGATGGGAAAATGGTTACTGTTAAGAGAGAAGTTTTAAAAGATGTACAAGTCACTCGT 554 | | || | || | | | || |||| ||| | ||||||| ||||| | | Sbjct 29224 AAAAACGGTAGAAAGTTAGAAATCAAACGAGAGGTTATGCAAGATGTTCAAGTTAGCAGA 29283 Query 555 AAAACATTTAGAAAGTTAGATGACATCCTGGCTATTGAAGATGCGTTGACTCGCGTTAGC 614 |||| | | | || | |||||||| || | ||||||||| | || ||||| ||||| Sbjct 29284 AAAAAACATCGCAAAATTGATGACATTCTTTCAATTGAAGATTCATTAACTCGGATTAGC 29343 Query 615 AATCAATTAATAAAGGCGATTAAGCAACAAAAAGAATTATTGTCGACAGATAAAAAATCT 674 ||||| ||| || || ||||||||| || ||| ||| || ||| | ||| || Sbjct 29344 AATCAGTTAGCTAAAGCCATTAAGCAAATGAATGAACTATATATAACGGATTACAAAACT 29403 Query 675 CTTTTAATGGAGGCTCAAATTGAGAAGATA-AAGCTTGAGACAGACAAATTAAGTGGCGG 733 ||||||| | || |||| ||||| || ||||| || |||| | || | | |||| Sbjct 29404 GATTTAATGAAAGCACAAACCGAGAAAATTCAAGCT-GAAACAG-CTGAT--ATTAGCGG 29459 Query 734 --ATCAT-CTAACGATGAAGCTGACTCTTGGAAACAAGCAGTTATAAATGCAGCAAATAA 790 || || || ||| |||| || ||||| ||||||||| |||||||||||||||| Sbjct 29460 TAATAATTCTGGCGAAGAAGTGGAAGAATGGAAGCAAGCAGTTTTAAATGCAGCAAATAA 29519 Query 791 GCGGGCGGTGGAAGAAAATGAATAAAGAGTTTATTCCGTTTGCCGATATTGGTGCAGCAA 850 |||| |||| ||| | ||| | || |||||||| ||||| |||| ||||| || | Sbjct 29520 ACGGGTGGTGAGAGAGAGTGAGCAGTGATTTTATTCCTTTTGCTAATATAGGTGCTGCGA 29579 Query 851 TTGATTACTACTACGATAAACCAGTTGCTTTTTGTCAGGATATTTTGCATCTTGATCCAG 910 ||||||| ||||| ||||| ||||| |||||||| || || || |||||| | ||||| | Sbjct 29580 TTGATTATTACTATGATAAGCCAGTAGCTTTTTGCCAAGACATATTGCATTTAGATCCTG 29639 Query 911 ATGAATGGCAGGATAAGGTCTTGGATGATTTGGCTAAATTCCCAAAAGTCTCAGTTAGAT 970 ||||||||||||| | || ||| ||||||||||| |||| | ||| || |||||| | | Sbjct 29640 ATGAATGGCAGGAAAGTGTTTTGAATGATTTGGCTGAATTTCAAAAGGTTTCAGTTCGTT 29699 Query 971 CAGGGCAGGGTGTTGGAAAAACGGCGTTGGAGGCTGGTGCTATTCTTTGGTTTCTAACAT 1030 | || || |||||||| ||||| || || || || || || || ||||||||| |||| | Sbjct 29700 CTGGACAAGGTGTTGGGAAAACAGCATTAGAAGCAGGAGCAATACTTTGGTTTTTAACTT 29759 Query 1031 GCCGGCCATATGCAAAAGTAATAGCAACTGCTCCGACGATGAAACAATTATACGATGTTC 1090 | || ||||| || ||||| || || || || || || ||||||||| | |||||||| | Sbjct 29760 GTCGACCATACGCTAAAGTGATTGCTACAGCGCCAACCATGAAACAACTTTACGATGTAC 29819 Query 1091 TATGGGCAGAAGTGGCTAAGTGGCTGAATAACAGCTTGATTAAAGACTTACTTAAATGGA 1150 | ||||| ||||| ||||| ||| | ||| | |||||||| ||| ||||||| || |||| Sbjct 29820 TTTGGGCGGAAGTAGCTAAATGGTTAAATGATAGCTTGATCAAAAACTTACTGAAGTGGA 29879 Query 1151 CCAAGACGAAAATTTATATGGTTGGCGATTCAGAACGATGGTTTGCTACAGCTCGAACAG 1210 | ||||| ||||||||||||||||| ||||| || || ||||||||||||||| |||||| Sbjct 29880 CAAAGACCAAAATTTATATGGTTGGTGATTCTGAGCGTTGGTTTGCTACAGCTAGAACAG 29939 Query 1211 CAACTAAACCAGAAAATATGCAAGGATTTCACGAAGACCATATGTTAATAGTGGTTGATG 1270 |||| || ||||||||||||||||| ||||| |||||||||||||| || || || |||| Sbjct 29940 CAACGAAGCCAGAAAATATGCAAGGGTTTCATGAAGACCATATGTTGATTGTTGTAGATG 29999 Query 1271 AAGCATCAGGTGTTGCTGATCCCATTATGGAAGCAATATTAGGTACTCTTTCAGGATTTG 1330 |||| || ||||| ||||||| ||||||||||| || | ||||| || ||||| |||| Sbjct 30000 