Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq11297 553 2e-152
seq95541 136 4e-27
seq29470 104 3e-17
>seq11297
Length=12984
Score = 553 bits (612), Expect = 2e-152
Identities = 1197/1789 (67%), Gaps = 27/1789 (2%)
Strand=Plus/Minus
Query 46964 TAATTTGTCTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATA 47023
|| ||| |||| || |||||||||| ||| | ||| |||| |||||| ||||| ||
Sbjct 12754 TATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTA 12695
Query 47024 ATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGA 47083
||||| || || ||||| || | |||| | | |||||| || || | |||
Sbjct 12694 GTACATTCCTGTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTCC 12635
Query 47084 ATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCT 47143
||| |||||| | || ||| || |||| ||||||||| ||||| ||||| || |||||
Sbjct 12634 ATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGATCTATAAAAGCTCCTCT 12575
Query 47144 ATCAGCTGCCATATCTAAAATAACCCTTT--GTGGTATCTCCCATACTGTTTTATAAATT 47201
|||||||||||| | || | ||| ||| ||||||||||| ||||| || |
Sbjct 12574 ATCAGCTGCCATCTGTATGG--ATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAA 12517
Query 47202 TGTTTAATGTCTTCTGGGAGATT---AGTATTTTGAATAGATCCTCCgttttctataatt 47258
| | | || |||| || | || | | | ||| |||||||| ||| | ||||||
Sbjct 12516 TCTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 12457
Query 47259 ttgttttttaa---ttcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGA 47315
||||| | ||||| || || || ||| || | | |||||||
Sbjct 12456 AGATTTTTCATATCTTCATCCCACAAATCAGCCCG---AGTCAAATCAGTCAGAAGATGA 12400
Query 47316 GGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATAT 47375
| || || | ||||||||||||||| ||||| | || ||||| |||| |
Sbjct 12399 TGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAG 12340
Query 47376 GGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCA 47435
||||| | ||||||| | || |||| |||||| ||||| || || || ||||| | ||
Sbjct 12339 GGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCT 12280
Query 47436 ACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCC 47495
| |||| ||| | | |||| |||| ||||| ||| |||
Sbjct 12279 ATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCC 12220
Query 47496 CAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGA 47555
||||| |||| ||| | ||| | |||||| || || || |||| ||| |||
Sbjct 12219 CAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGA 12160
Query 47556 GAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAAT 47615
|| | |||||| | || | ||| | | || ||| | ||||||||| ||||| |||
Sbjct 12159 CTCCCTTGATATGTACTGTACGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAAT 12100
Query 47616 GCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTT-CTGATGATTC 47674
|||| |||||| |||||||||||||||| | || ||| |||||| || | |||
Sbjct 12099 GCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACT-TTC 12041
Query 47675 AAAAGGATANNNNNNNNNNNNNAAT-GTATCTGCCAATCCTTGAACACCAATACCAATTG 47733
||| ||| || | |||||||| || ||||||||||||||||| |
Sbjct 12040 GTAAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAG 11982
Query 47734 GTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAA 47793
||||||| | |||| ||| | ||||| || | ||||| || | ||| ||||
Sbjct 11981 GTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAA 11922
Query 47794 TTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACT 47853
||| |||| | |||||| ||||||| ||||||| |||
Sbjct 11921 CTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATC 11862
Query 47854 TGTTATTTATAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCAT 47913
|||||||| ||||||| | ||||||||||| || || || || || || || || ||||
Sbjct 11861 TGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCAT 11802
Query 47914 TTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAAT 47973
| ||| ||||| | | |||| || ||||| | |||||| ||||| || | ||
Sbjct 11801 CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 11742
Query 47974 TTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTT 48033
||| |||||| | ||||||| || ||||| || | ||| | ||||| ||||| |
Sbjct 11741 TTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCT 11682
Query 48034 CTATCTGAGATTCAATGATAGATTTCCAAACAGTCCT-AGCCTTTATAACAGCTCTAGCT 48092
| | || | ||| || || || ||||| | | || | ||| | | | || |
Sbjct 11681 CCACTTGGGCTTCTATAATTGACTTCCATA-ACTCTTGAGCTCTGACTTGTTTTATAAAT 11623
Query 48093 TTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCT 48152
|| || | ||| ||||| | ||||| | |||||||| || ||| | | | |
Sbjct 11622 CGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCAAAGCAGTCAGCG 11563
Query 48153 AACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTC 48212
| |||||||| |||| ||||||||| | |||| | ||||| |||| |||||| ||
Sbjct 11562 AGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTC 11503
Query 48213 ATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTG 48272
||||| | |||||||||||| | ||| ||| | || |||| ||| | |||||| ||
Sbjct 11502 ATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 11443
Query 48273 CCACTATTCCT-TTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATA 48331
|| | ||| | ||||| | |||||| || | |||||| |||||||| || ||||||||
Sbjct 11442 CCTGTGTTCTTCTTTAAATCCAAGAAT-TCAAATATATCCGCATGCCAAGGCTCTAAATA 11384
Query 48332 TATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTT 48391
||||| | | | || || ||||| || || |||||||||| ||||||||| ||||||||
Sbjct 11383 AATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCGGTATTGTT 11324
Query 48392 ATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACT 48451
||| ||||| |||||||| || | ||||||||| | ||||| || || | || |||
