Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq20 253 1e-62
seq41575 233 1e-56
seq32113 113 3e-20
seq16183 100 2e-16
>seq20
Length=148542
Score = 253 bits (280), Expect = 1e-62
Identities = 439/634 (69%), Gaps = 3/634 (0%)
Strand=Plus/Minus
Query 88475 AATGTGTTTTTGaaaaaattaaaaaTCAACAAATTCACGGACAACATTGATTATTTGATT 88534
|||||||| ||||| ||| | |||| |||||| ||||| |||| |||||| ||||||||
Sbjct 87144 AATGTGTTCTTGAAGAAACTCAAAACCAACAAGTTCACCGACACCATTGACTATTTGATC 87085
Query 88535 TTGCCAAATTTTACGCTGTGGGATCACAATTTTTTAGTGTTTTTAAATAAAAAGTTCAAC 88594
|||||| | |||| ||||||| ||||||||| | | ||| | || ||| |||||||
Sbjct 87084 TTGCCACACTTTATATTGTGGGACCACAATTTTGTCATTTTTCTCAACAAAGCGTTCAAC 87025
Query 88595 AGCaaaaaaaTTGGCAGTTTGGTAAATGTGTGGGGTGCCATGCAAAAAATTTCGCTCACA 88654
|||| | ||| ||||| | | | | | ||| ||||||||||| ||||||
Sbjct 87024 TCCAAACACGACAACAGCTTGGTGGACATTTCGAGCGCCCTGCAAAAAATTAAACTCACA 86965
Query 88655 CAAGGCGTTATTAAAGATTTGATTCAAAACAAAAATGGATACGCCGGCCAATATTTATAC 88714
|| ||| | || ||||| | || | |||||| || ||||||| |||||||| ||
Sbjct 86964 CACGGCATCATCAAAGACCAATTGCAGAGCAAAAACGGTTACGCCGTTCAATATTTGTAT 86905
Query 88715 TCGACATTTTTAAACACTAGCAGTTTCTATGCCAACGTTCAATGTTTTAATGGTGTCAAC 88774
||||| ||| | ||||| | |||||||||||||| || ||||| || || ||||||
Sbjct 86904 TCGACGTTTCTCAACACCGCCTCCTTCTATGCCAACGTGCAGTGTTTGAACGGCGTCAAC 86845
Query 88775 GAAATTATTCCGCCCAAAATAAGCATTGAACGTTATTACGGTCGTCGCGTCGATAACATA 88834
||||| ||||||| ||| | | || || ||||| || || || | ||| |
Sbjct 86844 GAAATCGTTCCGCCGCGCGCCAGCGTCAACCGCTACTACGGCCGGCGGGTGGGCAACGTG 86785
Query 88835 CGAGTTTGGAACACGCGTCACCCGAACATATCGCAATTGTCCACTCAGTTTTC-TACG-G 88892
|| | |||| |||||| ||||| ||||| || || ||| ||| | || ||| |
Sbjct 86784 CGCGCCTGGACCACGCGACACCCCAACATCAGCCAGCTGAGCACGCAGGTGTCGGACGTG 86725
Query 88893 TGATTCAA-AATAAGAAAAACAATTGGAACGTAAAAGTCGGCCTTGGTACATTTGTGGGT 88951
| |||| | || | | |||||||||| ||||| ||| | || | |||| |||
Sbjct 86724 CGCCTCAACGACTCCAACACCGATTGGAACGTCAAAGTGGGCTTGGGCATATTTCCGGGC 86665
Query 88952 GCCAACAGAGATTGTGACGGCGACAAGGAGGTCATAACATTTTTACCCTATCCCAATTCG 89011
||||||| ||||| || |||||||| | |||| || ||| | || | |||||
Sbjct 86664 GCCAACACCGATTGCGATGGCGACAAAAAAATCATCACCTTTCTGCCGCAACCCAACAGT 86605
Query 89012 TTAATAGATCTGGAATCGTTGCTGTATTGCGATCCAAAATATTCGTTCTTGTGTTTTGAC 89071
| || || ||||| | || |||| |||| || | | ||| | || || |||
Sbjct 86604 CTCATCGACCTGGAGTGTTTATTGTACGGCGACCCGCGGTTTAATTTCATATGCTTCGAC 86545
Query 89072 AAAAATAAACTTTCATTTGTGTCGCAACAAATTT 89105
|| ||| ||| || ||||| ||||||||||
Sbjct 86544 AAGAATCGACTCAGCTTCGTGTCCCAACAAATTT 86511
Score = 136 bits (150), Expect = 3e-27
Identities = 279/409 (68%), Gaps = 33/409 (8%)
Strand=Plus/Minus
Query 98860 AGTTGGCAGCATTGCGAACACATTGCAATCCCTCCGCCAACCGATTACCCATAAACGATT 98919
|||||| | ||||| | |||||||| | ||||||| ||||| |||| |||||| |
Sbjct 99225 AGTTGGTGCCGTTGCGCATCCATTGCAAACTTTCCGCCATGCGATTGCCCACAAACGACT 99166
Query 98920 GATTAATACTCCACTGGTCCAATCGAGTTCCCTCCAATTTTTCAAAGCCCGTTATATTTT 98979
|||| | |||||||||| || || || ||||||| |||||| |||||| ||
Sbjct 99165 GATTCTTGGTCCACTGGTCGAAACGCGTGCCCTCCACTTTTTCGTGGCCCGTGTGGTTGC 99106
Query 98980 TGCCAATAAATTCTTTATAAATGTTGTCGGGAGTGTTGTTGAAAAATATGTACGGAAT-C 99038
| || || ||||| | |||||||||||||||||||| || || |||||||| ||
Sbjct 99105 TCTTGATGAACTCTTTGAATATGTTGTCGGGAGTGTTGTTAAACAACATGTACGGTATGT 99046
Query 99039 AATATAAGTGGATAGCGAACATTGTCTTTG---CGGCAAAATTT------TGCA-GGCAT 99088
| ||| | |||||||| | | || | ||||||||||| ||| | |
Sbjct 99045 TAAATATG-GGATAGCG--CGGCGCGTTCGGGTCGGCAAAATTTCCACCGCGCACCACGT 98989
Query 99089 ATTT-------AT------AAAATTAGTCTGACGCGACAAGTACGAAATGGGCGATAAAC 99135
| || || ||| || | ||| ||||||| |||| | |||||| | |
Sbjct 98988 ACTTGCGCTCAATGTCGTCAAAGTTGGACTGGCGCGACAGAAACGAGACGGGCGACAGGC 98929
Query 99136 ATATTTGAGCGTGTACCGTGGGATCGTCTTCCGCCACAAACTCGCTTAAATCTTCTGGTT 99195
| ||||| ||||| |||| |||||||||||| ||||| | | |||||| |
Sbjct 98928 AGATTTGTGCGTG---CGTG---CCGTCTTCCGCCATCCACTCGGTCAGATCTTCGCTCT 98875
Query 99196 CGTTTAAAACACCCTTTTGTCCGTGCACACCGCAAATTTTCAAACCCTC 99244
||| || || |||||||| ||||| | ||||||||||| | |||||
Sbjct 98874 TGTTGAACACCCCCTTTTGGCCGTGGATGCCGCAAATTTTGACGCCCTC 98826
Score = 105 bits (116), Expect = 5e-18
Identities = 160/225 (71%), Gaps = 12/225 (5%)
Strand=Plus/Minus
Query 100946 CACAATGTAATCTTTAGCGTAAACGTCGCGCACATACAAAATATCGTCCACTTTGTCGTA 101005
||| | |||||| | ||||| ||||||||| || |||| | ||||||| ||||||||
Sbjct 96917 CACCACGTAATCGCTGGCGTACACGTCGCGCGCAAACAACACATCGTCCTGCTTGTCGTA 96858
Query 101006 CACCAGCTGGATCGCTCTGTTTACGGTTTTTTCGTCATCGTAATTTCCATACAAAAACAT 101065
|||||| ||||| || | || | | || || | ||| || || |||||||||||
Sbjct 96857 CACCAGTTGGATGGCACGATTGATGTGCTTCTCCTGGTCGACGTTGCCGTACAAAAACAT 96798
Query 101066 TC-TTTTCAtttttttGTCGCGCGCATATTGTTTGTCaaaaaaaTTGTGCATAAGCACAT 101124
| || || | |||| || ||| ||||||| ||||||||||| | | |
Sbjct 96797 ACGCTTGCAATGTTTT-------GCGTATAGTTTGTCGTAAAAATTGTGCGCCAAAATGT 96745
Query 101125 TGTTGTTCATCATGATGTTGGGAAA--TGAAAAATGGCGACCGTC 101167
|||||||||| | ||||||||||| ||| ||| ||||||||
Sbjct 96744 TGTTGTTCATGAGAATGTTGGGAAAGCTGAGAAA--CCGACCGTC 96702
Score = 91.5 bits (100), Expect = 1e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 48517 TGGGAACGTAGCTACGAAGACAATTATACACTTGGTCAACAATTGAGCATTCGAATGACC 48576
||||| || ||||||| |||||||| || || || ||||| ||||||||||| || |||
Sbjct 101859 TGGGAGCGAGGCTACGAGGACAATTACACGCTCGGCCAACAGTTGAGCATTCGCATCACC 101918
Query 48577 ACTAATCTAATACAAAGTGGTCTAGATTTTAAACATCA 48614
|| || || ||||| || || | ||||||||||||||
Sbjct 101919 ACCAAACTGATACAGAGCGGGTTGGATTTTAAACATCA 101956
Score = 87.8 bits (96), Expect = 1e-12
Identities = 442/698 (63%), Gaps = 21/698 (3%)
Strand=Plus/Plus
Query 61 AACCAACACTACAAGAGTTTGGGTGCTGTGTTGAAAGATGTCAAACATAAAAAG-----G 115
||| || ||||||| ||||||||||| | || || | | ||| | |||||| |
Sbjct 136557 AACAAATACTACAAAAGTTTGGGTGCCATCTTCAAGAACGCCAAGCGCAAAAAGCACCTG 136616
