Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq20 170 2e-37 seq41575 143 3e-29 seq16183 109 6e-19 seq32113 95.1 1e-14 >seq20 Length=148542 Score = 170 bits (188), Expect = 2e-37 Identities = 318/459 (69%), Gaps = 16/459 (3%) Strand=Plus/Minus Query 137246 CAAGAACGGTTACGCCGGCCAACATTTATACTCAACGTTCCTCAATACTGCTAGTTTCTA 137305 ||| ||||||||||||| ||| |||| || || ||||| ||||| || || ||||| Sbjct 86935 CAAAAACGGTTACGCCGTTCAATATTTGTATTCGACGTTTCTCAACACCGCCTCCTTCTA 86876 Query 137306 CGCGAGCGTGCAATGCTTTAACGGTATCAACGAAATCATACCACCACGCTCTT-CGACAC 137364 || | |||||| || || ||||| ||||||||||| | || || ||| | || || Sbjct 86875 TGCCAACGTGCAGTGTTTGAACGGCGTCAACGAAATCGTTCCGCCGCGCGCCAGCGTCA- 86817 Query 137365 AACGATACTTTGGCAGGCAATTGGACAACATCAAAGTGTGGAACACGCGTCATCCCAACA 137424 | || |||| ||| ||| ||| |||| | | |||| |||||| || ||||||| Sbjct 86816 ACCGCTACTACGGCCGGCGGGTGGGCAACGTGCGCGCCTGGACCACGCGACACCCCAACA 86757 Query 137425 TTTCACAGCTATCGACACAAATCTCGAGAGTTTTAGCACCACGCAAAACAGACGTCTACA 137484 | ||||| || || | ||| || || || | ||| ||| | ||| Sbjct 86756 TCAGCCAGCTGAGCACGCAGGTGTCGGACGT----GCGCCTC----AAC-GACTCCAACA 86706 Query 137485 ---ATTGGAACATCAAAGTGGGATTGGGGACGTTTGTCGGTGCGAATCGTGACTGTGATG 137541 |||||||| |||||||||| ||||| | ||| || || || || || |||| Sbjct 86705 CCGATTGGAACGTCAAAGTGGGCTTGGGCATATTTCCGGGCGCCAACACCGATTGCGATG 86646 Query 137542 GCGACAAAGAAGTAATCACTTACTTACCATACCCCAACTCGCTGATTGACCTTGAGTCTT 137601 |||||||| || | ||||| | | || | |||||| || || ||||| |||| || Sbjct 86645 GCGACAAAAAAATCATCACCTTTCTGCCGCAACCCAACAGTCTCATCGACCTGGAGTGTT 86586 Query 137602 TATTATACTGTGATCCCGTGTTTAGTTTCATATGTTTTGACAA-AAACAAATTAGCGTTC 137660 |||| ||| | || || ||||| ||||||||| || ||||| || | | | ||| ||| Sbjct 86585 TATTGTACGGCGACCCGCGGTTTAATTTCATATGCTTCGACAAGAATCGACTCAGC-TTC 86527 Query 137661 GTGTCACAGCAAATATACTATTTACACAAAAACATTAAC 137699 ||||| || ||||| |||||| | |||||||||| || Sbjct 86526 GTGTCCCAACAAATTTACTATCTGTTCAAAAACATTGAC 86488 Score = 141 bits (156), Expect = 1e-28 Identities = 270/397 (68%), Gaps = 23/397 (6%) Strand=Plus/Minus Query 146441 CCATTGCGCACACAATGCAATCCCTCGGGCAAACGATTACCCATAAATGATTGATTTATA 146500 || ||||||| || ||||| | || | || ||||| |||| ||| || ||||| | Sbjct 99217 CCGTTGCGCATCCATTGCAAACTTTCCGCCATGCGATTGCCCACAAACGACTGATTCTTG 99158 Query 146501 CTCCACTGGTCTAGTCGTGTGCCTTCTAATTTTTCGTAACCCGTAATACTACGACCGATA 146560 |||||||||| | || ||||| || | |||||||| ||||| | | ||| Sbjct 99157 GTCCACTGGTCGAAACGCGTGCCCTCCACTTTTTCGTGGCCCGTGTGGTTGCTCTTGATG 99098 Query 146561 AACTCTTTGTAAATATTGTCTGGAGTGTTGTTAAAAAACATGTATGGTATTAGAAACATG 146620 ||||||||| | || ||||| |||||||||||||| |||||||| ||||| ||| ||| Sbjct 99097 AACTCTTTGAATATGTTGTCGGGAGTGTTGTTAAACAACATGTACGGTATGTTAAATATG 99038 Query 146621 GGGTATTCGCGAC-CGTT-GACGCGGCACAATTT-----------------TGTGGGC-- 146659 || || |||| | |||| | ||||| ||||| || || Sbjct 99037 GGATA-GCGCGGCGCGTTCGGGTCGGCAAAATTTCCACCGCGCACCACGTACTTGCGCTC 98979 Query 146660 -ATACCGTCAAAATTTGATTGTCGAGACAGAAACGAAATTGGTGACAAACAAATTTGAGC 146718 || ||||||| || || || || ||||||||||| | || |||| || ||||| || Sbjct 98978 AATGTCGTCAAAGTTGGACTGGCGCGACAGAAACGAGACGGGCGACAGGCAGATTTGTGC 98919 Query 146719 