Sbjct 11323 ATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGA 11264
Query 48452 TCCACTAGCTCTTAT---ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATAT 48508
|| |||||| || || || || || |||||| ||||| || |||||| ||
Sbjct 11263 ACCCTGAGCTCTGATGCAATGTGTA--TGTAA-ACCTATGCCACCAGCAGATTTAGAAAT 11207
Query 48509 TAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAA 48568
|| ||||| |||| | |||||| |||| ||||| || ||||||||| ||||| ||
Sbjct 11206 TAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCATCTTTCATAGCTAT 11147
Query 48569 TAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGC 48628
|| ||||| || | || || | || ||| || | ||| || |||
Sbjct 11146 AAGGAAACAGGAGGAAAGCTGTGGCCGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGC 11087
Query 48629 ATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCA 48688
||| |||| |||||||||| | || ||||| || | || || ||| || ||
Sbjct 11086 ATGTGTAAAATATTTCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTC 11027
Query 48689 TTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCA 48737
||| || ||||| || || | ||| | ||| | |||||| ||||||
Sbjct 11026 ACCATGAATGCCTATGGAGACTCTCATAAGCATGTGTTGAGGCCTTTCA 10978
Score = 86.0 bits (94), Expect = 7e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 48744 TTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTAT 48803
|| || ||||| ||||| | ||||||| ||||||| ||||| ||||||||||||||||||
Sbjct 10639 TTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTAT 10580
Query 48804 GAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTTT 48853
||| || |||||| || ||| | || | || | | ||||| | |||
Sbjct 10579 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 10530
>seq95541
Length=3042
Score = 136 bits (150), Expect = 4e-27
Identities = 157/210 (75%), Gaps = 6/210 (3%)
Strand=Plus/Plus
Query 19233 ATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAA 19292
||||| || || |||||| |||||| |||||||||| |||||| ||||| || |||||
Sbjct 2374 ATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGAAA 2433
Query 19293 TCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATT 19352
|| || || || || ||||| || | || || || | || | || ||||| ||
Sbjct 2434 ACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCAAGTT 2493
Query 19353 TTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTT 19412
|||||||| || |||||| ||||||||| |||||||| ||||| || |||||||||||
Sbjct 2494 CTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAATGTTT 2553
Query 19413 TTC---ATCTGAGGTTAATGTATTCCAATC 19439
|| |||| ||||||| | ||||||
Sbjct 2554 CTCACAATCT---TTTAATGTCTCCCAATC 2580
Score = 107 bits (118), Expect = 2e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| || ||| || | |||||| || || || || |||||||| |||| |||||
Sbjct 1445 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTT 1504
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| ||||| ||||| |||||||| || || || ||||| || || || ||||||||||
Sbjct 1505 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAG 1564
Query 19103 CAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAG 19162
||| || | ||||||| | |||| || | ||||| | | ||||| || |
Sbjct 1565 CAATTATACGTTCTCCAAATGTAGCCGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTG 1624
Query 19163 CCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATA 19204
||||||| || |||||||| | || || || | ||| ||||
Sbjct 1625 CCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATA 1666
Score = 93.3 bits (102), Expect = 5e-14
Identities = 83/103 (81%), Gaps = 1/103 (1%)
Strand=Plus/Plus
Query 19442 TAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTAT 19501
||||| ||| ||||| ||||||||||| | |||||||| || || || ||||||||||
Sbjct 2731 TAATACCTTG-GATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTAT 2789
Query 19502 ACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAA 19544
|||| | ||||||||| ||||||| || || ||||| || ||
Sbjct 2790 ACATCTGCCATATATCTGGATATTGGATTGGGAATATTACGAA 2832
>seq29470
Length=9567
Score = 104 bits (114), Expect = 3e-17
Identities = 245/365 (67%), Gaps = 9/365 (2%)
Strand=Plus/Plus
Query 136634 ATGACTCC--TATTAACCCAATGTTGGCAGAATCATGTGAATCTGTAGATAAAGCATTTA 136691
|||||||| ||||| || ||||| || ||| | || | || || || | || | |
Sbjct 3656 ATGACTCCAGTATTA--CCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTATGA 3713
Query 136692 AAAAGTTTCCAAATGGAATATTTGCAGAAATAAAATATGACGGAGAACGTGTACAGGTTC 136751
|||| | ||||||||| || ||| | || ||||||||||| |||||||| || || || |
Sbjct 3714 AAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGTCC 3773
Query 136752 ACAAGAATGGAAACCACTTTGCATTTTTTAGTAGAAACATGAAACCCGTAACAAAACATA 136811
| || || ||||| | || || |||| | | | ||||| |||| || |
Sbjct 3774 ATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCACA 3833
Query 136812 AAGTTGATTATCTTAATGAGTATATACCTAAAGCCTTTAAAAATGTATCATCTCTT-ATT 136870
||||| | || |||| || ||| |||| ||||| ||| || | | || ||| ||
Sbjct 3834 AAGTTAGTCATTTTAAAGATTATTTACCCAAAGCATTTCCTAAAGGA-GATGACTTGATC 3892
Query 136871 TTAGATTCAGAAATAGTACTAGTAGATAAAAATAAT---AAACCATTACCATTTGGCAGT 136927
|| ||| | ||| || | | || ||| |||| | |||||||| || || || |
Sbjct 3893 TTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTACA 3952
Query 136928 TTGGGTATACATAAAAAGAAGGAATATAATGATTCATCACTATGTTTATTTGTATTTGAT 136987
|| ||||| || ||| | |||| ||| ||| | | | || |||| | ||||||||
Sbjct 3953 TTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGCTTATATATATTTGAT 4012
Query 136988 TGTTT 136992
|| ||
Sbjct 4013 TGCTT 4017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560983992185760
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