Query 116 ATCGTCTGCGCGAAGCCGAAATTGAACCCGTTTTAGACATCGCCGACCAATATATGGTCA 175
|||| || ||||| || ||| ||| || | |||| | ||||| ||
Sbjct 136617 ATCGA--GCACGAAGAGGAGGAGAAACA---TTTGGATGTGCTCGACAACTATATCGTGG 136671
Query 176 CCGAGGATCCGTTCCGTGGTCCCGGAAAGAATGTTAGGATTACCCTTTTCAAAGAATGTA 235
|||| || || ||| || ||||| || || | | | || | |||||||| |
Sbjct 136672 CCGAAGACCCCTTCACCGGGCCCGGCAAAAACCAAAAGCTAACTTTGTTCAAAGAGATTC 136731
Query 236 GACGCGTCGAACCCGACACATTGAAGCTGGTGTGCAACTGGAGCGGTAAAGAATTTCTTC 295
| || | || ||||| ||||||||||| |||||||||||| ||||| ||| | |
Sbjct 136732 GCAATGTGAAGCCGGACACGATGAAGCTGGTGCTCAACTGGAGCGGCAAAGAGTTTTTGC 136791
Query 296 GCGAAATGTGGACTCGTTTCATCTCAGAGGA---GTTCCCAATCACCACCGACCAACAAA 352
| |||| ||||| |||||| || ||||| || || || || |||||| |
Sbjct 136792 GTGAAACTTGGACCCGTTTCGTC---GAGGACAGTTTTCCCATTGTCAACGACCAGGAGG 136848
Query 353 TAATGGACTTGTGGTTCGAGATTCAATGT-AGACCAATGCAACCTAACCGTTGCTACAAG 411
| |||||| ||| ||| || |||| | ||||| | | || |||||||| ||||||
Sbjct 136849 TGATGGACGTGTTTCTCGTGA-TCAACCTGAGACCCACTCGGCCCAACCGTTGTTACAAG 136907
Query 412 TTTACTATGCAATACGCTTTAGGCGCTCACCCCGACTACGTTCCCCATGACGTTATTCGC 471
||| ||| |||| | | || |||| ||||| || || || || ||||||
Sbjct 136908 TTTTTGGCTCAACACGCGCTCCGTTGGGACGCCGAGTACGTGCCGCACGAAGTGATTCGC 136967
Query 472 GCCCAGGACCCTTACTACATTGGTCCCAACAATATTGAACGCATCAATCT---GAAAAAA 528
| || || ||| | || | |||||| | | |||| | | ||||
Sbjct 136968 ATCGTCGAACCCATGTACGTGGGCCAGAACAATGAGTACAGAATCAGTTTGGCGAAACGC 137027
Query 529 GGTTTCGCTTTCCCGCTTATGTGTCTTCAATCCGTGTACAATGACAACTTTGAAACTTTC 588
|| || || ||| | ||| | || || ||||| || |||||| | |||
Sbjct 137028 GGCGGCGGTTGCCCCATCATGAACATACACAGCGAGTACACCAACTCGTTTGAATCGTTC 137087
Query 589 TTTGAAGATGTACTATGGCCATATTTCCACAGACCACTCGTCTACATCGGTACCACCTCT 648
| | || | ||| | || ||| || |||| ||||| || ||| ||||
Sbjct 137088 GTCAACCGCGTCATCTGGGAGAACTTTTACAAGCCCATCGTGTACATTGGCACCGACTCT 137147
Query 649 AGCGAAACCGAAGAAATCTTACTCGAAGTATCTTTCTTGTTCAAGATCAAGGAATTCGCA 708
|||| || ||||| | ||||||| || || ||||||| | || || || |||
Sbjct 137148 GCCGAAGAGGAGGAAATTCTCATCGAAGTGTCGCTCGTGTTCAAAGTTAAAGAGTTTGCA 137207
Query 709 CCCGATGTACCATTGTACACAGGTCCCGCTTATTAAAC 746
|| || | || ||| ||| |||||||| ||||||||
Sbjct 137208 CCTGACGCGCCTCTGTTCACCGGTCCCGCATATTAAAC 137245
>seq41575
Length=3752
Score = 233 bits (258), Expect = 1e-56
Identities = 849/1306 (65%), Gaps = 46/1306 (4%)
Strand=Plus/Minus
Query 5817 TTGCCCAAACCGGTGTTCATTGCATTTAAAAGATCACCGTTGTCCGCGTCTATTTCCCAC 5876
|| || | ||| ||||||| ||||| | || |||||||| || ||||| | ||||||
Sbjct 2271 TTACCGAGACCCATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAA 2212
Query 5877 GCAAATAAACCACCCAAATTTTTGCTCACTACATACTTACCTTTTGCTACCACCGATTGA 5936
||||| | |||||| | || || | |||||| ||||| ||| | | || ||| |
Sbjct 2211 GCAAAGAGACCACCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACGGATCTA 2152
Query 5937 TCGTTGTCGTACGTAACTAAATCATTATTA-----TC-GTAGACGTACGGAGATTGTGCA 5990
| || || || || || | ||| | || || | ||||||| || | ||| ||