GTGCACACCGTCGCTCGACTTCCACATTGACAAATCTTCAGACTCATTCAATACACCCTT 146778 |||| ||||| || | ||||| | || |||||| || || || || ||||| Sbjct 98918 GTGCGTGCCGTCTTCCGCCATCCACTCGGTCAGATCTTCGCTCTTGTTGAACACCCCCTT 98859 Query 146779 TTGTCCGTGAATACCACAAATCTTTAGACCCTCCAAA 146815 ||| ||||| || || ||||| || | ||||| ||| Sbjct 98858 TTGGCCGTGGATGCCGCAAATTTTGACGCCCTCTAAA 98822 Score = 127 bits (140), Expect = 2e-24 Identities = 214/307 (70%), Gaps = 2/307 (1%) Strand=Plus/Plus Query 166 TACATGGTGACTGAAGATCCCTTCAGAGGCCCTGGTAAGAATGTTAAGATTACCCTGTTT 225 || || ||| | ||||| ||||||| || || || || || ||| | || |||| Sbjct 136662 TATATCGTGGCCGAAGACCCCTTCACCGGGCCCGGCAAAAACCAAAAGCTAACTTTGTTC 136721 Query 226 AAGGAGATTCGTCGGATCCAGCCAGATACCATGAAGCTTGTGTGTAACTGGAGCGGCAAA 285 || |||||||| | |||| || || |||||||| ||| ||||||||||||||| Sbjct 136722 AAAGAGATTCGCAATGTGAAGCCGGACACGATGAAGCTGGTGCTCAACTGGAGCGGCAAA 136781 Query 286 GAGTTTTTGCGCGAAACCTGGACTCGTTTCATCTCAGAAGAG-TTCCCCATCACCACCGA 344 ||||||||||| ||||| ||||| |||||| || || | || || ||||| || ||| Sbjct 136782 GAGTTTTTGCGTGAAACTTGGACCCGTTTCGTC-GAGGACAGTTTTCCCATTGTCAACGA 136840 Query 345 TCAGGAAATTATGGATCTGTGGTTTGAGCTGCAACTTCGGCCCATGCAGCCCAACAGGTG 404 ||||| | ||||| ||| | | | | | || | |||| | ||||||| | || Sbjct 136841 CCAGGAGGTGATGGACGTGTTTCTCGTGATCAACCTGAGACCCACTCGGCCCAACCGTTG 136900 Query 405 CTACAAGTTCACGATGCAATACGCCCTGGCTGCGAACCCCGACTACGTCGCTCACGATGT 464 |||||||| | ||| |||| || | | || |||| ||||| | ||||| || Sbjct 136901 TTACAAGTTTTTGGCTCAACACGCGCTCCGTTGGGACGCCGAGTACGTGCCGCACGAAGT 136960 Query 465 GATTCGC 471 ||||||| Sbjct 136961 GATTCGC 136967 Score = 98.7 bits (108), Expect = 1e-15 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 76160 TGGGAGCGTGGCTACGAAGATTTTTACACTTTAGGACAACAGTTGAGCATCCGTATGACC 76219 |||||||| |||||||| || |||||| | || |||||||||||||| || || ||| Sbjct 101859 TGGGAGCGAGGCTACGAGGACAATTACACGCTCGGCCAACAGTTGAGCATTCGCATCACC 101918 Query 76220 ACTAACTTGATACAGAGCGGTCTCGATTTTAAACATCAA 76258 || || ||||||||||||| | ||||||||||||||| Sbjct 101919 ACCAAACTGATACAGAGCGGGTTGGATTTTAAACATCAA 101957 Score = 96.9 bits (106), Expect = 4e-15 Identities = 120/164 (73%), Gaps = 3/164 (2%) Strand=Plus/Plus Query 115639 TTTGAATTTCATCCTGGCAGTCAGCCGCGAACGTTTCAAACCATGAACAACGCCGACAGT 115698 |||||||| || || ||||| |||||| ||||||||||||| || ||| | ||| | Sbjct 69394 TTTGAATTCCACCCCGGCAGCCAGCCGAGAACGTTTCAAACGGTGCACA---CGGACGGC 69450 Query 115699 ACCGTGGTAAAAGTTTTGTTGTTATGTGACAATTGTTGCAAGCGCGAGTTGACAGACTAC 115758 || | | || || || |||| || ||| | |||||||||| |||||| || ||| Sbjct 69451 GCCACGATCAAGGTGATGGTGTTGTGCGACGAGTGTTGCAAGCAAGAGTTGCGCGAATAC 69510 Query 115759 GTGGAGGGCGAGAACAGTTTTAACATAGCATTTCAAAATTGCGA 115802 ||| ||||||||||| || || | || ||| | |||||||| Sbjct 69511 GTGAAGGGCGAGAACGCGTTCAATGTGGCGTTTAAGAATTGCGA 69554 >seq41575 Length=3752 Score = 143 bits (158), Expect = 3e-29 Identities = 632/990 (64%), Gaps = 33/990 (3%) Strand=Plus/Plus Query 98734 AAAGTTACGGGGGCTTATTTTGTAGAATGGGGTGTTTACGATCGCAAATTTCCAGCAGAT 98793 |||||| ||| || || || |||||||||||||| || | | ||||| || | ||| Sbjct 1070 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGAT 1129 Query 98794 AAAGTGCCTATCCCCAATTTGACACACCTTTTGTATGGTTTTATCCCCATTTGCGGAGGC 98853 | ||||| || ||| | || || | | || || ||||| || |||||||| || Sbjct 1130 CGTATACCTATACCTAATCTTACTCATTTACTCTACGGCTTTATTCCAATTTGCGGCGGT 1189 Query 98854 GACGGTATAAACGACAGTCTAAAACAAGTGCCGGGATCTTTTGAGACGTTACAAAAATCG 98913 ||||| || || || ||| ||||| | | || ||| | | |||| || Sbjct 1190 GACGGCATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCC 1249 Query 98914 TGCGATAAGAGAGATGATTTCAAGGTGAGCATCCACGATATTTACGGTGCTCTACAGAAA 98973 || | || || ||||| || ||||||||| | | || |||| ||| Sbjct 1250 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 1309 Query 98974 CCACAACAGGG--TGTCTCCGATTATAACGAGCCTTACCGTGGCAATTTCGGACAGCTTA 99031 |||||| | || ||||| | | |||||||| ||| ||||| || || || | | Sbjct 1310 CCACAAAAAGGATTGTCTTCA--TGGAACGAGCCCTACAAAGGCAACTTTGGTCAATTAA 1367 Query 99032 TGGCCATACGTAAACA---CAACCCACATCTAAAAATCCTACCCAGTATCGGTGGTTGGA 99088 || | || ||||| | ||| | | || || || ||| ||| ||||| |||| Sbjct 1368 TGTCACTA---AAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGA 1424 Query 99089 CTCTTAGCGACCCCTTCTATTTTTTCGCCGATGATTACAAGCGCAAAGTGTTCGTAGACT 99148 | ||| ||| || |||| ||||| | || | | ||| | | | || || | | Sbjct 1425 CGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAGT 1484 Query 99149 CGGTTCGTGAATTCCTACAGGTGTGGAAATTTTTCGACGGTGTAGACATCGACTGGGAGT 99208 | || || || || | |||||||| ||||| ||||| || ||||| ||||||| Sbjct 1485 CAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGT 1544 Query 99209 TTCCTGGCGGAAAGGGGGCCAACCCTGAAGTAGGAAATCCTAATGAGGACGGAAACACTT 99268 | ||||| || || || || |||||||| | || | || || || || | || Sbjct 1545 TCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGGTAGCCCA---GAAGATGGTGATTGTT 1601 Query 99269 ATGTCACACTTCTGCAAGAGCTTCGTTTGATGCTTGACGAATTGGGTGTG-GCCAATAAA 99327 |||| | | || |||| | ||| |||||| || || | | | || || || Sbjct 1602 ATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGA----GCTCTCAGCTAAGAAT 1657 Query 99328 CGTGTT---TACGAACTGACAAGTGCCGTGGGCGCCGGTTACGATAAAATCGACGTGGTC 99384 || |||||| | || ||| | |||| || | ||||||||| | || || Sbjct 1658 GGTAAGAAATACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTT 1717 Query 99385 GATTACTCTACAGCCAG--TCAATATT---TGGACCATGTGTTTTTAATGAGTTACGATT 99439 || ||| || || |||| ||| |||| ||| | || || ||||||||||| | Sbjct 1718 GA-----CTATGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACT 1772 Query 99440 TTAAAGGCGCCTGGTCCAACACCGACT-TGGGTCATCAAACACCATTGTATGCACCATCG 99498 | || || |||||||| || ||| | || |||||||| |||||||| || || || Sbjct 1773 TCAAGGGAGCCTGGTCAAATGAT-ACTCTAGGACATCAAACGCCATTGTACGCTCCTGCG 1831 Query 99499 TGGAACTCCGAAGAGAGATACACAACCGATTATGCGGTTAAACAGCTATTAAAGAAAAAA 99558 ||||| || | || | |||||| | || | | || ||| | | | | | | Sbjct 1832 TGGAATCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGCTGGCGCAGGGA 1891 Query 99559 GTGCCTTCTCACAAGATTGTAGTGGGAGTCGCCATGTACGGCAGAGGATGGAGTGGAGTG 99618 ||| | || | ||||||||||| || || || ||||| || | || |||| ||| || Sbjct 1892 GTGAATCCTAAGAAGATTGTAGTAGGTGTTGCTATGTATGGTCGTGGCTGGACTGGCGTT 1951 Query 99619 CATGACTACAAAAATAATAACGTTTTTACGGGTGTGGCCACGGGACCGGTAAAAGGCACC 99678 ||||| ||| || | || | || || || || || ||||| || ||||| || Sbjct 