Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_018086.1 Length=53996 Score E Sequences producing significant alignments: (Bits) Value seq640 347 4e-91 >seq640 Length=68089 Score = 347 bits (384), Expect = 4e-91 Identities = 498/694 (72%), Gaps = 6/694 (1%) Strand=Plus/Minus Query 5379 ACTAAACGAACCTTTAACGAAGCTTACTTACCCTACATGTACAATCAGCCTGAAGGACAG 5438 ||||||||| ||||||||||| ||| | || ||||| ||||| || || || Sbjct 59361 ACTAAACGATTCTTTAACGAAGTTTATATGAAGTATATGTATAATCAACCGCTTGGGCAA 59302 Query 5439 CACCGTACAATGGTCTTCTATGGAGGCGCTGGTTCAGGTAAGTCTAAGTTCGTTGTTCAG 5498 | |||| ||||||||||| ||||| |||||||| ||||| |||||||| || || ||| Sbjct 59301 AAGCGTATCATGGTCTTCTACGGAGGGGCTGGTTCTGGTAAATCTAAGTTTGTAGTGCAG 59242 Query 5499 AACGCTATCTTAAAAGG-CTTGTCAGAACGCCGTAAGTTCCTAGTCCTACGTAAGGTAGA 5557 ||||| |||||||||| ||| | ||| | || |||||||||||| ||||| || || Sbjct 59241 AACGCCCTCTTAAAAGGGCTTAGC-GAAAGGCGCAAGTTCCTAGTCTGTCGTAAAGTGGA 59183 Query 5558 TAATACTATTCGTGACTCCATCTTCCAAGAGTTTCTAGTCTGCTT-AGAGGAATGGAATC 5616 ||| || || |||||||| |||||| |||||| || | || ||| || ||| Sbjct 59182 TAACACAATCCGTGACTCTATCTTCGCCGAGTTTGTACAAGGTTTGAGA-GAGCTTAATA 59124 Query 5617 TCCTAGACTTCTGTGAGGTAAAGGCTTCGTATATGACTATTAAGCTGCCTAACAAAACAG 5676 | ||| ||||||| || ||| || |||| |||| ||| |||||| ||| | Sbjct 59123 TATATGACATCTGTGACGTTAAGAACAGCTACTTGACGATTACGCTTCCTAACGGAACTG 59064 Query 5677 AGTATATCTTCAAAGGTTTAGAAGACCCTGAGCGAATCAAATCCATCCAAGGTCTTACAG 5736 | || ||||| |||||| | |||||||| ||||| |||||||||||||||||| | ||| Sbjct 59063 AATACATCTTTAAAGGTCTTGAAGACCCAGAGCGTATCAAATCCATCCAAGGTATCTCAG 59004 Query 5737 ACATCATAATGGAGGAAGCTACAGAGTTTACACGAGAGGATTACGACCAACTTCAAACAC 5796 | ||||||||||||||||| |||||||||||| || || ||| || ||| | || Sbjct 59003 ATATCATAATGGAGGAAGCAACAGAGTTTACAGTGGATGACTACTCACAGCTTAACTTAC 58944 Query 5797 GTCTCCGCCACCCTAC-AGCAAGACATCAACAAGTGTTTGTAATGTATAACCCTGCCTCT 5855 ||||||| || | | ||||| || | ||| | | ||||| |||||||| ||| Sbjct 58943 GTCTCCGTAACAAAGCTATCAAGA-ATAACCAAATCACACTCATGTACAACCCTGCTTCT 58885 Query 5856 AAGGACAACTGGGTTTACCAATACTTCCATAACCCTGCTACTAAGCGGCCTAAAGGCTCT 5915 || | ||||||||| || | ||||| ||||| | || ||||| || | Sbjct 58884 AAAGCCAACTGGGTGTATGGAATGTTCCACGACCCTAAGAAACCTCGACCTAAGAACTGT 58825 Query 5916 AAGGTAGTATGTACAACCTACAAGGATAACCGATTCCTTCCTAAAGCTTACCTTGACCAT 5975 | || || ||| || || || || || || ||| | | | | ||||| || | Sbjct 58824 CAAGTGGTTCATACGACTTATAAAGACAATCGTTTCTTATCACAGGACTACCTAGAGAAC 58765 Query 5976 CTACAAGACTTGAAGAACACTAACCCAGTCTATTACGAAATCTATGCACTAGGTAAGTTC 6035 | ||||| ||| ||||||||||||||| || || ||||||||||||||||| |||||| Sbjct 58764 TTGAAAGACATGATGAACACTAACCCAGTTTACTATGAAATCTATGCACTAGGCAAGTTC 58705 Query 6036 GCCAGCTTAGGTAAACGTATTTACACAAACTGGA 6069 || ||| | |||||| | ||||| ||||||| Sbjct 58704 GCAAGCCTTGGTAAAATGGTGTACACGAACTGGA 58671 Score = 300 bits (332), Expect = 5e-77 Identities = 569/830 (69%), Gaps = 12/830 (1%) Strand=Plus/Minus Query 15688 GACTATTCAAACTTTGAAGGAACACTTAAACAAGTACAGATTATCGCAGGCGGTACACAA 15747 |||||| | | |||||| || | ||||| || || || ||||| || |||||| | Sbjct 49048 GACTATGCGACCTTTGAGTCTACCTTGAAACAGGTTCAAATAATCGCCGGTGGTACAGAT 48989 Query 15748 GCCGACATGGACATGCTTGGTGACACGGCTATCGAAATCGGTGGTAAGACTTCCAAAGGT 15807 ||||||||| | | ||| |||| ||||| || | | |||| || || || | ||| Sbjct 48988 GCCGACATGAAACTTCTTAGTGAAACGGCAATAAAGCTTGGTGCCAACACCTCTATTGGT 