Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq20 253 1e-62 seq32113 102 5e-17 seq1641 102 5e-17 seq16183 86.0 4e-12 >seq20 Length=148542 Score = 253 bits (280), Expect = 1e-62 Identities = 437/634 (69%), Gaps = 8/634 (1%) Strand=Plus/Minus Query 83646 TGTATTTTTAAAGAAACTAAAGACCAACAAATTCACCGACACAATCGACTACCTGATACT 83705 ||| || || |||||||| || |||||||| ||||||||||| || ||||| |||| | Sbjct 87142 TGTGTTCTTGAAGAAACTCAAAACCAACAAGTTCACCGACACCATTGACTATTTGATCTT 87083 Query 83706 GCCCAATTTCACGTTGTGGGATCATAACTTTCTCGTATTTCTCAACAAAAAATTCAATAC 83765 ||| | || | |||||||| || || ||| || | |||||||||||| ||||| | Sbjct 87082 GCCACACTTTATATTGTGGGACCACAATTTTGTCATTTTTCTCAACAAAGCGTTCAACTC 87023 Query 83766 CAA----GAAATCGGGGGGCTTGGTTAACGTGTGGGGTGCCATGCAGAAGGTGACGCTCA 83821 ||| || | | | |||||| || | | | | ||| |||| || | | |||| Sbjct 87022 CAAACACGACAACAG----CTTGGTGGACATTTCGAGCGCCCTGCAAAAAATTAAACTCA 86967 Query 83822 CACAGGGAGTAATCAAGGATCTAATACAAAACAAAAACGGCTACGCTGGTCAGTACCTGT 83881 |||| || | ||||| || | | | || | ||||||||| ||||| | ||| || ||| Sbjct 86966 CACACGGCATCATCAAAGACCAATTGCAGAGCAAAAACGGTTACGCCGTTCAATATTTGT 86907 Query 83882 ACTCCACCTTCCTAAACACGAGCAGTTTCTACGCAAACGTCAAGTGTTTCAACGGTGTAA 83941 | || || || || ||||| | ||||| || ||||| ||||||| ||||| || | Sbjct 86906 ATTCGACGTTTCTCAACACCGCCTCCTTCTATGCCAACGTGCAGTGTTTGAACGGCGTCA 86847 Query 83942 ATGAAATAGTGCCGCCTCCGATGAGTATCAAGCGCTACTACGGTCGTAAAGTGAGAAACG 84001 | ||||| || ||||| | || |||| ||||||||||| || ||| | |||| Sbjct 86846 ACGAAATCGTTCCGCCGCGCGCCAGCGTCAACCGCTACTACGGCCGGCGGGTGGGCAACG 86787 Query 84002 TGCGCGCGTGGAACACACGTCACCCCAACATATCTCAGTTGTCCACGCAGTTTTCCAGCG 84061 ||||||| |||| ||| || ||||||||||| ||| || ||||||| | || || Sbjct 86786 TGCGCGCCTGGACCACGCGACACCCCAACATCAGCCAGCTGAGCACGCAGGTGTCGGACG 86727 Query 84062 TTATACAAACCGACGATGATTGTAGTTGGAGCGTCAATGTTGGCCTTGGTACGTTTGTGG 84121 | | | |||| | ||||| |||||| || ||| | || | ||| || Sbjct 86726 TGCGCCTCAACGACTCCAACACCGATTGGAACGTCAAAGTGGGCTTGGGCATATTTCCGG 86667 Query 84122 GCGCCAACAGAGATTGTGACGGAGACAAGGAAGTGATAACGTATCTGCCTTATCCAAACT 84181 ||||||||| ||||| || || ||||| || | || || | |||||| | || ||| Sbjct 86666 GCGCCAACACCGATTGCGATGGCGACAAAAAAATCATCACCTTTCTGCCGCAACCCAACA 86607 Query 84182 CCCTAGTTGAGTTAGAATCATTATTGTACTGCGACCCCAAATACTCGTTCATCTGCTTTG 84241 || | || | || | ||||||||| ||||||| | ||||| ||||| | Sbjct 86606 GTCTCATCGACCTGGAGTGTTTATTGTACGGCGACCCGCGGTTTAATTTCATATGCTTCG 86547 Query 84242 ACAAAAATCGACTAAGTTTTGTGTCACAACAGAT 84275 |||| |||||||| || || ||||| ||||| || Sbjct 86546 ACAAGAATCGACTCAGCTTCGTGTCCCAACAAAT 86513 Score = 109 bits (120), Expect = 4e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 91916 AACTGACCAGATTCGTGCAATGAATTCATGCCGTTGCGAACGCAATGCAAGCTTTCGGAC 91975 |||| ||| | |||||| | || |||||||||| | || ||||| ||||| | | Sbjct 99247 AACTCGCCACAATCGTGCGGCAAGTTGGTGCCGTTGCGCATCCATTGCAAACTTTCCGCC 99188 Query 91976 AGACAGTTACCCACGAACGATTGATTGATACTCCACTGATCAAGTCGTGTTCCTTCCAAC 92035 | | || ||||| ||||| ||||| | ||||||| || | || || || |||| Sbjct 99187 ATGCGATTGCCCACAAACGACTGATTCTTGGTCCACTGGTCGAAACGCGTGCCCTCCACT 99128 Query 92036 TTTTCGTGTCCCGTCACGTTCTTACCTATAAACTCTTTGTAAATGTTATCCGGCGTGTTG 92095 |||||||| ||||| ||| | || ||||||||| | ||||| || || |||||| Sbjct 