AAGCTTCTGGTGTATCTGATCCAATTATGGAAGCTATTCTTGGTACGCTATCAGGTTTTG 30059 Query 1331 ACAATAAATTACTAATGTGTGGGAACCCCAACAATATTGAAGGGGTTTTTTATGATTCGC 1390 | ||||| || | |||||||||||||| || ||||||||||| || ||||| ||||| | Sbjct 30060 ATAATAAGCTATTGATGTGTGGGAACCCAAATAATATTGAAGGTGTCTTTTACGATTCCC 30119 Query 1391 ATAATACAGATAGAGACAAGTATAGAACGCACAAAGTTTCTAGTTACGATAGCAAACGTA 1450 | ||| |||| | || || || ||| || ||||| |||||||||||||| ||||| | Sbjct 30120 ACAATTCAGACCGTGATAAATACAGAGTTCATAAAGTATCTAGTTACGATAGTAAACGCA 30179 Query 1451 CTAACAAAGAAAATATTCAAATGCTCATCGATAAGTATGGTGAGAATAGCGATGTAGCTC 1510 | |||||||| || || ||||| | | | |||||||| | | |||||||| |||| Sbjct 30180 CAAACAAAGACAACATAGAAATGATTCTTAAAAAGTATGGAAAAGAAAGCGATGTTGCTC 30239 Query 1511 GTGTTCGTATTTATGGTGAATTTCCCAAAGGCGCACTTGATTCATTTATCAGCCTTGAAA 1570 |||| ||||||| ||| |||||||| ||||| || | |||||||||||||| ||||||| Sbjct 30240 GTGTCCGTATTTTTGGAGAATTTCCTAAAGGTGCGTTGGATTCATTTATCAGTCTTGAAA 30299 Query 1571 TTGTTGAGTTTGCCAAAGATATTAATATTTCTGATTC---AG-AATTAAAACATGTTAGA 1626 ||||| || || | ||| | | ||| |||||| || | ||||||| | Sbjct 30300 CGGTTGAATTGGCTACAGAAAAACAAATTAGTGATTCTTTAGTCAATAAAACA----ACG 30355 Query 1627 GAAGGACACATAGGTGTCGATGTGGCTCGTTTTGGTGATGATTCAACGATAGTATTTCCT 1686 | | || || |||||||| || ||||| | |||||||||||| ||||| | || ||| Sbjct 30356 GTTGCTCATATTGGTGTCGACGTAGCTCGGTATGGTGATGATTCTACGATTCTTTTCCCT 30415 Query 1687 AGAATCGGAGCTAAAGCATTGCCATTTGAAAAATATAGTAAGCAAGATACCATGCAGACC 1746 ||||| | ||| ||||| | ||| |||||| || | |||||| | || Sbjct 30416 AGAATTGCTACTAGGGCATTAGAGTATGAGAAATATTCAAAACGTAGCACCATGGAAACA 30475 Query 1747 ACTGGTCGAGTTTTAAAAGCGGCGAAAAGGATGATGGATGACTATCCTACAATaaaaaaa 1806 || || || | || ||| || | | ||| | | ||||| | || | ||| Sbjct 30476 ACAGGATATGTCATCAATATGGCCAAGAATCTAATGAGTCAATATCCAAGTATTGATAAA 30535 Query 1807 GTGTTCATCAAAGTAGATGATACAGGTGTTGGTGGAGGTGTTACTGATAGACTTAAAGAA 1866 ||| | || ||||| ||||| || ||||| || || ||||| ||||| | || ||||| Sbjct 30536 GTGATGATTAAAGTTGATGACACTGGTGTCGGAGGTGGTGTAACTGACCGCCTAGAAGAA 30595 Query 1867 GTAATTAGCGATGAAAAAC---TTCCCTATGAAGTAATTCCGGTAAATAATGGAGAATCT 1923 |||| || || || | ||| | ||| || || || |||||||| | | Sbjct 30596 TTAAT---AGAAGACAATCAGTATCCTTTTGAGGTGCTTGGAGTGAATAATGGTTCAACA 30652 Query 1924 TCTACAGACGATTATTATGCAAATAAAGGAACACAAATATGGGGAGATGTTAAAGAACTG 1983 || |||||||| ||| | ||| ||| || ||| |||||||| || | || ||| || Sbjct 30653 TCAGAAGACGATTTTTACGATAATTTAGGTACTCAACTATGGGGAAATATCAAGGAAATG 30712 Query 1984 TTAGAACAAAACATTTC--CAATTCGATTAATGGTCAAGGGCCGACGATAGAACTTCCTG 2041 |||||| |||| || | ||| || |||| ||| || |||| || ||| | |||| Sbjct 30713 TTAGAAGAAAATATGACAGCAAATC--TTAACGGTGAACAACCGATTATTGAATTGCCTG 30770 Query 2042 ATAATGCAAATCTAATCAAAGAATTGAGCACACGTAAATTTAAAATGACTAGCAATGGAA 2101 || ||| | | || |||||| |||| ||||||||||| |||||||| || | | Sbjct 30771 ATGATGGATCGTTGATTAAAGAACTGAGTACACGTAAATTCAAAATGACGAGTAGAAGTC 30830 Query 2102 AAATCCGTTTAGAAAGTAAAGAAGATATGAAAAAGCGTAATGTTGGCAGTCCAGATATTG 2161 || ||||||||||||||||| |||||||||||||| || |||| ||||| ||||||| Sbjct 