48929 Query 15808 GCTCAAGAGGTTGCCGAAGCCATGGTGGACTTTGCTAAGCTAGGTTTTACAGCTAAGGAA 15867 || |||||||| ||| | ||| | |||| ||||||||| |||||||||| ||| ||| Sbjct 48928 GCCCAAGAGGTAGCCAATGCCGAGATGGAGTTTGCTAAGTTAGGTTTTACGGCTTCTGAA 48869 Query 15868 ACTTCAGAGGCTATGAAAGGTATCGTATACGCTGCCGAAGCTTCTGGCTCAGGCGTGCAA 15927 ||| | | ||||||| ||| || || || || || || |||||||| ||| || || Sbjct 48868 ACTGCCCAAGCTATGACAGGGATTGTGTATGCCGCTGAGGCTTCTGGTTCATCAATGGAA 48809 Query 15928 GAGACTGCTGGAATCGTAGCAACAGCGCTTAACGTATGGAACCTTAAAGCAACAGAAGCA 15987 || || || ||||| | || | || |||||| | || |||||||| Sbjct 48808 ACTACCTCTAATATTGTAGCGGCTGCTTTAAATACTTGGAACTTAGGTGCGACAGAAGCT 48749 Query 15988 GAACACGTTGCCGATGTTTTAGCTAAGACTGCTAACGAAACGGCCGCTGACATGCAGGAT 16047 |||||||| |||||||| | |||| |||| | || | || || ||||| ||| || Sbjct 48748 GAACACGTAGCCGATGTACTGGCTATGACTTCCAATAAGACAGCTGCTGATATGACAGAC 48689 Query 16048 ATGGGATA--CGTTCTACAATATGCTGGTTCATCAGCTTCCCTAGCAGGAGCTTCTCTGG 16105 | ||||| | ||| |||||||| || | || || || | ||||||||| ||| Sbjct 48688 TTAGGATATACCTTC--CAATATGCAGGGGCTTCTGCCAAACTTGGTGGAGCTTCTATGG 48631 Query 16106 AAGACCTTTCAGC-TATGGCAGGTATCATGGCTGATAACGGTATCAAAGGTTCTAAAGCA 16164 | | | | || ||| |||||||||||||||| | ||||| |||||||||||||| Sbjct 48630 AGCAGTTAGCCGCCTATA-CAGGTATCATGGCTGACCAAGGTATTAAAGGTTCTAAAGCT 48572 Query 16165 GGTACCTCTTTACGTACAGCCTTCACAAACCTTATCAATCCAACAGACGGTGCGGCTGCT 16224 ||||| || |||||||||| || || ||| | | ||| || ||| || || || Sbjct 48571 GGTACAACTCTACGTACAGCATTTACCAACTTAACTGCTCCTACTGACAAAGCCGCCGCC 48512 Query 16225 GCCATGGAAAGCTTAGGAGTACAATTTAAAGACGCTGAAGGAAAAGCACGTCCTACGATG 16284 || | || ||| ||| || || |||| || || || || || | |||| | Sbjct 48511 GCTTTAGACTCCTTGGGAATAAGCTTAGAAGATGCAGACGGTAAGGCTAGACCTATTCCG 48452 Query 16285 GATGTTATCTACGATTTACAGGACGCTGTTAAAGGCATGGATGATATTCAAATCCAAGAG 16344 | |||||| | |||||||| || || | | | | ||| | || | ||| Sbjct 48451 GCTGTTATTGAGGATTTACAAGATGCCACTCAGAACCTTTCTGACTCAGAGATACTAGAC 48392 Query 16345 CTTTCAACAATCCTGTTCGGAAAGCCCGGGGCGGCGGGTATGTCGTTCGTCCTTAAATCA 16404 |||||||| | || || || ||| | || ||||| |||||||| | || | ||| | Sbjct 48391 CTTTCAACTAAACTCTTTGGTAAGACTGGTGCGGCTGGTATGTCTATGGTATTAAAACGA 48332 Query 16405 ACTAAAGAGCAAGTACAAGA---CTTATCAAAAGCTTTGGTAGACTCTACTGGAACAGCT 16461 || ||||| || |||||| |||| | || | ||||| |||| ||||| |||||| Sbjct 48331 ACAAAAGAAGAA--ACAAGAGACCTTA-CTAACGAATTGGTGAACTCCACTGGTACAGCT 48275 Query 16462 GCTAAACAAGCTGCCGAAATGCGTGAGACAATGGCTGGTCAATTAGACCA 16511 ||| |||| ||| | | |||||||||||| ||||||| || |||||||| Sbjct 48274 GCTGAACAGGCTTCTAAGATGCGTGAGACATTGGCTGGACAGTTAGACCA 48225 Score = 277 bits (306), Expect = 6e-70 Identities = 469/669 (70%), Gaps = 24/669 (4%) Strand=Plus/Minus Query 8271 AGATTAAGGATTATGAAGTACACCCTAACTTGCTTCAGAAATTCCCTG--TACTAGAAAT 8328 ||||||| | || || | |||||||| | ||| | | ||||||| ||| ||| | Sbjct 57458 AGATTAAAGGTTTCAGAGAAGACCCTAACGTCCTTAAAATCTTCCCTGCTTAC--GAATT 57401 Query 8329 CATTGCTAACGAAGAACGCCTAGGTGACTTCGAGGCTCAACTATCTTTAATCGACGCTTA 8388 | ||||| |||||||| || |||||||| |||||||||||| |||||| || || || Sbjct 57400 GTTAGCTAATGAAGAACGTCTCGGTGACTTTGAGGCTCAACTAGGTTTAATTGATGCCTA 57341 Query 8389 CAACCTAGCTGTATCAGATAGCGTTAACGACATCGCTTATTGGAATGACGCTTACTTATG 8448 ||| || | || ||||||||||||||||||||||| || ||||| || || |||||||| Sbjct 57340 TAACTTATCCGTCTCAGATAGCGTTAACGACATCGCCTACTGGAACGATGCCTACTTATG 