Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_015254.1 Length=41518 Score E Sequences producing significant alignments: (Bits) Value seq28223 129 2e-25 seq2203 82.4 2e-11 >seq28223 Length=7146 Score = 129 bits (142), Expect = 2e-25 Identities = 290/431 (67%), Gaps = 10/431 (2%) Strand=Plus/Plus Query 33270 ATATTACTATTTGAAGTTGAAAGAAAGTTTTTTCGATTCAGACGAGATGAAAGTATTGGA 33329 ||| |||||||| || | ||||| | |||||| ||| ||||| |||| | | || Sbjct 204 ATACTACTATTTAAAACTAAAAGAGAATTTTTTTGATAGTGACGAAATGATTCTTCTTGA 263 Query 33330 AGCTATGCCAGACGGTCATAAGTACAGCAACATCTTGTTAAAGCTATATCTTAAAAGCCT 33389 | ||||||||| || ||| || ||||| | | || || ||| | ||| || Sbjct 264 AAGTATGCCAGATGGCTATATATATTCTAACATTCTCCTCAAACTCTATTTACGAAGTCT 323 Query 33390 TAAAAACGAAGGCAAGTTGATGCTTAACGACCATATCCCTTACAACACAGCGATGTTAGC 33449 || | ||||||||||||||| |||| ||| || || | || | | ||| | || Sbjct 324 GAAGCATGAAGGCAAGTTGATGTTTAATGACAGAATTCCATTTAATTCTACTATGCTCGC 383 Query 33450 GACTATCACCAATCATTCTGTTGGAGATGTTGAAAGAGCATTGAATATATTAGAAAGTTT 33509 |||||||| | |||||||| || | ||| |||| ||| | | || || ||| Sbjct 384 AACTATCACAAGGCATTCTGTAGGTGTTGTAGAAAAAGCGGTTCAAATTTTCTGTGATTT 443 Query 33510 ATCTCTAATTGAAGTTTTAGACAACGGATCAATTTACATGTTGGATATTCAAACGTTAAT 33569 || ||||| || ||||| |||||| |||| ||||||| |||||||||| || || Sbjct 444 GCAACTTATTGATGTATTAGATAACGGAGCAATCTACATGTCAGATATTCAAAGTTTTAT 503 Query 33570 CGGTAAATCTAGTTCAGAGGGTGACAGAAAAAAGGCTTATCGTATGAGAAT---TGAAGC 33626 || || || |||| | || ||||||| | |||| | | || ||| ||||| Sbjct 504 TGGGAAGTCCTCAACAGAAGCAGATAGAAAAAGAGATTATAGAAAGAAAATAGAAGAAGC 563 Query 33627 TGAAAAGACTGGCGCTAA-AGCATTGGGACAAACGTCCGGACAATTGT-CGGACATTCGT 33684 |||||| | ||| | || ||||||| || ||||||| ||| |||||| | Sbjct 564 AAAAAAGAAT----TTAATAACAGGAGGACAAATGT-CGGACAAATGTCCGGACAAAACT 618 Query 33685 ACACCAGAGTT 33695 ||||||||||| Sbjct 619 ACACCAGAGTT 629 >seq2203 Length=131112 Score = 82.4 bits (90), Expect = 2e-11 Identities = 75/92 (82%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 31 AATTAGCAGAAATAGATTA-CAACGATGGTATGAAATACAAAGACATTGCAGCAAAATAT 89 || ||||| | |||||||| ||| | || ||||| ||||||||||| || || ||||| Sbjct 493 AACTAGCATACATAGATTATCAAAGC-GGCATGAAGTACAAAGACATAGCCGCTAAATAC 551 Query 90 GATGTTTCGATTAATACAGTTAAGTCGTGGAA 121 ||||| || || |||||||||||||| ||||| Sbjct 552 GATGTATCTATCAATACAGTTAAGTCTTGGAA 583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132483669195840