Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq32113 120 7e-22 seq16183 105 2e-17 seq1641 100 7e-16 seq48995 98.7 2e-15 >seq32113 Length=13445 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || ||||| || |||| |||||||||| || || | |||||| Sbjct 6439 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCT 6498 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||| ||||| || |||||||| ||||| || || || ||| ||||||||| || Sbjct 6499 TCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCT 6558 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| || || ||| | |||||||| || || || || || || || || Sbjct 6559 TGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCTAAAGTTATTGTT 6618 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||| ||||| ||||| Sbjct 6619 TTTCCAGTAAGTGTTTTGACAAATATTTG 6647 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| || | ||| || | || || || ||||| ||||||| ||||||||||| || || Sbjct 6885 TCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGT 6944 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||| |||||||| || || ||||| ||||| || || || || ||| || Sbjct 6945 GCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACC 7004 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| || ||||||||| ||| || ||| | |||||| | || || || |||| Sbjct 7005 CTCTTTATCTTGAATCTTTGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAG 7064 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || ||||| ||||| Sbjct 7065 AGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTG 7103 Score = 120 bits (132), Expect = 7e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| || | ||| || || || || || ||||||||||||| ||||||||||| || || Sbjct 7113 TCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGACAGGGT 7172 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||||| ||||| || || ||||| ||||||||||| || || || || Sbjct 7173 GCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCC 7232 Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 ||| || || || ||| || ||||| ||| | ||||| | | ||| || || | Sbjct 7233 CTCTTTGTCTTGGAT-TTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTA 7291 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || || || || || ||||| ||||| ||||| ||||| Sbjct 7292 AAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTG 7331 Score = 105 bits (116), Expect = 2e-17 Identities = 162/228 (71%), Gaps = 5/228 (2%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| || || ||||| | || ||||||| | ||| Sbjct 7570 CGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTG 7629 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| ||||||| |||||||| ||||| || | ||| || || || ||| ||| ||| Sbjct 7630 CGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCT 7689 Query 199529 TCTCGCTCCTGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || || ||||| ||| |||| || ||| | || || | | ||| || ||||| Sbjct 7690 TCCTTGTCTTGAAT-TTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAA 7748 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || |||||||| || ||||||||||| || || |||||| Sbjct 7749 AGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTG---CATTTT 7793 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || || || || |||||||| | || || |||| || || Sbjct 7342 CGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTA 7401 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||| || ||||| || || || || | ||| || || || ||| || Sbjct 7402 CGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGAATACCC 7461 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || |||||| |||||| ||||| ||||| | | |||||| || || Sbjct 7462 TCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCTACCTCTAAA 7521 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || ||||| || ||||| || || Sbjct 7522 GTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTG 7559 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| | ||| ||||| || || | |||||||||| | ||| | ||||| |||||||| Sbjct 6219 GTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCATCCTCCAGCTG 6278 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || ||||| |||||||| || || || || ||| || ||| || || ||||| Sbjct 6279 CTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTT 6338 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || ||| | ||||||| | ||| || || || || || || || || || Sbjct 6339 GGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTAATAGTTTTCCCTGT 6398 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || Sbjct 6399 CAGTGTCTTTACAAAGATCTG 6419 >seq16183 Length=3749 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| | ||| || ||||| |||| || ||||| | || || | ||||||||||| || Sbjct 876 GTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAGCGTGCGCCCATCTTCCAGTTG 935 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 |||||||||||| || || | || || || ||| ||| ||||| || || ||||| Sbjct 936 CTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGTATCTT 995 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 | ||| ||| ||||| || || | | ||| || ||||| ||||| || || || || Sbjct 996 TGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGT 1055 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | |||||| || || ||||| Sbjct 1056 TAAAGTTTTTACGAAGATTTG 1076 Score = 104 bits (114), Expect = 5e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| || ||||| || | |||||||||| || || | ||||||||| ||||||||||| Sbjct 198 AGTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTACGTCCATCTTCAAGCTGCTTTCC 257 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 || || || || | || ||||| ||| ||||||||| || ||||| || ||| Sbjct 258 AGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGAATTTTGGCCTT 317 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 || ||||| ||||| | | || || |||| ||||| ||||| || || || || Sbjct 318 AACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGT 377 Query 199612 TTTCACAAAAATTTG 199626 || ||||| ||||| Sbjct 378 CTTTACAAATATTTG 392 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || || | ||| || ||||| || | |||||||||| | || | ||||||| Sbjct 412 AGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCT 471 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || || || || | ||||| || || ||| || ||| ||| Sbjct 472 TCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCC 531 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || ||| || ||| | || || | | ||| || ||||| ||||| || Sbjct 532 TGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTT 591 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||| ||||| ||||| Sbjct 592 TTGCCAGTCAGTGTTTTTACAAATATTTG 620 Score = 95.1 bits (104), Expect = 3e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||| || ||||| ||||| || || | || || || || ||| |||||| Sbjct 10 CCATCTTCCAGTTGTTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGGGGAATGCCTTCT 69 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||||||||||| ||| || ||||| ||||| | | ||| || || || || Sbjct 70 TTGTCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGTA 129 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||||||||||||||| Sbjct 130 ATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTG 164 Score = 93.3 bits (102), Expect = 1e-13 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| | ||| || || || || | |||||| |||| | || | ||||||| Sbjct 640 AGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCT 699 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || || || || | ||||| || || |||||| ||| ||| Sbjct 700 TCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCC 759 Query 199538 TGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||| ||| || || || ||| | || || | | || || ||||| ||||| || Sbjct 760 TGAAT-TTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGT 818 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || | || || || |||||||| Sbjct 819 CTTGCCAGTCAATGTCTTTACGAAAATTTG 848 >seq1641 Length=3631 Score = 100 bits (110), Expect = 7e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| || ||||| || | || || |||||||| | ||||||||||| ||| || Sbjct 2378 CGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTA 2319 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| || || || || || ||||| | ||| |||||||| || ||| ||| Sbjct 2318 CGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCT 2259 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || || || || ||| || || || ||| | || || | | || || || | Sbjct 2258 TCCTTATCTTGGAT-TTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCGACCTCGAG 2200 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || |||||||| || || || || |||||||| Sbjct 2199 GGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTG 2161 >seq48995 Length=1108 Score = 98.7 bits (108), Expect = 2e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| || ||||| || | ||||||||| | ||| || | |||||||| || || ||||| Sbjct 417 AGTAGATTCCTTCTGAATGTTGTAGTCTGACAATGTGCGCCCATCTTCAAGTTGTTTTCC 358 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 ||||| ||||| | ||| ||||| || ||| || || || ||||| |||||||| Sbjct 357 AGCGAAAATGAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTTGAAT-TTTTGCTT 299 Query 199552 CA-CGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAG 199610 | | ||| | ||||| | | || || || | || || || ||||| || |||| Sbjct 298 TAACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTACCAGTAAGAG 239 Query 199611 TTTTCACAAAAATTTG 199626 |||| ||||||||||| Sbjct 238 TTTTTACAAAAATTTG 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176503541905628