Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_017969.1 Length=108853 Score E Sequences producing significant alignments: (Bits) Value seq1361 104 2e-17 >seq1361 Length=62553 Score = 104 bits (114), Expect = 2e-17 Identities = 231/347 (67%), Gaps = 0/347 (0%) Strand=Plus/Plus Query 52940 GTTTAGAATATGAAATCAATACCATGTTCAACTCTAATGGTCAGAGTCCATTTATTACCT 52999 |||| |||||||| |||||||| | |||| || || || || | || |||| | | Sbjct 32532 GTTTGGAATATGAGATCAATACACTTTTCACTTCCAACGGACAAACGCCTTTTACTTCAC 32591 Query 53000 TTGGTTTTGGTCTAGGAACTTCCTGGGAAGCACGTCTAGTACAGAAAGCAGTACTGAAAG 53059 | || || |||||||| | ||| | ||| | | || ||||| | | || Sbjct 32592 TCGGCTTCGGTCTAGGTAAAAATTGGTTTGAACGAGAAATCCAAAAAGCGATTTTACAAA 32651 Query 53060 TACGCATGGATGGTTTAGGTATCAATAAACGTACAGCTATCTTCCCGAAACTGGTATTTG 53119 | || || |||| ||||| | | ||||| ||||| |||||||| ||| || ||||| Sbjct 32652 TCCGAATCAATGGATTAGGCAGTGAGAAACGGACAGCGATCTTCCCAAAATTGATATTTA 32711 Query 53120 TACTTCGCGATGGCGTAAATATGAAACCAGGAGATGTTAATTATGACATCAAGAAGTTAG 53179 ||| || || | ||| | |||||| ||| || ||||||||||| | |||| Sbjct 32712 CACTAAAAGACGGAATCAATCTTAAACCAACTGATCCAAACTATGACATCAAACAATTAG 32771 Query 53180 CTATGAAATGTACTGCTGAACGTATGTATCCAGATTATATCAGCTATGACAAGGTTGTAG 53239 | | ||||| | | || | ||||| |||||| | | | ||||||||| | || | Sbjct 32772 CCTTAGAATGTGCCACAAAAAGAATGTACCCAGATATTCTAAATTATGACAAGATCGTTG 32831 Query 53240 AAGTTACTGGAGACTATAAAGTTTCTATGGGCTGCCGTTCATTCCTA 53286 || | || ||| || ||||| | |||||||| || || ||| || Sbjct 32832 AATTGACAGGAAGCTTCAAAGTACCAATGGGCTGTCGCTCCTTCTTA 32878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347525444165336