1952 CATGATTACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACT 2011 Query 99679 TGGGAAAACGGTGTTGTTGATTATAGGCAG 99708 ||| || | || || ||||| || ||| || Sbjct 2012 TGGCAAGATGGAGTGGTTGACTACAGGGAG 2041 >seq16183 Length=3749 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | || | ||||||||||| ||| ||||| || ||||||||||| ||| Sbjct 397 CCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 456 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || |||||||| || || || || | | ||||| || | || Sbjct 457 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 516 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| || ||| || ||| ||| | | | | || || | |||||| Sbjct 517 ATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 576 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||| ||||| |||||||| ||||| ||||| ||||| ||||||||| Sbjct 577 TCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 624 Score = 104 bits (114), Expect = 3e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || | || ||||||||| | ||||| ||| ||||| |||||||| ||||| || Sbjct 853 CCACCCCGTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAC 912 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || |||||| | || || || ||||| |||||||| |||| | || || || | || Sbjct 913 AGCGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 972 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||| ||||| ||| | | | | || || | |||||| Sbjct 973 ATGCCTTCCTTGTCTTGTATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 1032 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||||||||| || || | ||||| || ||||||||||| Sbjct 1033 TCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 1079 >seq32113 Length=13445 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| |||||| || |||| ||||| || ||| || || ||||||||||| || Sbjct 6196 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 6255 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || ||||||||||| ||||| || | || || || || | || Sbjct 6256 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 6315 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| |||||| || | | | | ||||| | ||| || Sbjct 6316 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 6375 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || ||||| || ||||| || || |||||||| ||||| Sbjct 6376 TCTAATGTAATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 6422 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||||| || ||||| | ||| |||||||||||| |||||||| || Sbjct 7108 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 7167 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || | ||||| || || || || | |||||||| || | || Sbjct 7168 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 7227 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| ||||| ||| || || | | | | ||||| | ||| || Sbjct 7228 ATGCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 7287 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || ||||| || || || |||||||||||||||||||| Sbjct 7288 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 7334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564107329699680