Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_015252.1
Length=36953
Score E
Sequences producing significant alignments: (Bits) Value
seq14088 140 8e-29
seq14859 125 2e-24
seq1539 100 7e-17
>seq14088
Length=28720
Score = 140 bits (154), Expect = 8e-29
Identities = 137/177 (77%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 24494 GAAGTGCTACCCTCCATTAGAAAACATGGTGCCTATCTGACAGATGAAAAAGCATACGAT 24553
||||| ||||| || |||||||| | || || || || || ||| ||||||| || ||
Sbjct 2903 GAAGTTCTACCATCAATTAGAAAGAACGGCGCATACCTAACCGATCAAAAAGCGTATGAG 2844
Query 24554 ATTACTCACAATCCAAATTCACTAGCGGATATTTTACAACAAGCAAGCGAACAATTACGT 24613
||||| |||||||||||||||||||| ||| | || ||||||| | |||||| ||
Sbjct 2843 ATTACACACAATCCAAATTCACTAGCAGATCTGTTGTTACAAGCAGGTGAACAACTAAAA 2784
Query 24614 CAAAAGGATTTAGTAATTGAAGAAATGAAGCCCAAAGCATTATTTGCCGATGCGGTA 24670
||||| ||||| || || |||||||| | || ||||||||||| | ||||| |||
Sbjct 2783 CAAAAAGATTTGGTTATCCAAGAAATGCAACCTAAAGCATTATTCTCAGATGCAGTA 2727
>seq14859
Length=68005
Score = 125 bits (138), Expect = 2e-24
Identities = 276/409 (67%), Gaps = 10/409 (2%)
Strand=Plus/Plus
Query 13340 GCAGCCGCGGCGAAACTTGGTAACATACAAGGTGAATCGGGTCCACAAATGAACCCTGAC 13399
|||||||| | | | | || ||||| || || ||| || || ||||| ||||||
Sbjct 43780 GCAGCCGCAGGTATATTGGGGAACATTCAGGGGGAAGTCGGAGCAAGCATGAATCCTGAC 43839
Query 13400 ACAGAACAAGTCGGAGGACCTGCATACGGACTTGTGCAATGGGATGGTTCAGCTTATCCA 13459
|| ||||| || || || || || || |||||||| ||||||||||| || |||||||||
Sbjct 43840 ACCGAACAGGTGGGTGGGCCAGCCTATGGACTTGTTCAATGGGATGGATCTGCTTATCCA 43899
Query 13460 CTTGTTGGCCAACCAACGAATAATGGTCGTGAATACGTTCAAAGGCTGATGAAAGCTGCA 13519
| || || |||||| || || || || || ||||| | ||||||| | |||
Sbjct 43900 TTAGTAGGATCACCAACTTGGAACGGACGAGAGTATGTTCAGCGTTTGATGAATACCGCA 43959
Query 13520 AATATCACTGATGATTACAGAACAATTGTGCCGCAAGTTAATCTAATTGAATGGAGCATG 13579
||| || ||||| || || | ||||||| || || | || ||| | |||
Sbjct 43960 GGGATCCAAGAAGATTATCAAAGTATCGAAGCGCAAGTAAAATTATTAGATTGGTGTATG 44019
Query 13580 AAAAACGGTCAGTGGATAGGCGCAGTAGAACCTAAAACAGTCAGCGGATTCAAGGC-ATC 13638
|| ||||| ||||| || |||| | || | |||||| ||||| ||| | |||
Sbjct 44020 TTCAATGGTCAATGGATTGGGAAAGTAAATCCAACCACAGTCTCTGGATTTAAGACAATC 44079
Query 13639 AATATCACCAAGAACAGCAGCAAGAGCATTCCTTT---AT-AACTTTGAAAGACCCGCAA 13694
||| ||||| | |||||| || | ||| || ||||| || | || ||
Sbjct 44080 AATGATGCCAAG-AGTGCAGCA----TATGCTTTTGAAATGAACTTCGAGCGTCCAGCTT 44134
Query 13695 CAGGTCATCCCGAGCGTGAAGATTATGCACAGGCTTGGTATGACAAGTT 13743
| | ||||| || || || ||||||| || |||||||| ||||| ||
Sbjct 44135 CTGCACATCCAGAACGGCAAAATTATGCGCAAGCTTGGTACGACAAATT 44183
Score = 89.7 bits (98), Expect = 1e-13
Identities = 126/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 32039 ATGATGAATCGAGTTGTTTTAGTGGGCCGTTTAACAAAGGACCCCGAATTGAAATATACA 32098
||||| ||| ||||| |||||||| || ||||| |||||||| || | | | ||||
Sbjct 19978 ATGATTAATAACGTTGTATTAGTGGGACGGTTAACTAAGGACCCAGACATAAGAAATACT 20037
Query 32099 CCTGCAGGAGCAGCAGTTGCCACATTTACACTAGCTGTAAATCGTACGTTTACGAATCAG 32158
| |||| | | | || | ||||||||||| || || |||| |||| | ||
Sbjct 20038 CAACAAGGAACGACGATCGCTAGTTTTACACTAGCGGTCAACCGTAACTTTAAAGACCAA 20097
Query 32159 CAAGGTGAGCGTGAAGCTGATTACATTAACTGTGTCGTTTGGCGTAAGGCTGCCGAA 32215
| || |||||||||| |||| ||||| ||||| | |||||||||| | || |||
Sbjct 20098 AATGGAAAGCGTGAAGCAGATTTTATTAATTGTGTTGCTTGGCGTAAGACAGCTGAA 20154
>seq1539
Length=57711
Score = 100 bits (110), Expect = 7e-17
Identities = 196/287 (68%), Gaps = 2/287 (1%)
Strand=Plus/Minus
Query 32037 AAATGATGAATCGAGTTGTTTTAGTGGGCCGTTTAACAAAGGACCCCGAATTGAAATATA 32096
||||||| ||| || |||||| || || ||||| || || ||||| || ||||
Sbjct 16175 AAATGATCAATAATGTAACTTTAGTAGGACGGTTAACCAAAGATCCCGATTTACGTTATA 16116
Query 32097 CACCTGCAGGAGCAGCAGTTGCCACATTTACACTAGCTGTAAATCGTACGTTTACGAATC 32156
| | || ||||||| ||||| ||||| |||| || ||||| | ||||||||||
Sbjct 16115 CCGCAAGTGGCACAGCAGTGGCCACTTTTACCTTAGCCGTTAATCGCAATTTTACGAATC 16056
Query 32157 AGCAAGGTGAGCGTGAAGCTGATTACATTAACTGTGTCGTTTGGCGTAAGGCTGCCGAAA 32216
| | || | || |||||||||| || || ||||| |||||||||| | || ||||
Sbjct 16055 AAAACGGCAATCGAGAAGCTGATTTTATCAATTGTGTGATTTGGCGTAAACCAGCGGAAA 15996
Query 32217 GCGTAGCTA-ACTACTTGAAAAAAGGAAGTTTAGCAGGTGTTGATGGTCGATTACAAACA 32275
| |||| | || | ||||| || |||||| || || | || || | |||||
Sbjct 15995 CGATGGCTACATTAGCT-AAAAAGGGTAGTTTAATCGGCGTCGTCGGACGGATTCAAACG 15937
Query 32276 CGTAACTATGAAGGCAATGACGGTAAGCGTGTATATGTGACAGAGGT 32322
|| | ||||| | | | || ||||||| || ||||| || ||
Sbjct 15936 CGGACTTATGACAACCAGCAAGGACAGCGTGTCTACGTGACTGAAGT 15890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117903438967320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |