Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq32113 156 9e-33 seq16183 154 3e-32 seq48995 141 2e-28 seq36723 86.0 1e-11 seq20 84.2 5e-11 >seq32113 Length=13445 Score = 156 bits (172), Expect = 9e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || |||||||| |||||||||||||| | | ||| | |||||||| | || Sbjct 6675 GTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTCCAATTG 6734 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || || || || ||||||||||| || ||||| || || ||||| ||||| Sbjct 6735 CTTTCCAGCAAAAATGAGGCGCTGTTGGTCTGGGGGGATGCCCTCCTTATCTTGTATTTT 6794 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| |||||||| ||||| || ||| ||||| ||||||| |||||||| || Sbjct 6795 AGCTTTGACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCCAGT 6854 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| ||||| || || | |||||| Sbjct 6855 CAATGTTTTGACAAATATTTGCAT 6878 Score = 154 bits (170), Expect = 3e-32 Identities = 157/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| ||||||||||| || |||||||| || | || || | |||||||| || || Sbjct 6447 GTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGTTG 6506 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| ||||||||||| |||||||| ||||||||||| ||||| || |||||||| || Sbjct 6507 CTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTT 6566 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || || ||||||||||| || || ||||| | || | || ||||| || Sbjct 6567 AGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCTAAAGTTATTGTTTTTCCAGT 6626 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 | ||||| || || | ||||||| Sbjct 6627 AAGTGTTTTGACAAATATTTGCATT 6651 Score = 150 bits (166), Expect = 4e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || ||||||||||| || ||||| || | || || | |||||||| |||||| Sbjct 6904 TGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCTAGCTGC 6963 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || |||||||| |||||||| ||||| ||||| || ||||| |||||||| ||| Sbjct 6964 TTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCTTTATCTTGAATCTTT 7023 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || ||||||||||| || ||||| || || || | ||||| ||||| Sbjct 7024 GCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGAGTTATAGTCTTGCCTGTT 7083 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || || || | |||||| Sbjct 7084 AGTGTCTTGACAAATATTTGCAT 7106 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||||||||| || |||||||||||||| || || | |||||| | || || Sbjct 7578 CAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTC 7637 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||||| || ||||| || | |||||||| ||||||||||||||||| ||||| Sbjct 7638 TTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 7697 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||||||| || || || ||||| || || ||| ||| ||||| | |||| || Sbjct 7698 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGT 7757 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || || | ||||| || || | ||||||| Sbjct 7758 TTTACCCGTAAGTGTTTTCACAAAGATCTGCATTT 7792 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || | ||| | |||||||||||| ||||||||||| || | ||||| | ||||| Sbjct 6211 AATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCATCC 6270 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || |||||||| || ||||| || || |||||||| ||||| ||||| || ||||||||| Sbjct 6271 TCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCT 6330 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || || || || || ||||| ||||| || ||| ||||| | |||| || Sbjct 6331 TGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTAATAGTT 6390 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||||| || ||||| || | ||||| Sbjct 6391 TTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 6422 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || ||||| ||||| || ||||| || | || || | |||||||| Sbjct 7126 ACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCC 7185 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||||| || |||||||| || || || || || || ||||| ||||||||||| Sbjct 7186 AATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGG 7245 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| || || || ||||| ||||| ||| ||| ||||| | |||| || ||| Sbjct 7246 ATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTTTTT 7305 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || || | |||||| Sbjct 7306 CCAGTGAGTGTTTTAACAAAGATTTGCAT 7334 Score = 114 bits (126), Expect = 3e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| || |||||||| || || || || | ||||| | ||||| || | ||| ||||| Sbjct 5997 AGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCCAACTGTTTACC 6056 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 |||||||| || || ||||||||||| |||||||| || |||||||| || || ||| Sbjct 6057 AGCGAAGATTAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTT 6116 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || || || || ||||| || ||||| || | || | ||||| || || | ||| Sbjct 6117 AACATTTTCGATAGTGTCGGATGGCTCCACCTCTAAAGTGATGGTCTTCCCAGTAAGAGT 6176 Query 195123 TTTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 6177 CTTAACGAAGATCTGCAT 6194 Score = 102 bits (112), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || || || ||||||||||| ||||| | | || | |||||||| || || Sbjct 7360 TGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCATCTTCCAGTTGT 7419 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || || || || | ||||| ||||| ||||| || ||||||||||| || ||| Sbjct 7420 TTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTTT 7479 