99127 TTTTCGTGGCCCGTGTGGTTGCTCTTGATGAACTCTTTGAATATGTTGTCGGGAGTGTTG 99068 Query 92096 TTAAAAAACATGTATGGTAT 92115 ||||| |||||||| ||||| Sbjct 99067 TTAAACAACATGTACGGTAT 99048 Score = 93.3 bits (102), Expect = 3e-14 Identities = 82/101 (81%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 43696 TGGGAACGCGGTTACGAAGACAATTACACTCTGGGACAACAGCTCAGTATTAGAATGACC 43755 ||||| || || ||||| ||||||||||| || || |||||| | || ||| | || ||| Sbjct 101859 TGGGAGCGAGGCTACGAGGACAATTACACGCTCGGCCAACAGTTGAGCATTCGCATCACC 101918 Query 43756 ACAAACTTGATACAGAGCGGTTTAGATTTTAAACA-CAACA 43795 || || ||||||||||||| || ||||||||||| ||||| Sbjct 101919 ACCAAACTGATACAGAGCGGGTTGGATTTTAAACATCAACA 101959 Score = 91.5 bits (100), Expect = 1e-13 Identities = 379/592 (64%), Gaps = 16/592 (3%) Strand=Plus/Plus Query 166 TACATGGTGACCGAGGACCCTTTTCGTGGTCCGGGTAAGAACGTGAGAATCACTCTGTTC 225 || || ||| |||| ||||| || || || || || ||| | | ||| ||||| Sbjct 136662 TATATCGTGGCCGAAGACCCCTTCACCGGGCCCGGCAAAAACCAAAAGCTAACTTTGTTC 136721 Query 226 AAGGAAATCAGACGCGTACAACCCGACACTATGAAACTAGTCTGCAACTGGAGCGGTAAG 285 || || || | || | || ||||| ||||| || || |||||||||||| || Sbjct 136722 AAAGAGATTCGCAATGTGAAGCCGGACACGATGAAGCTGGTGCTCAACTGGAGCGGCAAA 136781 Query 286 GAATTTCTGCGAGAGACCTGGACTCGTTTCATCTCAGAAGAATTCCCCATCACCACCGAT 345 || ||| |||| || || ||||| |||||| || || || ||||| || ||| Sbjct 136782 GAGTTTTTGCGTGAAACTTGGACCCGTTTCGTCGAGGACAGTTTTCCCATTGTCAACGAC 136841 Query 346 CAAGAAATTATGGACCTGTGGTTTGAAATTCAGCTAAGGCCCATGCAACCCAATCGCTGT 405 || || | |||||| ||| | | || | || || |||| | ||||| || ||| Sbjct 136842 CAGGAGGTGATGGACGTGTTTCTCGTGATCAACCTGAGACCCACTCGGCCCAACCGTTGT 136901 Query 406 TACAAGTTCACGATGCAGTACGCGTTAGGTGCGCATCCCGAGTACGTTGCCCACGACGTC 465 |||||||| | || ||||| | || | | |||||||||| | ||||| || Sbjct 136902 TACAAGTTTTTGGCTCAACACGCGCTCCGTTGGGACGCCGAGTACGTGCCGCACGAAGTG 136961 Query 466 ATCAGGCAACAG-GATCCCTACTACGTTGGACCCAACAACATTGAGCGCA---TCAACTT 521 || | || | || ||| ||||| || | ||||| |||| || ||| || Sbjct 136962 ATTCG-CATCGTCGAACCCATGTACGTGGGCCAGAACAA---TGAGTACAGAATCAGTTT 137017 Query 522 GTCCAAGAAAGGATTTGCGTTCCCAC----TGACCTGTCTGCAATCCGTTTACAACGACA 577 | | || || | ||| || | ||| | | || || |||| | || Sbjct 137018 GGCGAAACGCGGCGGCG-GTTGCCCCATCATGAACA---TACACAGCGAGTACACCAACT 137073 Query 578 ACTTTGAAAGTTTCTTTGACGATGTCTTGTGGCCCTACTTCCACAGACCTCTGGTGTACA 637 |||||| ||| | || ||| | ||| |||| ||| || | ||||||| Sbjct 137074 CGTTTGAATCGTTCGTCAACCGCGTCATCTGGGAGAACTTTTACAAGCCCATCGTGTACA 137133 Query 638 TTGGAACCACGTCTTCGGAAATAGAGGAAATCATGATCGAGGTGTCCCTACTGTTTAAGA 697 |||| ||| ||| | ||| |||||||| | ||||| ||||| || |||| || Sbjct 137134 TTGGCACCGACTCTGCCGAAGAGGAGGAAATTCTCATCGAAGTGTCGCTCGTGTTCAAAG 137193 Query 698 TCAAGGAATTTGCACCTGACGTACCACTGTTCACAGGACCCGCCTACTAAAC 749 | || || ||||||||||||| || |||||||| || ||||| || ||||| Sbjct 137194 TTAAAGAGTTTGCACCTGACGCGCCTCTGTTCACCGGTCCCGCATATTAAAC 137245 >seq32113 Length=13445 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || |||||| ||||| |||||||| ||||| | ||| | || Sbjct 7578 CAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTC 7637 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| || ||||| || || || | ||||| || ||| | || | || |||||||| Sbjct 7638 TTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 7697 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||| || ||| || | | || | || | ||||| || | || ||||| Sbjct 7698 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGT 7757 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||| ||||| || || ||||||||||||||||| || Sbjct 7758 TTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 7793 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||| || |||||||||||||| || | || |||| |||| |||||| || || || Sbjct 6003 TTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCGAA 6062 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 ||||| || || |||||| | || | ||||||||||| ||||| || || Sbjct 6063 GATTAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATT 6122 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | || | ||| || || | || ||||| || || || |||||||| || Sbjct 6123 TTCGATAGTGTCGGATGGCTCCACCTCTAAAGTGATGGTCTTCCCAGTAAGAGTCTTAAC 6182 Query 34970 AAAGATCTGCATA 34982 |||||||||||| Sbjct 6183 GAAGATCTGCATA 6195 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || |||||||| | ||| ||||||||||| || ||||| || || | || |||| Sbjct 6211 AATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCATCC 6270 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 |||||||| || || || || || || ||||| || ||| | || | ||||| ||||| Sbjct 6271 TCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCT 6330 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||||| ||| || | | || | || || ||||| || | || || ||| Sbjct 6331 TGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTAATAGTT 6390 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || ||||| ||||||||||||||| Sbjct 6391 TTCCCTGTCAGTGTCTTTACAAAGATCTGCATA 6423 >seq1641 Length=3631 Score = 102 bits (112), Expect = 5e-17 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| || | |||| ||| || |||||||| ||||| || | | ||| |||| || | Sbjct 2365 CAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTA 2306 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 | ||||| || ||||| || | |||||||||||| | || | || ||||| || | Sbjct 2305 GTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGA 2246 Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 | || ||| || | |||| | ||| |||||| || |||| ||| |||||||| | Sbjct 2245 TTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCGACCTCGAGGGTAATGGTTTTAC 2186 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || ||||| || || || ||||| Sbjct 2185 CCGTAAGGGTCTTGACGAAAATTTGCAT 2158 >seq16183 Length=3749 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||||||||| || || || || | ||| |||| || ||||| ||||| ||||| Sbjct 660 TTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAA 719 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || |||| |||||| ||| | || | ||||| || || ||| ||| ||| || Sbjct 720 AATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATT 779 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| | |||||| || | || || || || || || | ||||| || Sbjct 780 TTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAATGTCTTTAC 839 Query 34970 AAAGATCTGCAT 34981 || || ||||| Sbjct 840 GAAAATTTGCAT 851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324000232136352