Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_018855.1 Length=169158 Score E Sequences producing significant alignments: (Bits) Value seq1361 87.8 2e-12 >seq1361 Length=62553 Score = 87.8 bits (96), Expect = 2e-12 Identities = 405/634 (64%), Gaps = 18/634 (3%) Strand=Plus/Plus Query 59340 TATCCATTTCCATGATATTGATTATTCCCCTGCTCTTCCATTTACTAATTGCTGTTTAGT 59399 |||||||| |||||| | ||||| || | ||| | || ||||||||||| | Sbjct 32182 TATCCATTATCATGATCTCGATTACCATCCGTATACACCAATGACAAATTGCTGTTTGAT 32241 Query 59400 AGATTTAAAAGGAATGCTTGAA-AACGGGTTTAAGCTAGGTAATGCTCAAATTGAAACGC 59458 || || ||||| ||| ||||| ||||||||||| | || ||||| || | ||| | | Sbjct 32242 CGACTTCAAAGGTATG-TTGAACAACGGGTTTAAAATTGGAAATGCAGAAGTCGAATCAC 32300 Query 59459 CTAAATCGATTGGTGTTGCTACTGCAATTATGGCACAAATTACCGCACAGGTTGCTTCAC 59518 | |||||||| || || ||| || |||| || | || | ||||| || Sbjct 32301 CAAAATCGATCCAAACAGCAACGGCACAGATTTCACAGATCATTGCCAATGTTGCATCTA 32360 Query 59519 ATCAGTACGGCGGAACGACTTTTGCTAATGT---AGATAAAGTACTTTCTCCTTATGTTA 59575 || || |||||| || ||| || |||| || | ||| |||||| || Sbjct 32361 GCCAATATGGCGGATG---TTCTGCCGATCGCACAGATGAATTGCTTGCTCCTTTTGCAC 32417 Query 59576 AACGCACCTATGCAAAACATATTGAGGATGCAGAAAAATGG-----CAAATCGCTGATGC 59630 || | || ||||||| | ||||| || ||||| || | | | | | Sbjct 32418 AATTAAATTACAAAAAACATTTAATTGATGCCAAAGAATGGATCGACACACC-CGAACGG 32476 Query 59631 GTTGAAT--TATGCCCAATCTAAAACAGAAAAAGACGTATACGATGCATTTCAAGCTTAT 59688 ||| ||||| || | ||||| ||||||| | | ||||| | ||| || Sbjct 32477 CAAGAAGCCTATGCAAAAGCAAAAACCAAAAAAGATATTTTTGATGCCATGCAAAGTTTG 32536 Query 59689 GAGTATGAAGTAAATACTCTTTTTAGCTCAAACGGTCAAACGCCTTTTGTAACAATTACA 59748 || ||||| | ||||| ||||| | || ||||| |||||||||||| || | Sbjct 32537 GAATATGAGATCAATACACTTTTCACTTCCAACGGACAAACGCCTTTTACTTCACTCGGC 32596 Query 59749 TTTGGTACTGGAACTGACTGGACTGAACGAATTATTCAGAAAGCAATTCTTAAAAACCGC 59808 || ||| || | | ||| ||||||| || || ||||| ||| | ||| ||| Sbjct 32597 TTCGGTCTAGGTAAAAATTGGTTTGAACGAGAAATCCAAAAAGCGATTTTACAAATCCGA 32656 Query 59809 ATTAAAGGCCTTGGTCGTGATGGAATAACTCCTATTTTCCCTAAACTTGTTATGTTCA-T 59867 || || || | || |||| | || | || ||||| ||| ||| ||| | || | Sbjct 32657 ATCAATGGATTAGGCAGTGAGAAACGGACAGCGATCTTCCC-AAAATTGATATTTACACT 32715 Query 59868 TGAAGAGGGTGTCAATCTTTATAAAGACGACCCGAACTATGATATTAAGCAGCTTGCTCT 59927 |||| || |||||||| | | || || |||||||| || || || | || | Sbjct 32716 AAAAGACGGAATCAATCTTAAACCAACTGATCCAAACTATGACATCAAACAATTAGCCTT 32775 Query 59928 AGAGTGTGCAAGCAAAAGAATGTATCCTGATATT 59961 ||| ||||| | ||||||||||| || |||||| Sbjct 32776 AGAATGTGCCACAAAAAGAATGTACCCAGATATT 32809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540094676563520