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || || || ||||| || ||| || || | || | || |||||||| Sbjct 7480 GCCTTCACATTTTCGATAGTGTCGGACGGTTCTACCTCTAAAGTGATGGTTTTTCCTGTA 7539 Query 195118 AAAGTTTTTACGAACACTTGCATT 195141 | ||| || || || | |||||| Sbjct 7540 AGAGTCTTAACAAAGATCTGCATT 7563 >seq16183 Length=3749 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||| | ||| || || || || ||||| || || | || || | |||||| Sbjct 867 CAACACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAGCGTGCGCCCATC 926 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| || ||||| || ||||| || |||| |||||| ||||||||||||||||| ||||| Sbjct 927 TTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTC 986 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || ||| ||| ||||| || || || || ||| ||||||||| | || | || Sbjct 987 TTGTATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGT 1046 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || |||||||||||||| | |||||| Sbjct 1047 TTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 1079 Score = 140 bits (154), Expect = 7e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || | ||| || || || ||||||||||| || | || || | |||||||| Sbjct 415 ACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCTTCA 474 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || || ||||||| ||| || ||||| |||||||| ||||| || ||| Sbjct 475 AGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCCTGA 534 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||| || || ||||| || || ||| ||||||||| | || | || || Sbjct 535 ATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTG 594 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || |||| |||||||| || | ||||||| Sbjct 595 CCAGTCAGTGTTTTTACAAATATTTGCATT 624 Score = 138 bits (152), Expect = 3e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| || || || ||||||||||| || | || || | |||||||| |||||||| || Sbjct 198 AGTAGATTCCTTCTGAATATTGTAGTCAGACAGTGTACGTCCATCTTCAAGCTGCTTTCC 257 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 || || ||||| | |||||||||||||||||| ||||| || ||||||||||| ||| Sbjct 258 AGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGAATTTTGGCCTT 317 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || || || || ||||| || || ||||| || || | ||||| || |||| || Sbjct 318 AACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGT 377 Query 195123 TTTTACGAACACTTGCATT 195141 ||||| || | ||||||| Sbjct 378 CTTTACAAATATTTGCATT 396 Score = 125 bits (138), Expect = 2e-23 Identities = 123/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||||||| || || || || ||||| || |||| |||||| || || ||||||||||| Sbjct 9 CCCATCTTCCAGTTGTTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGGGGAATGCCTTC 68 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 |||||| ||||| ||| ||| || || || || ||||| ||| ||||||||| | ||| Sbjct 69 TTTGTCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACTTCTAAGGT 128 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || || |||| ||||| || || | |||||| Sbjct 129 AATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 167 >seq48995 Length=1108 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || ||| | ||| | ||| || |||||||||||||| || || | ||||| Sbjct 213 TCTTAGACGCAGAACTAAGTGCAAAGTAGATTCTTTTTGAATATTATAGTCAGACAGAGT 154 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || || ||||| || || | ||||||||||||||||| || Sbjct 153 GCGTCCATCTTCTAGCTGTTTGCCAGCGAAAATCAGCCTCTGTTGGTCTGGAGGAATACC 94 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||||||||| ||| || || || || || || ||| ||||||||| | Sbjct 93 TTCCTTGTCTTGAATTTTAGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAA 34 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | || || || |||| || ||||| || Sbjct 33 AGTGATAGTTTTCCCAGTCAGTGTCTTTACAAA 1 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| || || || ||||| ||||| || | | || | ||||||||| || || || || Sbjct 417 AGTAGATTCCTTCTGAATGTTGTAGTCTGACAATGTGCGCCCATCTTCAAGTTGTTTTCC 358 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 ||||| || || | ||||||||||| ||||| || || || |||||||||||| || Sbjct 357 AGCGAAAATGAGCCTCTGTTGGTCTGGGGGAATCCCCTCCTTATCTTGAATTTTTGCTTT 298 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || || ||||| ||||| ||| || |||||||| |||| || || || || | ||| Sbjct 297 AACATTTTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTACCAGTAAGAGT 238 Query 195123 TTTTACGAACACTTGCAT 195140 |||||| || | |||||| Sbjct 237 TTTTACAAAAATTTGCAT 220 >seq36723 Length=1181 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 195019 TGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTG 195078 || |||||||| ||||| || ||||||||||| || || |||||| ||||| || ||| Sbjct 1007 TGCTGGTCTGGGGGAATACCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATAGTG 1066 Query 195079 TCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGC 195138 ||||| || || |||||||| | ||||| || || | ||||| ||||| | ||| Sbjct 1067 TCCGAGGGCTCGACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACGAAAATCTGC 1126 Query 195139 AT 195140 || Sbjct 1127 AT 1128 >seq20 Length=148542 Score = 84.2 bits (92), Expect = 5e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 || ||| || | ||| | |||| |||||||| || ||||| ||||| | ||| | | Sbjct 105949 TCGCAACACCATGTGCACGGTGGCTTCTTTTTGTATGTTGTAGTCGGCGATCGTTTTGTC 106008 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||||||||||| || || || |||| ||||| ||||| || || | |||||||| Sbjct 106009 GTCTTCGAGCTGTTTGCCCGCATAGATGAGTCGCTGTTGATCGACGGGCACACCTTCTTT 106068 Query 195045 GTCTTGAATTTTTTGCTTGAC 195065 ||| ||||||||| ||||| Sbjct 106069 GTCGGCAATTTTTTGTTTGAC 106089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1107205968640428