Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq11297 152 6e-32 >seq11297 Length=12984 Score = 152 bits (168), Expect = 6e-32 Identities = 487/747 (65%), Gaps = 24/747 (3%) Strand=Plus/Minus Query 105907 AAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTC 105966 ||| ||||| | | | |||||| | || || || | || |||||||||| |||| Sbjct 12385 AAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTC 12326 Query 105967 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 106026 | | || || | |||||||| || ||||| || ||||| || || ||||| ||| || Sbjct 12325 AGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATT 12266 Query 106027 ACGAAGACCCTTTTCCTTG--ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTG 106084 || | ||| | || ||| || ||| || || ||| ||||||| | || | Sbjct 12265 GCGCAAACCATGTT--TTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAA---AGGTCT 12211 Query 106085 GTTTCACCTT---CCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCA 106141 || | || ||||||||||| | || || | |||||| | ||| || | | Sbjct 12210 GTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGA 12151 Query 106142 AATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGA 106201 |||| || | ||||| |||||| |||||||| || || || | | | | | Sbjct 12150 TATGTACTGTACGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAA 12091 Query 106202 TACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG 106261 || || |||||||| || | ||| | | |||| || || | | || Sbjct 12090 TAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGA-TAT 12032 Query 106262 CGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCG 106320 || ||| | ||| |||| || | || |||||||| | |||||||||||| |||| Sbjct 12031 TCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCT 11972 Query 106321 CATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377 |||||| || || || ||| || ||||||||||| ||||| ||| ||| Sbjct 11971 CATATTTGAAGTTTTTGCT---TCAGGGACAGGATAAAAATTAACATCAATAACTTTGTT 11915 Query 106378 TAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT 106437 || ||||| || ||||||||||||||||| | | ||||| | ||| ||| || | Sbjct 11914 TAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG---TT 11858 Query 106438 CTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 106497 | |||| ||| || | ||| || || || || | ||||| || ||| ||||| Sbjct 11857 ATTTTCA---ACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATC 11801 Query 106498 CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATT 106557 | ||||| | | || || || || | ||| || ||||| || || | ||| Sbjct 11800 TTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATT 11741 Query 106558 CTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 ||||| ||||||||| |||| || |||||||| || | |||||| || || || ||||| Sbjct 11740 TTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTC 11681 Query 106618 CGTCTGTGACTTGAGAATTGCCTTCCA 106644 | || | | | ||||| |||||| Sbjct 11680 CACTTGGGCTTCTATAATTGACTTCCA 11654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588800218920160