30831 GTATTCGTTTAGAAAGTAAAGATGATATGAAAAAGCGAAACATTGGTAGTCCCGATATTG 30890 Query 2162 CTGATGCGTTAACGTTAGCGTTTTACGAGCCA 2193 |||||||||| | ||||| ||||| |||||| Sbjct 30891 CTGATGCGTTGGCTTTAGCATTTTATGAGCCA 30922 Score = 244 bits (270), Expect = 3e-60 Identities = 299/403 (74%), Gaps = 9/403 (2%) Strand=Plus/Plus Query 19453 GAATAGAACAGTTAGaaaaaaaaGTAGAAAAACATAATGGTGTAATTGAAAGAACCTTTA 19512 |||| ||||| || || |||||||| ||||| ||||| | | ||||| | || ||| Sbjct 48077 GAATTGAACAATTGGAGAAAAAAGTTGAAAAGCATAACCATATTGTTGAACGTACTTTTC 48136 Query 19513 AATTAGAAGGTCGAATGCAAGAAGCGGAACACGACATAATAGAATTGAAAGGAG-Caaaa 19571 ||||||||| || ||| | ||||||||||| || || ||| ||||||||| | | | Sbjct 48137 TATTAGAAGGACGGATGAATGAAGCGGAACATGATATTCAGGAAATGAAAGGAGGCGAGA 48196 Query 19572 a--aaTGATTCTACCAGATAAGTACTACAAAATTATCAAATGGGGAGTACTTACTGTGCT 19629 | ||||||| || ||||||| || || ||||||| |||||| ||||||||| || | Sbjct 48197 AGTAATGATTTTATCAGATAAATATTATCAAATTATTAAATGGACAGTACTTACGGTATT 48256 Query 19630 TCCAGCCATATCTGTTTTAGTAGCAACGTTAGGCAAAGGTTATGGATGGCAGCAAACAGA 19689 || || | || || ||||| ||||| ||||||||| ||||| ||| |||||| Sbjct 48257 ACCTGCAGTGTCGGTATTAGTTGCAACACTAGGCAAAGCATATGGTTGGGGAGGAACAGA 48316 Query 19690 TATGGCTGTTTTAACTATCAATGCCATTGCAACTTTTTTAGGAGTAGTAACAGGTGTGTC 19749 |||| | ||| | ||||||||||| | || || |||||||| ||| |||| |||||||| Sbjct 48317 TATGACAGTTCTGACTATCAATGCAGTAGCGACGTTTTTAGGTGTAATAACTGGTGTGTC 48376 Query 19750 AGCATATAATTTAAAAGACAAGGAGTAAACGAATGAAAAAGAAAAT--TTTAGTC--GGA 19805 |||||||| |||||| | ||||| || |||||| || ||||| ||| || || Sbjct 48377 TGCATATAACTTAAAAAAATAGGAGGGAAAAAATGAAGAAAAAAATCATTTTATCATTGA 48436 Query 19806 GCGT--TAATCGCTCTATTTTTTATGCCTTTAAATGTATTTGC 19846 || | |||| ||||| ||||| | ||||| |||| ||||| Sbjct 48437 GCCTACTAATGGCTCTTTTTTTATTACCTTTGAATGCTTTTGC 48479 Score = 239 bits (264), Expect = 1e-58 Identities = 246/322 (76%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 40388 AATGCATATTGAAAAAATGAAATTATCAGATTTAAGGCCGGCGGAATATAATCCAAGAGT 40447 |||||| |||||| |||||||||| ||||||| || || || |||||||||||||| Sbjct 25985 AATGCAAATTGAATTAATGAAATTAGAGGATTTAAAACCAGCAGATTATAATCCAAGAGT 26044 Query 40448 AAAATTGAATCCAGGTATGGCAGAATATGAAAAACTTAAACAATCAATTTTAGAATTTGG 40507 || || | || ||||||| ||||| || || | ||||| || |||||||||||||| Sbjct 26045 TAAGTTAGAACCTGGTATGGACGAATACGAGAAGTTAAAACAGTCCATTTTAGAATTTGG 26104 Query 40508 CTTTGTTGATCCTCCCATTTTTAATAAAAATACAGGAAACTTGGTTGGTGGACATCAACG 40567 |||||||||||| || |||||||| || ||||| || | || ||||| |||||||| Sbjct 26105 CTTTGTTGATCCACCTATTTTTAACAAGCGAACAGGCAATCTCGTCGGTGGTCATCAACG 26164 Query 40568 CGTTACTGTTGCAAAAGAATTGGGGCTATTTGATGAGATAGAGGTTTCTGTGGTTGATTT 40627 ||| |||| || ||||| ||||| ||| || ||||||||||| || || || |||| Sbjct 26165 TGTTGCTGTGGCTAAAGATTTGGGCGTATGCGAAGAGATAGAGGTATCGGTAGTATATTT 26224 Query 40628 ACCATTGGATAAAGAGAAAGCTCTAAGCATAGCTTTAAATAAGATTTCTGGAAATTGGGA 40687 | | | || ||||| ||||| || | | ||| | ||||| |||||||| ||||| Sbjct 26225 ATCCCTAGAGAAAGAAAAAGCGCTCAATGTGGCTCTCAATAAAATTTCTGGTCGATGGGA 26284 Query 40688 TGAAGATAAACTAACAGAATTA 40709 |||||||||| || |||| ||| Sbjct 26285 TGAAGATAAATTATCAGAGTTA 26306 Score = 170 bits (188), Expect = 5e-38 Identities = 159/201 (79%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 27484 TTATTTGAACAAATCCCAAAAGCTAAAAGTTGTTTTATTATATACTTTATTATACATAGC 27543 |||||| || || |||||||||||| | || || || ||||| | |||||| || ||| Sbjct 12081 TTATTTAAATAAGTCCCAAAAGCTATACGTAGTCTTTTTATAAATTTTATTGTATGCAGC 12140 Query 27544 TTTCTTGGGGTTCTTAATGAAACCAGTTCCTTTTTGCCCATAACCAGGAATTACTGCTTT 27603 ||| ||||| | ||||| | |||| ||||| | |||||||||||||| |||||||| Sbjct 12141 TTTTTTGGGTCT-TTAATCCATCCAGAGCCTTTCTTGCCATAACCAGGAATCACTGCTTT 12199 Query 27604 TTTAAACTTACGTTTAGCTTTTCCAGTAGTACGAGCACTTATTGAtttttttATACTTGG 27663 ||| | || | ||| || ||||||||||| | ||| || || ||||||||||||||||| Sbjct 12200 TTTTATTTTCCTTTTTGCCTTTCCAGTAGTTCTAGCGCTAATAGATTTTTTTATACTTGG 12259 Query 27664 TTTACGCATTCCTACTTTCAT 27684 ||| | |||||||| |||||| Sbjct 12260 TTTTCTCATTCCTATTTTCAT 12280 Score = 111 bits (122), Expect = 4e-20 Identities = 99/120 (83%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 41502 ATAAAAAGA-GACAAGTGCGCTAACACTTGCCTCAATTCAACGAG-ATACGAATACCCCG 41559 ||||||||| | | |||||||||||||| | || | ||||||||| | || || ||||| Sbjct 27548 ATAAAAAGAAGCCGAGTGCGCTAACACTCGACT-ACTTCAACGAGGAAACTAAGCCCCCG 27606 Query 41560 AAGACACAGAGAATTCCCACGCGTGGATTTTCGACACCCTCCGTGTCTTTTAGCATTATA 41619 |||| ||||||||| ||||||||||| ||| || |||||| || ||||||||||| ||| Sbjct 27607 AAGATACAGAGAATGCCCACGCGTGGTTTTCTGATACCCTCTGTATCTTTTAGCATCATA 27666 >seq7607 Length=81728 Score = 325 bits (360), Expect = 1e-84 Identities = 1028/1573 (65%), Gaps = 41/1573 (3%) Strand=Plus/Minus Query 2233 ACGTTCAAAAAATTAGGATTAAGTAGGTGATAGAGTG------AATAATAAATTATTGAA 2286 || || |||||| ||||||| |||||||| |||| |||| | | | || | Sbjct 68304 ACATTTAAAAAACTAGGATTGTAGAGGTGATACAGTGGTACAGAATATTCAGCTTTTAAG 68245 Query 2287 CGGTTCTAGATTTGATAAAGAAGCAAATCTAGTTTATAAAGTGCCAGTAAGCAAACTGCC 2346 || |||||||| | ||||| || || || ||||||||||| || | || |||| Sbjct 68244 TGGCAAGCGATTTGATGATGAAGCGAACCTTGTCTATAAAGTGCCGGTTAATGAATTGCC 68185 Query 2347 TACTCGAATAATGCAATATT--CGAAC-GGAGAAAAAGAAGAAGTCGTAGATTTTGAGCA 2403 | || |||| | || || || || ||| ||| | || | || ||||| || Sbjct 68184 AAAAAGAGAGATGCTAAATCAGCGTACTGGCGAAGTTGAACAGGTAATCGACTTTGAACA 68125 Query 2404 TCAAGATGTTTTTAATATGATTGTAAAATTTGTTCGACACCATAAAGAAAAACAAGTTCC 2463 |||| |||| || |||||||| | || | ||||||| || || ||||| || Sbjct 68124 CGAAGACGTTTGGAAGATGATTGTTGAGTTCATCAAACACCATCGAGCCAAGCAAGTGCC 68065 Query 2464 TCGCCTTAAAGAATTAAAGCGTTATTCTTTAGCGCAA-AATAATATTAAGTTTACTGAAG 2522 | | | ||| | || || ||| |||| |||| || || || || | | | Sbjct 68064 AAGGTTGCAGGAACTGAAACGCTATATGTTAG-GCAACAACAACATCAATTATCGTCCGA 68006 Query 2523 ATAAAAGTGAAAATCGAGCAGACAACAAGATTGCAAATGATTGGGCTAGATTT-ATTGTC 2581 | ||| ||| | || | ||||| || |||| || | || |||||| || ||| Sbjct 68005 ACAAACCAGAAGGTAGATCGGACAATCGTATAGCAAGTGGCTTTGC-AGATTTTATCGTC 67947 Query 2582 