Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_015252.1 Length=36953 Score E Sequences producing significant alignments: (Bits) Value seq14088 140 8e-29 seq14859 125 2e-24 seq1539 100 7e-17 >seq14088 Length=28720 Score = 140 bits (154), Expect = 8e-29 Identities = 137/177 (77%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 24494 GAAGTGCTACCCTCCATTAGAAAACATGGTGCCTATCTGACAGATGAAAAAGCATACGAT 24553 ||||| ||||| || |||||||| | || || || || || ||| ||||||| || || Sbjct 2903 GAAGTTCTACCATCAATTAGAAAGAACGGCGCATACCTAACCGATCAAAAAGCGTATGAG 2844 Query 24554 ATTACTCACAATCCAAATTCACTAGCGGATATTTTACAACAAGCAAGCGAACAATTACGT 24613 ||||| |||||||||||||||||||| ||| | || ||||||| | |||||| || Sbjct 2843 ATTACACACAATCCAAATTCACTAGCAGATCTGTTGTTACAAGCAGGTGAACAACTAAAA 2784 Query 24614 CAAAAGGATTTAGTAATTGAAGAAATGAAGCCCAAAGCATTATTTGCCGATGCGGTA 24670 ||||| ||||| || || |||||||| | || ||||||||||| | ||||| ||| Sbjct 2783 CAAAAAGATTTGGTTATCCAAGAAATGCAACCTAAAGCATTATTCTCAGATGCAGTA 2727 >seq14859 Length=68005 Score = 125 bits (138), Expect = 2e-24 Identities = 276/409 (67%), Gaps = 10/409 (2%) Strand=Plus/Plus Query 13340 GCAGCCGCGGCGAAACTTGGTAACATACAAGGTGAATCGGGTCCACAAATGAACCCTGAC 13399 |||||||| | | | | || ||||| || || ||| || || ||||| |||||| Sbjct 43780 GCAGCCGCAGGTATATTGGGGAACATTCAGGGGGAAGTCGGAGCAAGCATGAATCCTGAC 43839 Query 13400 ACAGAACAAGTCGGAGGACCTGCATACGGACTTGTGCAATGGGATGGTTCAGCTTATCCA 13459 || ||||| || || || || || || |||||||| ||||||||||| || ||||||||| Sbjct 43840 ACCGAACAGGTGGGTGGGCCAGCCTATGGACTTGTTCAATGGGATGGATCTGCTTATCCA 43899 Query 13460 CTTGTTGGCCAACCAACGAATAATGGTCGTGAATACGTTCAAAGGCTGATGAAAGCTGCA 13519 | || || |||||| || || || || || ||||| | ||||||| | ||| Sbjct 43900 TTAGTAGGATCACCAACTTGGAACGGACGAGAGTATGTTCAGCGTTTGATGAATACCGCA 43959 Query 13520 AATATCACTGATGATTACAGAACAATTGTGCCGCAAGTTAATCTAATTGAATGGAGCATG 13579 ||| || ||||| || || | ||||||| || || | || ||| | ||| Sbjct 43960 GGGATCCAAGAAGATTATCAAAGTATCGAAGCGCAAGTAAAATTATTAGATTGGTGTATG 44019 Query 13580 AAAAACGGTCAGTGGATAGGCGCAGTAGAACCTAAAACAGTCAGCGGATTCAAGGC-ATC 13638 || ||||| ||||| || |||| | || | |||||| ||||| ||| | ||| Sbjct 44020 TTCAATGGTCAATGGATTGGGAAAGTAAATCCAACCACAGTCTCTGGATTTAAGACAATC 44079 Query 13639 AATATCACCAAGAACAGCAGCAAGAGCATTCCTTT---AT-AACTTTGAAAGACCCGCAA 13694 ||| ||||| | |||||| || | ||| || ||||| || | || || Sbjct 44080 AATGATGCCAAG-AGTGCAGCA----TATGCTTTTGAAATGAACTTCGAGCGTCCAGCTT 44134 Query 13695 CAGGTCATCCCGAGCGTGAAGATTATGCACAGGCTTGGTATGACAAGTT 13743 | | ||||| || || || ||||||| || |||||||| ||||| || Sbjct 44135 CTGCACATCCAGAACGGCAAAATTATGCGCAAGCTTGGTACGACAAATT 44183 Score = 89.7 bits (98), Expect = 1e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 32039 ATGATGAATCGAGTTGTTTTAGTGGGCCGTTTAACAAAGGACCCCGAATTGAAATATACA 32098 ||||| ||| ||||| |||||||| || ||||| |||||||| || | | | |||| Sbjct 19978 ATGATTAATAACGTTGTATTAGTGGGACGGTTAACTAAGGACCCAGACATAAGAAATACT 20037 Query 32099 CCTGCAGGAGCAGCAGTTGCCACATTTACACTAGCTGTAAATCGTACGTTTACGAATCAG 32158 | |||| | | | || | ||||||||||| || || |||| |||| | || Sbjct 20038 CAACAAGGAACGACGATCGCTAGTTTTACACTAGCGGTCAACCGTAACTTTAAAGACCAA 20097 Query 32159 CAAGGTGAGCGTGAAGCTGATTACATTAACTGTGTCGTTTGGCGTAAGGCTGCCGAA 32215 | || |||||||||| |||| ||||| ||||| | |||||||||| | || ||| Sbjct 20098 AATGGAAAGCGTGAAGCAGATTTTATTAATTGTGTTGCTTGGCGTAAGACAGCTGAA 20154 >seq1539 Length=57711 Score = 100 bits (110), Expect = 7e-17 Identities = 196/287 (68%), Gaps = 2/287 (1%) Strand=Plus/Minus Query 32037 AAATGATGAATCGAGTTGTTTTAGTGGGCCGTTTAACAAAGGACCCCGAATTGAAATATA 32096 ||||||| ||| || |||||| || || ||||| || || ||||| || |||| Sbjct 16175 AAATGATCAATAATGTAACTTTAGTAGGACGGTTAACCAAAGATCCCGATTTACGTTATA 16116 Query 32097 CACCTGCAGGAGCAGCAGTTGCCACATTTACACTAGCTGTAAATCGTACGTTTACGAATC 32156 | | || ||||||| ||||| ||||| |||| || ||||| | |||||||||| Sbjct 16115 CCGCAAGTGGCACAGCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATC 16056 Query 32157 AGCAAGGTGAGCGTGAAGCTGATTACATTAACTGTGTCGTTTGGCGTAAGGCTGCCGAAA 32216 | | || | || |||||||||| || || ||||| |||||||||| | || |||| Sbjct 16055 AAAACGGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAA 15996 Query 32217 GCGTAGCTA-ACTACTTGAAAAAAGGAAGTTTAGCAGGTGTTGATGGTCGATTACAAACA 32275 | |||| | || | ||||| || |||||| || || | || || | ||||| Sbjct 15995 CGATGGCTACATTAGCT-AAAAAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAACG 15937 Query 32276 CGTAACTATGAAGGCAATGACGGTAAGCGTGTATATGTGACAGAGGT 32322 || | ||||| | | | || ||||||| || ||||| || || Sbjct 15936 CGGACTTATGACAACCAGCAAGGACAGCGTGTCTACGTGACTGAAGT 15890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117903438967320