57281 Query 8449 GCTACAAGGATTTGACCTAAGCGCTGATAGTGACTCTATTAGTAACATGAAGAACGACCG 8508 |||||||||||||||||| | ||| |||| ||| | |||||||||||||||||| Sbjct 57280 GCTACAAGGATTTGACCTTTCAGAAGATGGTGAGTCTGTAGCTAACATGAAGAACGACCG 57221 Query 8509 TGTAATCGTAACGGATGAAGACGGCATGGTTAAATTCATTACTAAGGATGTTAACGACAA 8568 |||||| || || || || | || | ||||| || || || ||||| | |||||||| Sbjct 57220 TGTAATTGTTACTGACGAGGCTGGTAACGTTAAGTTTATCACCAAGGACATCAACGACAA 57161 Query 8569 GCATATCGAAAACATTAAGAACCGTGCTAAGCTAG-ACATCTTTAGCCTATCACAAACAC 8627 ||| | || ||||||||||||||||| | | || |||||||||| || || ||||| | Sbjct 57160 GCACGTTGAGAACATTAAGAACCGTGC-ACGTGAGGACATCTTTAGTCTTTCGCAAACGC 57102 Query 8628 CTGACTTGGTATCTAAAGACTTCACAGCAGCTTCAGGGCAAGCTTTGAAAGCAGCTACCC 8687 ||||| | | || || | || | || ||||| || ||| ||| ||| | | Sbjct 57101 CTGACCTAGCCTCCGAACAGTTTGCTGCTGCTTCTGGTGTGGCTATGAGAGCTAAATCAC 57042 Query 8688 AACCACTAGAGAACAAGTCCGCTGTTAAGGAATCTAAGTTCCGTAAAGTCTTAGCTA-AG 8746 | || || ||||| ||| | || | || ||| ||||| || | | || | | Sbjct 57041 AGCCTCTTGAGAATAAGACGGCGATGAAAGAAAGCAAGTTTAAGAAGATGAT-GCAACAC 56983 Query 8747 CGTTACGAGTTGGTGTGTAGC----TACCTTGAGTTTATGAACAAAGCTAAAGACTTGAA 8802 || | | |||| ||||| |||||| | || ||| | |||| | | |||| Sbjct 56982 CGATTC---ATGGT-CGTAGCGGCTTACCTTAAAGCTAAGAAAGAGCCTAATGCCGTGAA 56927 Query 8803 GCCTTA-------TGAAGTTACTCCAGTATTCGTTCGTAACTTACCTCAATCATATGCTG 8855 ||||| || || |||||||| || ||||||||||| || || || |||| Sbjct 56926 -CCTTAAACCGCTAGATGTAGAGCCAGTATTTGTACGTAACTTACCACAGTCTTACGCTG 56868 Query 8856 AGTTAGCAGATATGGCCGTTAAGCTTCGTGACATGCTTCCTGACGAAACTATCATTAATC 8915 || | || || ||||| ||||| | |||| | |||| ||||||||| | | Sbjct 56867 AGCTTGCTGACATGGCTGTTAAATTGAAAGACACAATGTCTGATGAAACTATCTTAGCAC 56808 Query 8916 AGTTCCCAT 8924 | ||||||| Sbjct 56807 AATTCCCAT 56799 Score = 264 bits (292), Expect = 4e-66 Identities = 560/825 (68%), Gaps = 17/825 (2%) Strand=Plus/Minus Query 34765 GAATGGTACCTACAAGAGTTCTACGACCGCAAGGAAGGTAAATCCGTTAAGTTCTGGGAT 34824 || ||||| || ||||| ||| ||||| || ||||| || | ||||||| ||| | Sbjct 24417 GAGTGGTATGCACCAGAGTACTATGACCGTAAAGAAGGCAACATCATTAAGTTTTGGAAC 24358 Query 34825 AGCCATTTCGAAAGCTTAACAGAGCTTATTGGTGGAGGCTATCAATCAGGTAACGTCTAC 34884 ||||| ||| || | ||| |||||| | || || || || ||| ||||| | ||| Sbjct 24357 AGCCACTTCAAAGGGTTAGACGAGCTTTTAGGGGGCGGTTACCAAGGCGGTAATATGTAC 24298 Query 34885 ACATGGTATGGCCGCTCTGGTCGTGGTAAATCTACAATCACTTTAGTAGAAGCTATTGAA 34944 ||||||| || || ||| ||||||||||||| | || | |||||||| | | Sbjct 24297 ACATGGTTTGCTCGAAGTGGGCGTGGTAAATCTATCGTAACCATGGTAGAAGCCTTGTCA 24238 Query 34945 GCAGCTGTACAAGGTGCCAACGTTTTAATGTGGGTTCTTGAAATGCCTAAGTATGAGTTC 35004 || || | ||||| || ||||| | |||||||| | || |||||||| ||||||| Sbjct 24237 GCGGCGATGCAAGGGGCTAACGTCCTTATGTGGGTATTGGAGATGCCTAAATATGAGTGG 24178 Query 35005 GCTTCTCGTGCAATCTCTTTCATCTCAGCACGTGATGAAGTTAA--GAAAAGTCGTATCA 35062 ||||| ||||| | | ||| | || |||| ||||| ||||| | |||| || Sbjct 24177 GCTTCACGTGCCTTTGCATTCCTTTCTGCACAGGATGAGGTTAAACGCTCAGTC--ATTG 24120 Query 35063 ATGGTTCTGACTACTTGGCAGGATTTAACATTGCCAACCTTACTCAAG---CAGCTTTCG 35119 ||||| |||||||| | ||| | ||| | | ||||| |||| ||| | Sbjct 24119 ATGGTGTGGACTACTTAGGAGGCTATAATGTACAAGAGCTTAC-CAAGGGTCAGTT---- 24065 Query 35120 ATACAGCCGAAGAAGAACAAGATTTTGTGGATTTCAT-CAACAGCTTAAACGATAAGTTG 35178 | || || | ||||||||||| ||| || | || || ||| ||| || || | Sbjct 