Sbjct 2151 GCATTATCATAGGTTACGAGATCTCCAGTAGATGGTCTGAAGACGTAAGGGGCTTGGGCG 2092
Query 5991 ATGTTATCATA---GAATTGTACACTTTCGTCGTACCTATTTA-----CAATATCTTTAT 6042
| || || || ||| | ||||| | | | | | |||| |||| || | |
Sbjct 2091 ACATTGTCGTAATGGAACTCC-CACTTGCCTTG-AGCAATTTCATTCGCAATCTCCCTGT 2034
Query 6043 AATCGATTACGCCGCTTTCCCATGTACCTTTAACGGGAGCGCTAGCTATTCCTGTAAACG 6102
| || | || || || ||| || ||||| || || | |||| | ||||| || |
Sbjct 2033 AGTCAACCACTCCATCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGG 1974
Query 6103 GATTATTGTTTTCG-ACTCGATGCACACCGCTCCAGCCGCGTCCATACATAGCCACACCT 6161
|| | |||| |||| | || ||| || || ||||||| || ||||||||||| ||||||
Sbjct 1973 GAATGTTGTCTTCGTAATC-ATGAACGCCAGTCCAGCCACGACCATACATAGCAACACCT 1915
Query 6162 ACTACTAATTTAGTCGAATCGACATTTTGATTTAACAA-TCTGTTAATAGCAAAATGGGT 6220
||||| | || | | || || || | ||| | | ||| | | || | |
Sbjct 1914 ACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTC-CGAAGTCAGA 1856
Query 6221 TGTGTAATTTTCGTTAACGTCCCACGAAGGAGCGTAAAGCGGTGTTTGAAAACCCAAATT 6280
||||||| |||| || | ||||| ||||||||| | || |||||| || | | |
Sbjct 1855 TGTGTAAGTTTCCTTGGGATTCCACGCAGGAGCGTACAATGGCGTTTGATGTCCTAGAGT 1796
Query 6281 TTCCATGGACCAAGCGCCTTTAAAATCGTAGGTCATTACAAATATATAATCGAGATAGCG 6340
|| | ||||| || || || || ||||| |||| | || |||| ||| | |||
Sbjct 1795 ATCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATT 1736
Query 6341 TTGCGCGTCTGTATAATCGACAACGTCGATTTTGTCGTAACCGGCACCGATAGCGCTAGT 6400
||| || | ||| || ||||| | |||||| || | || || | ||||| |||
Sbjct 1735 TTGAGCCTTGCCATAGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGT 1676
Query 6401 TAGTTGCAATCGTTTACCTCTCtttttttCCAATTTGTTGAGCATTTCGCGTAACTCCTT 6460
|| || || ||||| |||| | | | | |||||| || ||||| || ||
Sbjct 1675 TAATTCGTATTTCTTACCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTT 1616
Query 6461 TAAAAGTATTGTATATGTTTTGCGATCCACTGAAGCGTTGCCCAGCGACGGGTTGGCACC 6520
| | || ||| | | ||| ||| | | || || ||||| |||||
Sbjct 1615 CATCAAACTTACATAACAATCACCATCTTCTGG---GCTACCGAGGTCAGGGTTAGCACC 1559
Query 6521 TTTACCGCCCGGAAACTCCCAATCTATGTCGACGCCGTCGAAAAATTTCCACGTTTCCAA 6580
||| || || || ||||||||||| || || || || ||||| |||||||| ||| |
Sbjct 1558 TTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAG 1499
Query 6581 AAATTCGCGCACACTATCAACAAA-CGTATTTCGTTTTTCGAC--GTCGTTTAACTGGTA 6637
||| || || | ||||| ||| || | || || ||| ||| | |
Sbjct 1498 AAACTCCTTTACTGACTGCACAAATCGTGTTC---TCTTAGATTTGTCAACTAAAAAGAA 1442
Query 6638 AAACGGATCGCTAAGCGTCCATCCGCCTATCGATGGCAATATTGTTAAATCTGGATTGTG 6697
|| |||||| ||||||||| || || || || || | || | || || || | |
Sbjct 1441 GAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCAGG---GCG 1385
Query 6698 GCGCTTGATC----GCCATTAACTGTCCAAAGTTTCCTTTGTACGGTTCGTTGTAGGCCT 6753
| ||||| | | |||||| || |||||||| |||||||| || ||||| | |
Sbjct 1384 G-GCTTGTTTTAGTGACATTAATTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAA- 1327
Query 6754 CGACA--CCTTTTTGTGGTTTTTGAAGCGCTCCCCATATATCATGAATGGTTACTTTGAA 6811
