Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq95541 141 1e-28 seq53757 89.7 6e-13 >seq95541 Length=3042 Score = 141 bits (156), Expect = 1e-28 Identities = 158/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 37444 TTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCT 37503 ||||||| || ||||||| |||| ||||| || || |||| |||||| ||||| || | Sbjct 2370 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 2429 Query 37504 GAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTA 37563 |||||||||| || ||||| ||||||| | |||||| || | | || | || | | Sbjct 2430 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCA 2489 Query 37564 AGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAAT 37623 |||| |||||||| || |||||| |||||||||||| || | |||| || ||||||| Sbjct 2490 AGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAAT 2549 Query 37624 GTCTTTCATCATTTGATAATTTTTTCCAATC 37654 || | ||| || | |||| | | |||||| Sbjct 2550 GTTTCTCACAATCTTTTAATGTCTCCCAATC 2580 >seq53757 Length=4137 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 153288 GGTGTTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCT 153347 || || ||||| ||||| || |||||||| ||| |||||| | ||||| || |||||| Sbjct 211 GGAGTGTTACACACAAAGTTCTGGATAGTCGATCGAAAACATTTCTATATTGGTAGTGCT 152 Query 153348 AATATGGATTGGAGATCACTAACTCAAGTAAA 153379 |||||||| ||||| ||||| ||||| ||||| Sbjct 151 AATATGGACTGGAGGTCACTCACTCAGGTAAA 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591131544467360