AATTTTAAAAAAGGCGTGTTATTAGGTAATCCTTTGAAGTACAATGGCGATAAAACTATA 2641 ||||| |||||| || |||| || || ||||| |||| ||| ||| | | || Sbjct 67946 TCATTTAAGTTAGGCGTATTGCTAGGGAACCCATTGAAATACAGTGGGGATCAGGCGATT 67887 Query 2642 GCTGACAAAATTAATGATTTTTCTAGCAAATCAAATGAAGATTATCATAATCAGTTAATG 2701 || || ||||| || ||| |||| |||| |||||||| || || |||||||| || Sbjct 67886 GCAGAAAAAATCAACACATTTGCTAGTCAATCGAATGAAGACTACCACAATCAGTTGGTG 67827 Query 2702 T-TAGACGACTTACTCGTTTATGGAAGAGCGTTTGAATATATTGGTAGAGATGAATACGG 2760 | || | | | | ||| || ||||||| ||||| ||||| | ||||| ||||| Sbjct 67826 GGTCGAGATATGATTGGATTA-GGTAGAGCGTATGAATGGATTGGGCGTGATGAGTACGG 67768 Query 2761 TAAAGAAATGTTAGCTAAATTCAGTGCAGAAGAGACGTTCGTTATTTATGATACAACGAC 2820 ||| |||| ||||||| || |||||| | |||||||| || || || |||| | Sbjct 67767 TAAGGAAACACTAGCTAAGTTTGACGCAGAACAAACGTTCGTAATCTACGA--CAACACC 67710 Query 2821 AAACAAG--AATTCTGTATGTGCTATTCACTGTTATGATCTGGAGTTTAACGATGAAACA 2878 ||| | || || |||| | |||| | ||| | ||| | ||| | | Sbjct 67709 AAAGATCGCAACTCATTATGCGGAGTTCATTACTATAAAGAAAAGTATCTAGATAAGTCG 67650 Query 2879 TTTAGTTATATCGATATTTATGCCAATGATGGCT---ATTTTTATCAACATGAATCAAAA 2935 | | | || | ||| | || || | ||| ||||| ||| || || Sbjct 67649 TGGACACGAGTTGAACTATATACAAACAGCGGATTCAATTATTATCT-CATCG--CAGAA 67593 Query 2936 AATCAAGACTATGAACAA-TCTAAATTAAT--TGATAAA--TATC-AAACTTTCTTTGAT 2989 ||| | |||| ||||| || ||||| | || | || ||| ||| || ||| ||| Sbjct 67592 AATGATGACTTAGAACATGTCAAAATTGAAGATGGTGAAAGTATTGAAAGTTACTTCGAT 67533 Query 2990 TCTATTCAAGTAAATGAATGGATTAACAATGAAGAGCGTTTAGGAGACTTTGAAACAGTT 3049 || |||| || ||||||||||| ||||| ||||| ||||| | |||||||| || Sbjct 67532 TCGGTTCAGGTTAATGAATGGATCAACAACGAAGAACGTTTGAGCGACTTTGAGCGCGTA 67473 Query 3050 TTAGATAATATAGATGCATATGATTTATCACAATCTTCAATGGCTAATTTCCAACAAGAT 3109 | ||| |||||||| |||||| | || | ||| ||| | ||||||||||||||| Sbjct 67472 CTTGATTCCATAGATGCCTATGATCTTTCTCGCTCTGAGATGTCCAATTTCCAACAAGAT 67413 Query 3110 TCATCTGAAGCTTATTTAGTTATTAAAGGAAACCCCGAAACTGCTATAGGTGATGAAGAA 3169 ||||| |||||||| || || |||||||| || || || ||||| || ||||||| || Sbjct 67412 TCATCAGAAGCTTACTTGGTGATTAAAGGCAATCCAGATACTGC---AGATGATGAACAA 67356 Query 3170 GGT-AATTCTGCA--GTAGACGTTTTAAACGACATGATAAAAGCTAGATTGTTAATATTA 3226 ||| | | ||| |||| || | | | ||||| ||| ||| || | | ||| Sbjct 67355 GGTGACAACAGCAAGTTAGATGTACTCCAAGCTATGATGCGAGCGAGAATGCTTGTTTTA 67296 Query 3227 GGGGATAAGAA-ATATTATGGTGATGGTCAAACAGGTAGCGATCCTGATGCATACTATTT 3285 || |||||||| ||| |||| | | | |||| || ||||||||||| ||| | Sbjct 67295 GGCGATAAGAAGATA-TATGACGGCAATATAGCAGGCGCTGAACCTGATGCATATTATCT 67237 Query 3286 GAAAAAAGAGTATGATACACAAGGAACAGAGGCATATAATGACCGTTTGGTTTCTGACAT 3345 || |||||||||||| || | || || | || | | ||| | || || Sbjct 67236 AAAGAAAGAGTATGATGTCGCTGGTATGGAAGCTAACGATAGCAGAACAGTTGCGGATAT 67177 Query 3346 GTTGCGCTTCACTTCTTTAATTGATTTTACTGACGAAAACATTGGTAGTAATCAGTCTGG 3405 || ||||| || ||| | ||||| ||||| ||||| || || || ||||||||| || Sbjct 67176 CTTACGCTTTACATCTCTCATTGACTTTACGGACGAGAATATAGGATCTAATCAGTCAGG 67117 Query 3406 TATTGGATTTAGATTTAAAGGTTGGGGAAGTGACAATGATAGAAAGANNNNNNNNNNNNN 3465 ||| ||||| | || ||||| ||||| ||||| ||| | || | Sbjct 67116 TATCGGATTCCGCTTCAAAGGCTGGGGGTCAGACAACGATCGTAAAAATAAAGAGCGTAT 67057 Query 3466 NNNNNNNNNNGCAATCATGAGAAGACTAAGATTATTAACTTATTCTTGGTCATTGAAAGA 3525 || || ||| | | || |||| | ||| | || ||| | ||||| Sbjct 67056 GGTCAAGAAAGCCATTATGCGCCGTTTACGATTGCTCACTCACTCATGGAGCATCAAAGA 66997 Query 3526 TAACTTAAATAAACCAACAGGGCTTG-CTGAGAAAGTTAAGTCtttttttGTATCTAGAG 3584 | | || |||||||| || |||||| ||| | ||| || | |||||||| || | Sbjct 66996 TGAATTGAATAAACC-TCAAGGCTTGATTGATACAGTCAAAGCCTTTTTTGTTTCCGATG 66938 Query 3585 ATAATGATAAAGAGCTGCTTTTTGAAAAGGTGAATGCTATAGAGATATTATTTACACCAA 3644 | | | |||||| || | | || ||||| | || | || ||||||||| | Sbjct 66937 AACAGCAACAAGAGCAACTATACAACAAAGTGAACGAAATCCAAATTCAATTTACACCGA 66878 Query 3645 ACGTTCCTCAATCGGATAAAGAAATTATGGAAGTTATTGCCGGAATGGTTGGAATTGTTT 3704 | || || ||||| ||| ||||||| ||| ||||||| |||||||||||||| || || | Sbjct 66877 ATGTCCCGCAATCTGATGAAGAAATCATGAAAGTTATCGCCGGAATGGTTGGCATCGTAT 66818 Query 3705 CAGACGAAACACTTTGCGAAATGGCGGCTAAATTGACTGGTGTTCCTGTTCAAACAGAAC 3764 |||| |||| | ||||||||||| | |||||||||||||| || || ||||| Sbjct 66817 CAGATCAAACGTTGTGCGAAATGGCTGAGCGCTTGACTGGTGTTCCGTTTGAAGAAGAAC 66758 Query 3765 TAAATAGGTTGAA 3777 | || | ||||| Sbjct 66757 TGAAACGATTGAA 66745 Score = 306 bits (338), Expect = 1e-78 Identities = 409/564 (73%), Gaps = 10/564 (2%) Strand=Plus/Minus Query 33766 GACCATACAGAATACACTTACGCTGGTTTGTGTCGATGCCATCACACCGAAAAACATAAC 33825 || ||| ||||||||||||| | || | || || ||| ||||| ||||||||| | Sbjct 81698 GATCATTCAGAATACACTTATTCAGGACTTTGCAGAATCCACCACACGGAAAAACATCAA 81639 Query 33826 ATTGGT---ATTACAGCATTTAAGAAA-AAATATCATGTTAAAGGTATCAAATTGAACCA 33881 | ||| |||| |||| | ||| |||||||| | ||||| || || || ||||| Sbjct 81638 CTAGGTGTGATTA----ATTTCAAAAATAAATATCAAATCAAAGGGATTAAGTTAAACCA 81583 Query 33882 AGAAACTATCAAAAAATTACACATAGGAGGCTAGATAAGTGGCTGAAATTAGCTGGATAA 33941 |||||| |||||| | || | || ||||| || | || |||||||||| || ||||| | Sbjct 81582 AGAAACAATCAAACGACTAAAAATTGGAGGATA-AGAA-TGGCTGAAATAAGTTGGATTA 81525 Query 33942 AATTAAGTACTAGTTTACCTGATAATAAGAAAATCAAACGAATACGCAAATTGCCAGATG 34001 | | || || ||||||| ||||| || || || ||| |||| | ||| |||| || | Sbjct 81524 AGCTGAGCACAGGTTTACCAGATAACAAAAAGATTAAAAGAATTAGAAAAATGCCTGACG 81465 Query 34002 GCGATCGAGTAATTTTGTTTTGGGTATTTTTACTAGCTCGTGCTGGTGAAAGCAACCAAA 34061 | ||| ||||||||| |||||||||||||||||||| | || || ||| || || Sbjct 81464 GGGATAAAGTAATTTTATTTTGGGTATTTTTACTAGCAAGAGCAGGAGAAGTGAATAGAA 81405 Query 34062 AAGGCGGATTGTTTTTAACTGATACTTTGCCCTATTCAGATGAAGATTTAGCAGCTGATT 34121 ||| ||||||||| | || || || || ||||| || || || |||||||||||||||| Sbjct 81404 GAGGAGGATTGTTTCTGACAGAAACCTTACCCTACTCGGAAGAGGATTTAGCAGCTGATT 81345 Query 34122 TTGATTTCACAGTTGAGTTTGTAAAATTTGCCATTTTAACTTTAGAAAAATACAGCATGG 34181 ||||||| || ||||| |||||| || || | | |||||||| | |||| |||| Sbjct 81344 TTGATTTTACCGTTGAATTTGTACGTTTCGCTTTACTTACTTTAGAGAGATACTCAATGG 81285 