|||| ||||||||||||||||| | ||| ||||| ||| || || | ||||||||
Sbjct 1326 -GACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAA 1268
Query 6812 ATCTTTTCGGCCGGCGCACGATTTTTGCAACGCCTC-AAACGAACTGGGTATTTGTTGTT 6870
|| | |||||| || || || | || | |||| || | || | || |
Sbjct 1267 GTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCG-ATCTCTT--T 1211
Query 6871 TAAGCGCATCGTTTACACCATCGCCGCCACAAATTGGTATAAACCCGTACAACAAATGTG 6930
||| | ||| || | || || ||||| |||||||| ||||| ||||| | ||||| |
Sbjct 1210 TAAACT-ATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGTAAATGAG 1152
Query 6931 TAAGATTAGGAATGGGAATTTTGTCGGCGGGATATTGTCTATCGTAAACACCCCATTCCA 6990
|||||||||| || || || || |||| ||| ||| || ||||||||||| |
Sbjct 1151 TAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTA 1092
Query 6991 CAAAGTAAGCGCCCACAACATTATCGGTAATTTTTTCGAACGGTACATTGTTTTCCGACC 7050
| ||||| || |||||||| || | | ||| | |||||| ||| ||||| |
Sbjct 1091 CGAAGTAGGCACCCACAACTTTTCCAGATGTTTGCTTGAACGGCTTATTTTTTTCTCCCA 1032
Query 7051 ACATATATTTTATAGGATTTAAATGCGAACCGTCTGTATCGGCCAC 7096
| |||||| | |||| |||||| || || |||||||||||
Sbjct 1031 ATGTATATTCCAGAGGAGGTAAATGACTTCCATCGGTATCGGCCAC 986
>seq32113
Length=13445
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||||| |||||| || | ||| ||||||||| |||||||| || |
Sbjct 7564 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAA 7623
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | |||| | || |||||||| || || | ||||| ||||| || ||||| | ||
Sbjct 7624 AGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 7683
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||| ||||| ||||| ||| | | | | || || | ||| ||
Sbjct 7684 ATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACT 7743
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||||||||| ||||||||||| | ||||| || |||||||||||
Sbjct 7744 TCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 7790
Score = 102 bits (112), Expect = 6e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||| ||||| ||||||||||| ||||||||| || ||||| || | |
Sbjct 5968 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 6027
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | ||| |||| ||||| ||||| || | || |||| |||||| || || | |||
Sbjct 6028 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCGAAGATTAGACGCTGTTGGTCTGGGGGA 6087
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTA--ATCGTCGCTACTGTGTCTGCGCTTTCCA 39670
| ||| || ||||| || || ||| || ||| || ||||| | ||||
Sbjct 6088 ATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATA--GTGTCGGATGGCTCCA 6145
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| || ||||| || || || || || | ||| || ||||||||||||||
Sbjct 6146 CCTCTAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 6194
Score = 98.7 bits (108), Expect = 7e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| ||||||| ||||||||| | ||| | || || ||||| || || || || | |
Sbjct 7108 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAC 7167