24064 AGACTACC-ACGAAGAACAAGACTTTATGAAGTTTATTCAATCGCTGAAT-GACCGCATC 24007 Query 35179 GAAGGCTCTATCACAATCCGTGCAGTGGATGATGAAGACTTTATGAACCGCTCATTGAAA 35238 ||| || | || || || || ||||||||||||||| | || || | | | Sbjct 24006 TCAGGGTCAGTTACCATTAAAGCGGTAGATGATGAAGACTTTGTTAAGCGTGACGTAAGA 23947 Query 35239 CAGCTTGAACGAGACATCGTAGAAAACGGTGCTGACGTTGTAGTAATCGACCCTTTCTAC 35298 ||| | ||||||||||| ||||| | | ||| |||| ||| | | ||||| |||||| Sbjct 23946 CAGTTAGAACGAGACATTGTAGAGACTGATGCAAACGTAGTAATCGTTGACCCATTCTAC 23887 Query 35299 TACTTGCATTACGAGAAGAACACTTCTAAGACAGCGGGTGGAGACGCTTCTGAAACATCT 35358 ||| || ||| |||||||| ||| ||||||| |||||||| ||| | | || ||| Sbjct 23886 TACATGAGCTACTCTAAGAACACCTCTCAGACAGCCGGTGGAGATGCTGCCAACACCTCT 23827 Query 35359 AAGAAACTACGATTATTAGCAGGACGTACTAAAACTGTTA-TCCATGCAATCACACAGGC 35417 || | ||||| | | ||||| ||||| ||| || || | |||| ||||||||||| Sbjct 23826 AAAGAGTTACGAGGACTTGCAGGTCGTAC-AAAGGTGGTACTACATGTTATCACACAGGC 23768 Query 35418 TGAAGAAGACTCCAACGAAAAAGGTGGAGACGAGCGTGAGCTAAACATTCCAAAACGTTC 35477 ||| |||||| | ||| || || | || |||||| | || | ||| || Sbjct 23767 TGATGAAGACAGTACCGAGAAGCAGGGCAATGAACGTGAGTTGAAATTGCCATCCCGAAG 23708 Query 35478 TAACGTTAAAAAGACCATGTCACTGCTTGAAGACGCCGCTTATGTATTAGCTTTCGATAG 35537 | ||||| ||||| | | |||| ||||| || ||||| | |||||||| ||||| Sbjct 23707 CGAAGTTAAGAAGACTAAGCAGGTGCTAGAAGATGCTTCTTATCTTTTAGCTTTTGATAG 23648 Query 35538 CTGTGATAGCCGCTTTGCTGTAGAGGTCGTTAAAGGCCGCTCAGG 35582 ||||| | |||||||| ||| || ||||| || ||||| Sbjct 23647 TTGTGACGGGCGCTTTGCACTAGGTGTTAAGAAAGGTCGTTCAGG 23603 Score = 255 bits (282), Expect = 2e-63 Identities = 684/1046 (65%), Gaps = 65/1046 (6%) Strand=Plus/Minus Query 7088 TAACGACCCTACTGTAATCCTATCAACACTGGTATCAGAGGCCGATAGAGTA-ATCTATG 7146 ||| |||||||| ||||| |||| | || || | | ||| | || | || |||| Sbjct 58591 TAATGACCCTACCGTAATTATATCGGCTCTTGTCAATAATGACGAGA-AGAAGATTTATG 58533 Query 7147 TGTTCGACGAGTTTGTTAAAACTGGCATGATAGCTCCTGAGATATTCGATGTTATTAAGC 7206 | || |||||||| ||| || |||||| | | |||| | ||| || ||||| Sbjct 58532 TATTTGACGAGTTCTATAAGACCGGCATGTTTAACCGGCAGATTTACGAAGTCCTTAAGA 58473 Query 7207 GTAAGAAGCT--TACCC-ACCAGCTTATCTATGCTGACTCTGCTAACCTTGAAACAATCG 7263 |||||||| || | |||| || | ||||||||| ||| | | || || | Sbjct 58472 AGAAGAAGCTACTAGGCTACCAC---ATGTTTGCTGACTCAGCTGCTCCTAAAGACATAG 58416 Query 7264 AGCAGATAAGACGTCTAGGCGCACGTAAGATTAAGCCTGTTAAGAAAGGCCGTAACACAG 7323 || | |||| ||||||||| |||||| | |||| |||| |||||| ||| | | Sbjct 58415 AGGAAATAAAACGTCTAGGGGCACGTTACCTTAAACCTGCTAAGAAGGGCAAGGATTCTA 58356 Query 7324 TACTTCATGGAATCCAGTATCTACAAGGATATACCATCTATGTTCATCCACGCTGTCAGA 7383 | || || || || | ||||||| | || || ||| | || || ||| || Sbjct 58355 TTAACCACGGTATTCAATTCTTACAAGGTTTTAAGATTATTGTAGACCCCCGTTGTAAGC 58296 Query 7384 ACACTATTAAAGAGCTTGAGAACTACGAATGGAAACCTTCTAAAGGCTCGGACGATTACG 7443 | ||||| ||||| |||||||||| | ||||| |||||| | | || || | Sbjct 58295 ATACTATAGAAGAGTTTGAGAACTATGGTTGGAAGAAGATTAAAGGAACTAATGAGTATG 58236 Query 7444 AGAACGTTCCTAAGCAAAATGGATTCGACCACTGTATGGACGCCTTGAGATATGCAGTTA 7503 ||||| || | | || || ||||||| | || ||| | ||||| || || Sbjct 58235 AGAACAAACCAATCGATAAC---TTTAACCACTGCTTAGATGCCCTTAGATACGCTGTGT 58179 Query 7504 ACGACCTCATTCCACGTAACAAGATTAGAACAATCAACAAGTCGGTGCTAGGGCTTTAAG 7563 ||| | || ||||| |||| | ||||||||||| ||||| |||| |||||| Sbjct 58178 CAGACATGATACCACGGAACACTGTAAGAACAATCAATAAGTCCTTGCT-GGGCTT---- 58124 Query 7564 ACGCCTTAGTACCTTCTTGGGTACAATTATCAGCTAAAAATAAGGAGGATTCAATATGGC 7623 |||||||||| | ||||| Sbjct 58123 ---------------------------------------ATAAGGAGGAACTTAAATGGC 58103 Query 7624 AATCCCTAACGGACAAATAAATGCTGGCGACATTATCACTACTAACATCCGCCGTAAACA 7683 ||| |||||||||||||| || | ||||| | ||||| || || | || | Sbjct 58102 AATACCTAACGGACAAATTAACCCCGGCGATTTAATCACCACAAATGAAAAGAGGAAGTA 58043 Query 7684 CTTCATTAGACGTAACTTTGATTTACGAGAGCTTATCACATTAGCTGAAATGCACTCT-- 7741 | || || | ||||||| | || | ||| | | || || | |||| | Sbjct 58042 CCATATCCGAAGAGACTTTGAACTTGAGGATTTAATCTCCCTTGCAGACAACCACTTTAA 57983 Query 7742 --CGCTCTTCTAGCGCTTATGGAGTTTTATATGACTATTATAAAGGCAATCACATTGCTA 7799 || ||| ||| | |||| ||||||||||||| |||||||| ||||| ||||||| Sbjct 57982 TACG-TCTGCTAAC---TATGACCTTTTATATGACTACTATAAAGGTAATCATATTGCTA 57927 Query 7800 TCCAATCACGTACA-TTTGACGACACTAATAAACCTAACTCAAAAATCGTTCATAACTTC 7858 | || ||| ||| |||||||||||||| ||||||||| || | ||||| |||||| Sbjct 57926 TTCAGCAACG-ACACTTTGACGACACTAACAAACCTAACAGTAAGGTGGTTCACAACTTC 57868 Query 7859 CCTAAACTATTGGTAGACACTTCCACTGCTTACTTAGCAGGTGAGCCTATCACAGAATCT 7918 |||||||| |||| || || || || || | || |||||||||||||| | || Sbjct 57867 CCTAAACTGGTGGTGGATACATCTGTGGCATATCTTGCTGGTGAGCCTATCACTTATTCC 57808 Query 7919 GGCGACGAGAAGACTATCAAAGCAATGCAGCCAGTCTTTAAAGAGAACTATGTTACAGAC 7978 || |||||| | ||||||||||| ||| | || |||| || |||| | || ||| Sbjct 57807 GGAGACGAGGAAACTATCAAAGCGATGGAACCTATCTTCCGTGAAAACTTTATTGATGAC 57748 Query 7979 GTTAACTCAGAGGAAGTTAAGCTTTCAGGAATCTTTGGACACTGCTTTGAAATTCATTGG 8038 ||||| | ||||||| ||| | |||| ||||||||||||||| |||| | ||| Sbjct 57747 CTTAACACTGAGGAAGCTAAATTCTCAGCTATCTTTGGACACTGCATTGAGTTAGCGTGG 57688 Query 8039 ATTGACCGTAACAAGAAACATCGCTTTAAAGCTGTGTCACCAATGAACTGTCTAATTGCT 8098 |||||||| ||| |||| || ||||||| ||||| || | ||||||| | || ||| Sbjct 57687 ATTGACCGCAACGGTAAACTCCGTTTTAAAGTAGTGTCTCCTAAGAACTGTTTCATCGCT 57628 Query 8099 TATTCAGCAGACTTGGATGAAGAGCC 8124 |||||| ||||| ||||| ||||| Sbjct 57627 TATTCAATGGACTTAGATGAGGAGCC 57602 Score = 226 bits (250), Expect = 1e-54 Identities = 266/360 (74%), Gaps = 0/360 (0%) Strand=Plus/Minus Query 13923 TAAAGTAGCAGCACAACGAGGCGGTACATTAAACCGTACAGCGGCAACGTTAGACGTATC 13982 ||||||||| || |||||||| || |||||||||||| |||| | || || || | || Sbjct 52051 TAAAGTAGCGGCTCAACGAGGTGGAACATTAAACCGTTCAGCAGACACCTTGGATGCTTC 51992 Query 13983 TAACAAAGAAGGTTTCGGATGGGACGACGCCGAAGCTGGTAACAAGTCTTGGTCAATCGA 14042 | ||||| | || ||||||| | ||||||||||| || ||||||||| | || Sbjct 51991 TTCTAAAGAGGATTATGGATGGGCTAATAACGAAGCTGGTATTAAATCTTGGTCATTAGA 51932 Query 14043 CTGTGACGGATTGTTCGTAGAGGACAACGAAGGTTTCCAAGCATTGAACGCAGCTTGGGT 14102 ||||||||| ||||||||||| ||||| || ||| | | | |||| ||||||||| Sbjct 51931 CTGTGACGGTTTGTTCGTAGAAAACAACAGCGGGTTCGATGTCCTTAACGTAGCTTGGGT 51872 Query 14103 AAACGGTGACTGTGTACGTGTTCGTGTTAAATTCCCTAGCGGATTAACCTACGTAGGACA 14162 |||||| || || ||||| ||||| ||| |||||| |||||| | |||||| | Sbjct 51871 AAACGGAGATTGCGTACGAGTTCGGGTTCGCTTCCCTTCCGGATTGGTGTTCGTAGGTAA 51812 Query 14163 AGCAATCTTAACTGACTTCCCTTACGAGTTCGGTTATGAAGACGCTGTGACTTACTCATT 14222 || || | || |||||||| |||||| ||||| || |||||||| |||||||| Sbjct 51811 CGCCATTATCACAGACTTCCCAATTGAGTTCCCGTATGACGATGCTGTGACATACTCATT 51752 Query 14223 AACATTCCAAGGTAAAGGCGCTTTAGAAGAGCAACAAGTAGCTCCTACTATCCTACCTAA 14282 |||||| |||||||||||||||| | | | ||| | | |||||| | ||||||| Sbjct 51751 GACATTCGAAGGTAAAGGCGCTTTGGTACAAGCTCAAACAACGCCTACTGTGTTACCTAA 51692 Score = 158 bits (174), Expect = 4e-34 Identities = 292/426 (69%), Gaps = 2/426 (0%) Strand=Plus/Minus Query 37183 GATGGCATTATGATTTGGACTGACCCAGCCACTGGAGAAGAGTATCGGGTAGGCCTTGAG 37242 ||||| | ||||||| || ||||| | || || |||| | || || || |||||| Sbjct 18342 GATGGGCTCATGATTTTCACAGACCCTGAGACAGGTAAAGAACACCGTGTGGGTCTTGAG 18283 Query 37243 GTTAAGTCTAAACAAACTACTCCAGCAGCTACTAGCAAGTTCTCTATGAGACAACCTAAC 37302 |||||||||| ||||| | | ||| ||| || ||| |||| | | || || Sbjct 18282 ATTAAGTCTAAGCAAACCTCCTCTGCAAGAACTTCTCTGTACTCAATGAAAGAGCCGGAC 18223 Query 37303 TCAAAACACGTGTGGCAGGTTAAGAACTACGCTATGTTAAAAGACTTAGACATGTATTTG 37362 || ||||| ||||| |||||||||||||| |||||| | |||||||| | || || Sbjct 18222 AAGAAGCACGTATGGCAAGTTAAGAACTACGCCATGTTACATGACTTAGAAAGTTACTTA 18163 Query 37363 ATTGTCTATGTAAACTGCGCTCACAAGTCTTGGGAAATGACTGAAGAAGACTATGCGAAG 37422 | |||||| |||||| |||| ||| ||||||| || ||| || ||||| ||| Sbjct 18162 GTAGTCTATCTAAACTTTTCTCATAAGACTTGGGAGTATACCTCAGAGGATTATGCTAAG 18103 Query 37423 AATCCAGACTTACAGGTTTTCGGTGTGGATATTACCGAACAAGATAAGAAAGATGTCCGC 37482 | || ||| ||| || || || | || || | ||| ||||||||||||||| | Sbjct 18102 ACACCTGACGTACGAGTATTTGGCATTCATGTTTCAGAAGCAGATAAGAAAGATGTAAGA 18043 Query 37483 AATCGTTTCTTCACAGCCATTGAACATGCTCATGCAGGAACGCTTCCTCCATTAGAGCTT 37542 | | |||| || || ||||||||||||||||||| || |||| | | || || Sbjct 18042 GACAGGTTCTGGACGGCGGTTGAACATGCTCATGCAGGTACTTATCCTGAACTTGA-TTT 17984 Query 37543 AGTGGATT-TACTTTCAGTGACTATAAATACGCATTGGCAAACAGTCTTACTTACAAGGA 37601 | | || || |||| ||| || || || | |||| || || ||| |||||| Sbjct 17983 ATCCGCTTGGACATTCAATGATTACAAGACAGCCTGTGCAAGAAGCCTCACTCTCAAGGA 17924 Query 37602 GTTAGA 37607 |||||| Sbjct 17923 GTTAGA 17918 Score = 136 bits (150), Expect = 1e-27 Identities = 278/408 (68%), Gaps = 4/408 (1%) Strand=Plus/Minus Query 33278 TATGGAGTGAGAACAAAGGCAATGGGAAAACTTCTACGGCAGCTGCTCTCCTAAATGAGT 33337 ||||||| | |||| || ||||| || | |||| ||||| | || ||||||||| Sbjct 25347 TATGGAGCAATGACAAGGGTAATGGCAAGTCCACTACAGCAGCCGTCCTTTTAAATGAGT 25288 Query 33338 ATATGTTCATGTCTTGGCAAGCTTCGGTAATCCGTAAAACAAACATGAAACAACCACCTG 33397 ||| | ||| ||| |||| || ||| | | | ||| | | ||||||||| Sbjct 25287 TCATGATTATGGGATGGAAAGCATCCGTAGCACTTTCACGCAACTGGGATAAACCACCTG 25228 Query 33398 CCTACTTCCTTGACGTAAACAGTTTCCAAACGCTTTACAACAAGTTTACTAGAAATGGAA 33457 | | |||| | || |||||| || ||| | || || || ||||| ||| | ||||||| Sbjct 25227 CATTCTTCTTGGATGTAAACGAGTTACAAGCACTCTATAATAAGTTCACTCGTAATGGAA 25168 Query 33458 TCGCAAAAGACATTGCAGAAAAGACTTCACGAGAGTATTACGAAATGATGGAACTAGCTG 33517 |||| || ||||| || || |||| ||||||||||| |||| || ||| Sbjct 25167 TCGCTCCGGAGATTGCCGAGGAGGCTTCCAGAGAGTATTACCGGCTGATTGACAAAGC-C 25109 Query 33518 AGTC-AGCTCCTTTAGTAGTGTTCGATGAGATAGGTAACCGAAGCGCTACTGAAGCTTTC 33576 | || ||| || |||||||||||||||| || || || ||||| ||||||||| Sbjct 25108 ACTCAAGCACCACTAGTAGTGTTCGATGACATTGGCGTTCGTTCAGCTACAGAAGCTTTC 25049 Query 33577 CGAGCAGACCTTCACGACATCATTAACAAACGAATGGTAAACAAGCTTCCATCAATCTTT 33636 || | ||| | ||| || ||||| ||||| ||||| || ||| || || | | Sbjct 25048 CGTGGAGATATCCACACAATTATTAATAAACGTTTGGTAGACGGTCTTACAAGCATTTAT 24989 Query 33637 ACAAGTAACCATCCAATTG-ACTACTTGGAACAAGTGTTTGATGAACG 33683 || || | ||| |||| | || ||||| || ||||||||||||| Sbjct 24988 ACCTCCAA-CTTCCCATTGAAGTATATGGAAGAATTGTTTGATGAACG 24942 Score = 136 bits (150), Expect = 1e-27 Identities = 383/577 (66%), Gaps = 16/577 (3%) Strand=Plus/Minus Query 22098 TAATTGACTCAAGCAAAGCTCAAACCTACCTTAACGGAGAATTAACGCCAGCTTTAGTAG 22157 || |||||||| |||| |||| ||| | || || | | || || || || | Sbjct 42665 TAGTTGACTCAGAGAAAGGTCAAGTTTACTTGAATGGCGTTCTTACTCCTAAGTTGGTTG 42606 Query 22158 ACCCTATGACCGACTGGTTCCCAATAACCAAAGGTGATAACTACATTGGAGTTAATAACT 22217 |||||||||| || |||||| | | ||||||||||||| || ||||||||||||| Sbjct 42605 ACCCTATGACTGATTGGTTCTCTGTGGATAAAGGTGATAACTTAATCGGAGTTAATAACT 42546 Query 22218 TTAAAGGTAAGATTGACA-TAGTATATAACGAACGATTTAAATAAGGAGGAA-AAGTATG 22275 | || | || ||| || | ||||||||||||||||||| |||||||| | ||| Sbjct 42545 TCGTTGGGGA-TTTAACAGTAATTTATAACGAACGATTTAAAT-AGGAGGAAGTTGAATG 42488 Query 22276 ATTACAGTATTAAATGCA--AACGGACAAACAGTAGCGCATTTTGTCAATAACGTTAGCG 22333 |||||| |||| | ||| || ||| ||| | | || || | ||||| ||| | Sbjct 42487 ATTACA--ATTAGAAGCATTAATGGAGAAATTCTTACACACTTCGACAATAGTGTTCCTG 42430 Query 22334 AAGGGGTACCATACTTTGAGCCTACCATGACGGAGAATATAGAGACGTTGGTTTCAACGT 22393 | || || ||||| || || ||||| || |||| |||| |||||||||| | Sbjct 42429 ACGGTAATCCGTACTTCGAACCAGTGATGACAGATGATATGGAGAGCTTGGTTTCAAGCT 42370 Query 22394 TCTCTTTCTCTGTACCTTTGGAGTGTGAAGAGACCCAATACCTGACAGGCCTTAACAAGG 22453 |||| || ||||| || ||||||| ||||| || ||| || ||| ||||| | | Sbjct 42369 TCTCCTTTTCTGTTCCATTGGAGTTGGAAGACACGGTTTACTTGCAAGGTCTTAATCAAG 42310 Query 22454 TATTAACAAAGGATAAGGATGGTGACTTACGCCAGTTTAATATCATCCATACAGAAGAAG 22513 |||| || || || | || | || | | || | ||||| || | |||| Sbjct 42309 TATTGACTAAAGACCGTCAAGGAGCTCTAAGACTATTCATTATCACAGATGTGTATGAAG 42250 Query 22514 TTTTCCAAGAGGTTGGCTCTCGTATTTT---AGTGGAGTGTGAGGACTTCTCGATTAGCG 22570 | ||||| | | || | |||||| |||||||| | || ||| | Sbjct 42249 AATGGACTACCGTTGG---TGGAATGGTAAAAGTGGACTGTGAGGATATTTCCATTTCTG 42193 Query 22571 AAATGAATGACACTGTAATCTATCCTTTCGATGGCCACAACCTTGGAGACAC-CTTAACG 22629 |||||||||| | ||||| ||||||| |||| || | || ||||| ||||| Sbjct 42192 AAATGAATGATATCGTAATAAGTCCTTTCAATGGTATCAGCTTTCAGGACACACTTAA-T 42134 Query 22630 AAAGCTGTCAAAGGTACTGGATGGGGTGTAGAATACG 22666 ||| || |||| || |||| ||| | ||||||||| Sbjct 42133 AAAACTTTCAATGGCTCTGGTTGGACTTTAGAATACG 42097 Score = 111 bits (122), Expect = 5e-20 Identities = 319/487 (66%), Gaps = 23/487 (5%) Strand=Plus/Minus Query 14663 TAAAGGAGATTACAACATGATTATAAGATTCCAAGGTAAAGACCTTAACCTACGCTTAAC 14722 |||||||||| | || |||||||| ||| ||||||||| || || | | || Sbjct 50094 TAAAGGAGATAAAAA--TGATTATACAATTTCAAGGTAAAAACAGGAATTTGAAAATGAC 50037 Query 14723 ATATAAATCAATCCACTTTCTGGAGTTAGCTTTTGACCAAGACTACGCTTCTTTCATTGC 14782 ||| | || || ||||| | || || |||||| | ||| |||||| |||||| Sbjct 50036 ATACTACTCCATTCACTTGTTAGAATTGGCTTTTCAACAACCTTACGCTAACTTCATTTT 49977 Query 14783 CGAGCAAACACCTTTCAACCAGTCGTTATACATCTTCTGGGCTATGCTTCAGAATGAGTC 14842 || |||||| ||||||||||| || || ||||||||| ||| ||||||| || Sbjct 49976 AGAACAAACAAACTTCAACCAGTCCTTGTATTGCTTCTGGGCGATGATTCAGAACGACAA 49917 Query 14843 TGATTATGAAGGGGTATCGGTACTAGATGTGGCAGAGCTTCTCCAAGACTCTCTGGACAG 14902 || | ||||| ||||||| | | | || || || | | ||||| |||| | Sbjct 49916 AGAGTTCGAAGGTTTATCGGTTCCTCAGATAGCTGACCTCTTGGACGACTCGTTGGAAAA 49857 Query 14903 TTATGAGTTTACCTTAGAGGAATACTTCGACAAAGTTAAC---AGCTCGTATGCTTCAAG 14959 |||||| || ||||| || || ||||| || |||||| |||| | | | || Sbjct 49856 AGGTGAGTTCACTTTAGAAGAGTATTTCGATAAGGTTAACAAAAGCTACTCAGAT---AG 49800 Query 14960 TATCCTTGTTAAACAACTATTCAAAAACAATACAGGCTCG------TTGCCCAGAGGAGG 15013 | | || |||||||||| || || ||||||||| ||||||||| | Sbjct 49799 CTTAATCGTGCAACAACTATT---TAAGAAGACAGGCTCGGACTCTAATCCCAGAGGACG 49743 Query 15014 CGGAAGACGAGGACGAGCTTCCGAAGCTAGACGTAAGATACTTTATGGTATTGTGTACAG 15073 ||| ||| || ||| || | ||||||||||| || ||| || || Sbjct 49742 GGGA----GAG--AGAAACTCCCCTTCTCCAAGTAAGATACTTCTTGCAATTATGCGGAG 49689 Query 15074 ACTTAGGAATACCTTCCAGCGACTTTTGGACAAGTACACCATATGAGTTTAATGGAATGT 15133 |||| | || || | | || |||||| |||||| || ||||||| ||||| || Sbjct 49688 ACTTCGAGATTTCTCCAACAGAGTTTTGGCGAAGTACTCCGAATGAGTTCAATGGTCTGA 49629 Query 15134 TACGAGG 15140 ||||||| Sbjct 49628 TACGAGG 49622 Score = 100 bits (110), Expect = 1e-16 Identities = 176/254 (69%), Gaps = 12/254 (5%) Strand=Plus/Minus Query 17947 GCTACCGCAGTAGGTGTCGGAACACAGTTAGGACAGGGCGGTATCAATCAGGGCG---TA 18003 ||| | ||| | ||| | || || ||| |||| || || |||||| || || | | Sbjct 46546 GCTTCTGCAATGGGTATAGGTACTCAGCTAGGTCAAGGAGGTATCTCCCAAGGTGGGGTC 46487 Query 18004 ATCCATAACGAGCGAGGAAGAGAAGTTACAATGCCTATCCAAAACGCTACTTACATGAGA 18063 ||| || || || || ||||| |||||||||||| || ||||| |||||||||||| Sbjct 46486 ATCACCAATGAACGTGGTAGAGAGGTTACAATGCCTGTCAGCAACGCCACTTACATGAGA 46427 Query 18064 CCTTTCGCAGCAGCTGTGGCCAATGAGCTTCAAGCTATGGGAGGCGGCCTTGGTGGCGGA 18123 ||||||||| ||| | ||| |||| || || | | | || ||| || ||| Sbjct 46426 CCTTTCGCAAGGGCTATTGCCGATGAACT---AGGT---GCATCAGGGCTTAGT---GGA 46376 Query 18124 GGCGTTCAAGAAGTTATCGTTCCATTATACATCAACGATAGAGAATTTGCAAGAGCCACT 18183 || | ||| || || | |||||| | ||| | || | | |||| ||||||| || ||| Sbjct 46375 GGGGCTCAGGAGATTGTAGTTCCAGTTTACCTAAATGGTCGAGAGTTTGCAATTGCTACT 46316 Query 18184 AACAAAGCTATGAC 18197 ||||| | ||||| Sbjct 46315 AACAAGGACATGAC 46302 Score = 98.7 bits (108), Expect = 3e-16 Identities = 94/118 (80%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 4098 CGTCAAAGAAAGTATTTAACAACTTCCAAAGAGCCTGACGA-ATACGAGGGAGTTGACTT 4156 ||||| ||| ||||| | || ||||| |||| ||| || | ||| || ||||||||||| Sbjct 59993 CGTCAGAGACAGTATATGACTACTTCTCAAGAACCT-ACTACATATGATGGAGTTGACTT 59935 Query 4157 AACTACATTAAAACCTAAAATGAAACGCTTTGCGAGACATTACATGCAAACTATGAAC 4214 |||||| | ||||||||||||||||| ||||| || || |||||| ||| ||||| Sbjct 59934 AACTACTCTTAAACCTAAAATGAAACGTTTTGCAAGGCACTACATGTCCACTGTGAAC 59877 Score = 93.3 bits (102), Expect = 1e-14 Identities = 137/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 23108 ACCCTGAGCAAGTTTACCGACAAGGTGTAGAAGAGCTTCTAAAACACATTGCACCAGTAT 23167 ||||||| | |||||||||| ||| | |||||||| ||| | | ||| | | Sbjct 41652 ACCCTGAACTAGTTTACCGAGAAGCCATTAAAGAGCTTAAAAAGTATGCGGAGCCAATCT 41593 Query 23168 ATACGTATACTGTTAACGTAATCCTTCT--AAACCGTGTTCAAGGATGGGAAGGGGAGAC 23225 |||| || | || || ||||| ||||| ||| | | || |||||||| || ||| Sbjct 41592 ATACTTACAAGGTCAATGTAATTCTTCTTCAAAACATC--CACGGATGGGATGGTGAGGA 41535 Query 23226 CTTAGCTCTAGGTGACACAGTATGGATGAAAGAGCGTGTAGGCTCTCGTGAAATTGGATT 23285 | | |||||||||||||||||||||||||| ||||| || ||||| | || || Sbjct 41534 TATTGAACTAGGTGACACAGTATGGATGAAAGAACGTGTGGGAAACCGTGAGTTAGGTTT 41475 Query 23286 GGAAGCACGTGT 23297 |||||| ||||| Sbjct 41474 GGAAGCCCGTGT 41463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172337363126064