Query 34182 TAACAACCTATGAAGATGTAATTTTCATTAAGAATTGGGAAGAATACCAGGCCATTGATG 34241 | ||| ||||||||| | |||| || || ||||||||||| || || | || || | Sbjct 81284 TTACACGCTATGAAGAAATCTTTTTTATAAAAAATTGGGAAGAGTATCAATCAATCGAAG 81225 Query 34242 GTATGGAAAAAGTCAAAGAGCAAAATCGCATTAGACAAGCGAAATACCGAGAAAAACAAA 34301 | | |||||| | | ||||||||| | | |||||||| |||| | ||||||| Sbjct 81224 GACTAGAAAAAATTAGAGAGCAAAACAGATTGAGACAAGCCAAATTTAGGAGTAAACAAA 81165 Query 34302 AGCAACTGTCATTAAGTAACGTTA 34325 | || || || | |||||||| Sbjct 81164 AACAGCTTTCTCTGGATAACGTTA 81141 Score = 197 bits (218), Expect = 4e-46 Identities = 225/297 (76%), Gaps = 14/297 (5%) Strand=Plus/Minus Query 5484 CTTTTTATATTGCCTTCTTACTGCTTGCAGGCATTAAAGAGAAAGCTGTTTCGATTGATA 5543 |||||||| ||||||||| |||||| |||||| |||||||||||||||| ||| ||| Sbjct 64041 CTTTTTATTATGCCTTCTTCCTGCTTACAGGCACTAAAGAGAAAGCTGTTCCGACTGACT 63982 Query 5544 GGCGTAACTTATCAAATATATCGGGTAGCGGCGTAACCGTGGAGGA-TAATCATGAAAAC 5602 ||||||||| | |||| ||||||||| |||||||||||||||||| |||||||||| | Sbjct 63981 GGCGTAACTAGTTAAAT-TATCGGGTAACGGCGTAACCGTGGAGGACTAATCATGAAGAA 63923 Query 5603 aaaaaaaCTATTATTGCCAATGCATTTACAATTCTTTGCTGATAATCTAGATACTGGCAC 5662 |||| ||||| |||| ||| || |||||| ||||||||| |||| ||| ||||| Sbjct 63922 AAAACGTTTATTAATGCCTATGAATCTACAATACTTTGCTGAAAATCCAGAGGGTGGCAA 63863 Query 5663 TGGGGGTACGGACCAACCGGCCGGAGGTCAAGAGCAAACACCGCCAGGAGATGGCGGCAA 5722 | | ||| ||| ||||| || | ||| | || || || | || | | Sbjct 63862 T---GATAC--ACC-----GCCGGCGG--ATGAGAAGACGCCACCTGAAGGTAAACAACA 63815 Query 5723 AGATAAAGGTAATGGAAAAACGTTTTCTCGTGATGAAGTAGCAAAAATGATTGCTGC 5779 | | ||| | ||| ||||| ||||||||||| || ||||||||||||||||| || Sbjct 63814 GGGTGAAGAGACTGGCAAAACATTTTCTCGTGACGACGTAGCAAAAATGATTGCCGC 63758 Score = 181 bits (200), Expect = 3e-41 Identities = 278/391 (71%), Gaps = 23/391 (6%) Strand=Plus/Minus Query 38939 ATaaaaaaaGTCGGAATCGCTCCGACC---------AACC--ACATTGATATTATAACAT 38987 |||||||||| |||| |||||||||| |||| ||| ||||||| || Sbjct 72531 ATAAAAAAAGCCGGA-TCGCTCCGACTGATGTAATAAACCCGACAAGTTTATTATATCAC 72473 Query 38988 AAAA-GGAGCGATTTAACTTGATTCAATTGTTAAAAGAAGTTGATTTCAGTCAGACTAGA 39046 |||| |||||| ||| |||| || ||||| ||| ||| || || || || ||||| ||| Sbjct 72472 AAAAAGGAGCGGTTTGACTTAATGCAATTAATAAGAGATGTAGACTTTAGGCAGACAAGA 72413 Query 39047 GCCAATGCGAGAGCCGTGTTGAAAAATTTTAGACGTTTGGACCGAATAGCTGGTCGTTCC 39106 |||||||||| ||||||||||| || |||| ||||| || || || |||||||| Sbjct 72412 TGTAATGCGAGAGATGTGTTGAAAAACTTCCGACGGTTGGAACGGATGGCAGGTCGTTCA 72353 Query 39107 TTAGTAGATGTTCGATCACCAATCATTACAGACATGCCCAAAGGTAT--AAAGCATGGGA 39164 || |||| || || || || || || |||||||| | ||| ||| || || | Sbjct 72352 TTGATAGACATTAAGTCGCCGATTATAACTGACATGCCTA--GGTCGCCAAAACACGGCA 72295 Query 39165 ACAAAGCAGAGGATGCGTTGATCCAGATGATGGATGTTGAAGCAGAACGTGATGCAATTT 39224 ||||| |||| |||||| | || || || ||||| | ||||||||| | ||||| |||| Sbjct 72294 ACAAAACAGAAGATGCGCTTATTCAAATAATGGACCTAGAAGCAGAAAGAGATGCGATTT 72235 Query 39225 TAACAGCTTTGATGTCCTTAAGCATAATAAGTCGTCAAATTCTTCACTACAGTTTCTG-- 39282 || ||| ||||| || || | || ||||||||||| || | || ||||| || Sbjct 72234 TAGTAGCCCTGATGAGTTTGAGTCTTATCAGTCGTCAAATACTCTATTATAGTTTTTGCG 72175 Query 39283 -TGTGCAGGACCATTACTCTAATTATAAAAT 39312 ||| | | | ||||||||||| |||| Sbjct 72174 ATGTTAATAAGC---ACTCTAATTATGAAAT 72147 >seq117586 Length=260 Score = 168 bits (186), Expect = 2e-37 Identities = 183/240 (76%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 33499 TTTGAAGCGCTC-CAGGGCTATGAAATTAGCCTCAGGAACGATTCAGAAAACACAATGGA 33557 ||||||| || |||||| | |||| ||||||| | |||| || || | || | Sbjct 260 TTTGAAGGTGTCACAGGGCGAA-AAATAAGCCTCAAGGACGAATCGGATACAACTGTAAG 202 Query 33558 CGACGCAACAATTTTAGCGAACATTATTTTAAATTTCATCTTTGAAAATAACATTCCATT 33617 |||| || || |||| || || || ||| |||||||||||||| || | |||||||| Sbjct 201 TGACGTAAACATCCTAGCAAATATCATCTTAGATTTCATCTTTGAACATCATATTCCATT 142 Query 33618 TAGAAAAGGCTATGACATTTTGCCAGCAAATCAAGAGTATTACTTTTACAAATGTATCAC 33677 | | |||| ||||| ||||| ||||| |||||||| || || || ||||||||||| || Sbjct 141 CAAAGAAGGTTATGAGATTTTACCAGCGAATCAAGAATACTATTTCTACAAATGTATTAC 82 Query 33678 TAAACGAGTTTGTTGCATATGTGGAAAAACTGGTGCAGATATTGACCATTTCGATAAAGC 33737 ||| |||||||||| || ||||||| ||| || || || ||||| ||||| |||||||| Sbjct 81 CAAAAGAGTTTGTTGTATCTGTGGAAGAACAGGAGCTGACATTGATCATTTTGATAAAGC 22 >seq1820 Length=163924 Score = 104 bits (114), Expect = 6e-18 Identities = 167/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 39185 ATCCAGATGATGGATGTTGAAGCAGAACGTGATGCAATTTTAACAGCTTTGATGTCCTTA 39244 || || ||||| | ||||||||||| | ||||||| |||| ||||||||| || Sbjct 6431 ATGCAAATGATAGCGATTGAAGCAGAAAGGAATGCAATCTTAAATGCTTTGATGGTTTTG 6490 Query 39245 AGCATAATAAGTCGTCAAATTCTTCACTACAGTTTCTGTGTGCAGGACCATTACTCTAAT 39304 || ||| | ||| || ||| | || || | ||| | || || || ||| Sbjct 6491 AGTCTAACGAATCGAATGATCCTTTATTATTCTTATTTTGTTCCTGAAAGTTTTTCGAAT 6550 Query 39305 TATAAAATCGCAAGAGAAGTTGGCTATTCTGAAAGAAGTATTCAAAGAATGAAATCAGAA 39364 ||||| || ||| | || ||||| ||||||| ||||| |||| ||| ||||| Sbjct 6551 TATAAGATTAGTCTTGAAATCGGTTATTCCGAAAGAACGATTCAGAGAAAAAAAGCAGAA 6610 Query 39365 GCTTTGATTGAATTCGCAGAAGCTTACCGCAATGGCAAAATAATTGCATATAAATAATTT 39424 || |||||||||||||| ||||| || | ||| ||| | ||||| |||||||||||| Sbjct 6611 GCATTGATTGAATTCGCTGAAGCATATAAGACTGGAAAACTGATTGCGTATAAATAATTT 6670 >seq28223 Length=7146 Score = 89.7 bits (98), Expect = 1e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 33766 GACCATACAGAATACACTTACGCTGGTTTGTGTCGATGCCATCACACCGAAAAACATAAC 33825 || ||| |||||||||||||||| || | ||| || ||||||||| ||||||||| | Sbjct 31 GATCATTCAGAATACACTTACGCAGGACTTTGTAGAATCCATCACACGGAAAAACATCAA 90 Query 33826 ATTGGTATTACAGCATTTAAGAAAAAATATCATGTTAAAGGTATCAAATTGAACCAAGAA 33885 | ||| | || ||||| || || || || | ||||| || || || ||| ||||| Sbjct 91 CTAGGTGTAACTAATTTTAAAAATAAGTACCAAATCAAAGGGATTAAGTTAAACGAAGAA 150 Query 33886 ACTATCAAAAAATTACACATAGGAGGCTA 33914 || || || ||| | ||||||||| || Sbjct 151 ACAATTAAGAAACTTGGCATAGGAGGATA 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136648536713472