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| ||| |||| |||||||| || || |||| || | |||||||||||| | ||
Sbjct 7168 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 7227
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||| |||||||| ||||| ||| | | | | |||||| | ||| ||
Sbjct 7228 ATGCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 7287
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| |||||||||||||| || || | ||||| || ||||| |||||
Sbjct 7288 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 7334
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| ||||| ||||| | |||||| ||||||||| ||||| || ||||| || || |
Sbjct 6196 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 6255
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | || |||| |||| || || || | ||||| | ||| || ||||| | |||
Sbjct 6256 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 6315
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| || |||||||| || || ||||| | | | ||||||| | ||| ||
Sbjct 6316 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 6375
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| || ||||| ||||| || || | || ||||| |||||||||||
Sbjct 6376 TCTAATGTAATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 6422
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
||||| || | |||| ||| ||||| | || ||| ||||| ||||||||||| |
Sbjct 7336 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 7395
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| || |||| |||| |||||| || ||||||| | | ||| ||||| | |||
Sbjct 7396 AATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGA 7455
Query 39613 ACGCCTTCTTTGTC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670
| || |||||||| | || ||| | || ||| || ||||| | ||| |
Sbjct 7456 ATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATA--GTGTCGGACGGTTCTA 7513
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| || ||||| || ||||| || || | ||| || || |||||||||||
Sbjct 7514 CCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 7562
>seq16183
Length=3749
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||||| || || |||||||| ||| || || |||||||| || | |
Sbjct 853 CCACCCCGTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAC 912
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| ||| |||| |||| ||| || ||| | ||||| | | || ||||| | ||
Sbjct 913 AGCGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 972
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||| ||||| ||| ||| || | | | | ||| || | ||||||
Sbjct 973 ATGCCTTCCTTGTCTTGTATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 1032
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
||||| || || ||||| || |||||||||||||||||||| ||||||
Sbjct 1033 TCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATG 1080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346691873660372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |