Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq20 217 1e-51 seq41575 181 8e-41 seq123773 178 1e-39 seq32113 123 2e-23 seq16183 98.7 8e-16 seq22628 89.7 4e-13 seq18661 82.4 6e-11 >seq20 Length=148542 Score = 217 bits (240), Expect = 1e-51 Identities = 449/659 (68%), Gaps = 22/659 (3%) Strand=Plus/Minus Query 99397 TGTGTTCTTGCGTAAACTAAAAATAAACAAACTAACAGACGACATCAACTATCTGATCCT 99456 |||||||||| ||||| |||| ||||| | || ||| ||| ||||| ||||| | Sbjct 87142 TGTGTTCTTGAAGAAACTCAAAACCAACAAGTTCACCGACACCATTGACTATTTGATCTT 87083 Query 99457 GCCAAACTTTACTCTGTGGGACCATAATTTTTTGGTGTTTCTGAACAAAAAATTCAACAG 99516 |||| |||||| |||||||||| |||||| | | ||||| |||||| |||||| Sbjct 87082 GCCACACTTTATATTGTGGGACCACAATTTTGTCATTTTTCTCAACAAAGCGTTCAACTC 87023 Query 99517 CAAGAAACG-CGGCGGTCTATTGAATATTTGGGGCTGCATGCAAAAAACACCTCTCGCGC 99575 ||| | ||| | | | | || | |||| | || | ||||||||| ||| | | Sbjct 87022 CAA-ACACGACAACAGCTTGGTGGACATTTCGAGCGCCCTGCAAAAAATTAAACTCACAC 86964 Query 99576 AGGGCGTGATAAAAGATTTAATTCAGAACAAGAACGGTTATGCCGGTCAGTATTTGTACT 99635 | ||| | || ||||| | | |||| ||| |||||||| |||| ||| |||||||| | Sbjct 86963 ACGGCATCATCAAAGACCAATTGCAGAGCAAAAACGGTTACGCCGTTCAATATTTGTATT 86904 Query 99636 CGACCTTTCTAAACACGAGCAGTTTTTATGCCAACGTGCAGTGTTTCAACGGTATCAACG 99695 |||| ||||| ||||| | || |||||||||||||||||||| ||||| |||||| Sbjct 86903 CGACGTTTCTCAACACCGCCTCCTTCTATGCCAACGTGCAGTGTTTGAACGGCGTCAACG 86844 Query 99696 AGATTTTGCCACCCAAGATGAGCATCCAACGCTACTATGGCCGACCCGTTGATAACGTCA 99755 | || | || || ||| || | |||||||| ||||| | || | ||||| Sbjct 86843 AAATCGTTCCGCCGCGCGCCAGCGTCAACCGCTACTACGGCCGGCGGGTGGGCAACGTGC 86784 Query 99756 AGGTGTGGAACACGCGTCATCCCAACATCTCGCAGCTATCAACACAATATTCCCGAGTGT 99815 | |||| |||||| || ||||||||| |||| | | || | | |||| Sbjct 86783 GCGCCTGGACCACGCGACACCCCAACATCAGCCAGC--TGAGCA-------CGCAGGTGT 86733 Query 99816 -TGATGT-CGGAT-AACGTGT------GTGATTGGAACGTTAAAATCGGATTAGGCACTT 99866 || || || | |||| | ||||||||||| ||| | || || |||| | Sbjct 86732 CGGACGTGCGCCTCAACGACTCCAACACCGATTGGAACGTCAAAGTGGGCTTGGGCATAT 86673 Query 99867 TTGTGGGAGCAAACAGAGACTGCGACGGCGACAAGGAGGTGATCACCTATTTGCCGTATC 99926 || ||| || |||| || ||||| |||||||| | | ||||||| | ||||| | | Sbjct 86672 TTCCGGGCGCCAACACCGATTGCGATGGCGACAAAAAAATCATCACCTTTCTGCCGCAAC 86613 Query 99927 CCAACTCGCTGTTAGACCTAGAATCGCTGTTGTATTGTGATCCTAAATACAGCTTTTTGT 99986 ||||| || | ||||| || | | ||||| | || || | | || | | Sbjct 86612 CCAACAGTCTCATCGACCTGGAGTGTTTATTGTACGGCGACCCGCGGTTTAATTTCATAT 86553 Query 99987 GTTTCGACAA-AAACAAATTATCGTTTGTTTCCCAGCAAATTTACTATCTGTACAAAAA 100044 | |||||||| || | | | | | || || ||||| |||||||||||||||| |||||| Sbjct 86552 GCTTCGACAAGAATCGACTCAGC-TTCGTGTCCCAACAAATTTACTATCTGTTCAAAAA 86495 Score = 163 bits (180), Expect = 2e-35 Identities = 387/577 (67%), Gaps = 12/577 (2%) Strand=Plus/Plus Query 178 GAGGATCCCTTCCGCGGACCCGGCAAGAACGTACGCATCACCCTGTTCAAGGAGATTCGT 237 || || |||||| ||| |||||||| ||| | | || ||||||| |||||||| Sbjct 136674 GAAGACCCCTTCACCGGGCCCGGCAAAAACCAAAAGCTAACTTTGTTCAAAGAGATTCGC 136733 Query 238 CGAGTCCACCCCGACACAATGAAGCTCGTGTGCAACTGGAGCGGAAAAGAGTTTCTTCGC 297 || | || ||||| |||||||| ||| |||||||||||| ||||||||| | || Sbjct 136734 AATGTGAAGCCGGACACGATGAAGCTGGTGCTCAACTGGAGCGGCAAAGAGTTTTTGCGT 136793 Query 298 GAAACGTGGACGCGTTTCATTTGCGAAGAG-TTTCCCATCACCACCGACCAAGAAATCAT 356 ||||| ||||| |||||| | | | | || |||||||| || |||||| || | || Sbjct 136794 GAAACTTGGACCCGTTTC-GTCGAGGACAGTTTTCCCATTGTCAACGACCAGGAGGTGAT 136852 Query 357 GGACCTGTGGTTCGAGCTCCAGCTTAGACCGATGCAGCCCAACCGCTGTTACAAATTTAC 416 |||| ||| ||| | || | || ||||| | | ||||||||| |||||||| ||| Sbjct 136853 GGACGTGTTTCTCGTGATCAACCTGAGACCCACTCGGCCCAACCGTTGTTACAAGTTTTT 136912 Query 417 GATGCAGTACGCTCTCTGTGCTCATTCCGACTATGTTGCCCACGACGTCATCCGTCAGC- 475 | || |||| ||| || | |||| || || | ||||| || || || || | Sbjct 136913 GGCTCAACACGCGCTCCGTTGGGACGCCGAGTACGTGCCGCACGAAGTGATTCG-CATCG 136971 Query 476 AGGATCCTTACTATGTTGGCCCAAACAATATTGAGCGCATCAACCTGACCAAAAAGGGAT 535 || || || || |||| |||||| | | |||| || | ||| || Sbjct 136972 TCGAACCCATGTACGTGGGCCAGAACAATGAGTACAGAATCAGTTTGGCGAAACGCGGCG 137031 Query 536 TCGCATTCCCCCTCACTTG----TCTCCAGTCAGTTTACAACGAGAACTTTGAAGAGTTC 591 || | |||| ||| || | ||| || |||| | | |||||| |||| Sbjct 137032 GCGGTTGCCCCATCA--TGAACATACACAGCGAG--TACACCAACTCGTTTGAATCGTTC 137087 Query 592 TTTGACGACGTTCTATGGCCCTACTTCCACAGACCCCTCGTCTACGTGGGCACCACTTCC 651 | || ||| | ||| |||| ||| ||| |||| ||| | |||||| || Sbjct 137088 GTCAACCGCGTCATCTGGGAGAACTTTTACAAGCCCATCGTGTACATTGGCACCGACTCT 137147 Query 652 GCCGAGACCGAGGAGATCATGATCGAAGTGTCTCTTCTGTTCAAGATCAAAGAGTTTGCA 711 ||||| ||||| || | ||||||||||| || ||||||| | |||||||||||| Sbjct 137148 GCCGAAGAGGAGGAAATTCTCATCGAAGTGTCGCTCGTGTTCAAAGTTAAAGAGTTTGCA 137207 Query 712 CCTGATGTACCACTGTTCACCGGCCCAGCCTACTAAA 748 ||||| | || ||||||||||| || || || |||| Sbjct 137208 CCTGACGCGCCTCTGTTCACCGGTCCCGCATATTAAA 137244 Score = 141 bits (156), Expect = 7e-29 Identities = 266/389 (68%), Gaps = 24/389 (6%) Strand=Plus/Minus Query 108888 CCGTTACGTATACAATGTAATCCTTCGGATAATCGATTACCCATAAACGACTGATTAATA 108947 ||||| || || || || || | ||| | | ||||| |||| |||||||||||| | Sbjct 99217 CCGTTGCGCATCCATTGCAAACTTTCCGCCATGCGATTGCCCACAAACGACTGATTCTTG 99158 Query 108948 CTCCACTGGTCTAAGCGGGTCCCCTCCAACTTTTCGTATCCAGTAATGTTTTTGCAGATA 109007 |||||||||| || || || ||||||| ||||||| || || ||| | ||| Sbjct 99157 GTCCACTGGTCGAAACGCGTGCCCTCCACTTTTTCGTGGCCCGTGTGGTTGCTCTTGATG 99098 Query 109008 AACTCTTTGTATATCGTGTCTGGTGTGTTGTTGAAGAACATGTACGGTATCTTGATGAGA 109067 ||||||||| |||| |||| || |||||||| || |||||||||||||| || | | Sbjct 99097 AACTCTTTGAATATGTTGTCGGGAGTGTTGTTAAACAACATGTACGGTATGTTAAATATG 99038 Query 109068 GGATACTTGGTACCGTTGTCTTGTACACAAT----ACCG-----AATGT-CTAG---TC- 109113 ||||| | |||| | || ||| |||| | || || | || Sbjct 99037 GGATAGCGCGGCGCGTTCGGGTCGGCAAAATTTCCACCGCGCACCACGTACTTGCGCTCA 98978 Query 109114 ----CGTCAAAGCTGGTTTGTCGCGACAAATATGATATGGGCGATAAGCAGATTTGCGCG 109169 |||||||| ||| || ||||||| | | || | |||||| | ||||||||| ||| Sbjct 98977 ATGTCGTCAAAGTTGGACTGGCGCGACAGAAACGAGACGGGCGACAGGCAGATTTGTGCG 98918 Query 109170 TGAATGCGGCGGTCGTCGTGTGCCCGAAACGCGCTCAAATCTTCGGCCTCGCTGAGCACC 109229 || ||| |||| | ||| || || ||| ||||||| || | ||| |||| Sbjct 98917 TGCGTGC------CGTCTTCCGCCATCCACTCGGTCAGATCTTCGCTCTTGTTGAACACC 98864 Query 109230 CCCTTTTGGCCGTGTATACCGCATATTTT 109258 |||||||||||||| || ||||| ||||| Sbjct 98863 CCCTTTTGGCCGTGGATGCCGCAAATTTT 98835 Score = 118 bits (130), Expect = 8e-22 Identities = 167/233 (72%), Gaps = 10/233 (4%) Strand=Plus/Minus Query 110847 TAATCTTTGGCGTACACGTCCCTGACATAGAGTATGTCATCTTTGCGGTCGTACACTAGC 110906 ||||| ||||||||||||| | || | | | || || | ||||||||| || Sbjct 96910 TAATCGCTGGCGTACACGTCGCGCGCAAACAACACATCGTCCTGCTTGTCGTACACCAGT 96851 Query 110907 TGTATGGCTCTATTGATGAACTTTTCGTTGTCATAGTTGCCGTACAGAAACATGCGCCGC 110966 || ||||| | ||||||| ||| || | ||| ||||||||||| |||||| ||| Sbjct 96850 TGGATGGCACGATTGATGTGCTTCTCCTGGTCGACGTTGCCGTACAAAAACATACGC--- 96794 Query 110967 ATATTTTTATCTCTGGCATAGCGTTTGTCGAAAAAGTTGTGCAGCAACACGTTGTTGTTC 111026 || || | | || || |||||||| |||| |||||| ||| | |||||||||| Sbjct 96793 ---TTGCAATGTTTTGCGTATAGTTTGTCGTAAAAATTGTGCGCCAAAATGTTGTTGTTC 96737 Query 111027 ATCATTATGTTGGGGAAC--GAGAAATGACGACCGTCCACTATGAACGTGCCC 111077 || | |||||||| || |||||| |||||||||| |||||||||||| Sbjct 96736 ATGAGAATGTTGGGAAAGCTGAGAAAC--CGACCGTCCAACATGAACGTGCCC 96686 Score = 100 bits (110), Expect = 2e-16 Identities = 231/335 (69%), Gaps = 15/335 (4%) Strand=Plus/Minus Query 54361 GGCGGTGGCGGCAGCAATGACGACGGACGTTCATAGTCGTAATTTCTCAGTTCTGACAAG 54420 ||||| ||||||| || || |||||| | || ||||| || | || |||| ||| Sbjct 15153 GGCGGCGGCGGCAACATTGGCGACGGCCTCGTGTAATCGTAGTTGCGCAACTCTG-CAA- 15096 Query 54421 ACGT-TTGTGGTCAATAA-CTTGAACGTTGTCATGATTGATTCGCCAAGAATAAACGACA 54478 |||| |||| | | | | ||||||||| ||| || | ||||| || | ||| | Sbjct 15095 ACGTGTTGTTGGCGAGCAGCTTGAACGTGATCAGTATGGTGTCGCCGAGCACGAACCCGA 15036 Query 54479 AAAACGTTTCGTACCACGGCTGCGTGCACGCGACATCGTTAT-AG-TGTCTGCCAAACCG 54536 || | || |||| || || ||| || | | | || || | ||||||||| || Sbjct 15035 TCAAGCTCTCCCACCATCGCAACGAACACCCGCCGT--TAATGAGATTTCTGCCAAAACG 14978 Query 54537 GCGACAGTACGCCTCGTTGAAGCGGCCCGTGATTTTCTCTGGAAAGTTAGG--ATCGTCG 54594 |||||| |||||||||||||| |||||| || ||| || || |||| || ||| Sbjct 14977 GCGACAATACGCCTCGTTGAAACGGCCCTCGAACGCCTCGGGGAA--TAGGGAATGCTCG 14920 Query 54595 CT-GTAGGC--CACATCAAAGGCGGGCACGTCGTCCACGCCACGAATCACATGTGTGTCG 54651 | || || ||| |||||| ||||||||||||| ||||| | || ||| | ||| Sbjct 14919 TTTGTGGGGTGCACGTCAAAGCCGGGCACGTCGTCGACGCCCTGTATTGAATGCGCCTCG 14860 Query 54652 GTCCGCATGTACGGGGAATTGAACCACATTTTGGT 54686 || |||| ||||||| |||| |||||||||| Sbjct 14859 GTGCGCAGGTACGGGCTGTTGAGGTACATTTTGGT 14825 Score = 84.2 bits (92), Expect = 2e-11 Identities = 123/172 (72%), Gaps = 3/172 (2%) Strand=Plus/Plus Query 69045 GTCTGCAAGACGGATGGGACATTTTCTTCAGACCAATGTTGGGTATACCGGTGCTGTTCT 69104 |||||||| ||||||||||||| ||| ||||||||||||| ||| | ||| || || | | Sbjct 46239 GTCTGCAAAACGGATGGGACATATTCCTCAGACCAATGTTTGGTTTGCCGCTGTTGCTGT 46298 Query 69105 TTGTGTTGTTCAAGACCGACATGAGCGGCATCGACGACGAAATATTCAACACCGACAACA 69164 |||||||| ||| || | | | || | || |||| || ||||| |||| Sbjct 46299 ACGTGTTGTTACGCACCAACTTTA--GTCAGC-ACAACGACATCATCAACGAAAACAATC 46355 Query 69165 TTATCACCAACACCCTGTTGCAGTTTTTCTACAATTTATTGAGCGACAAAGC 69216 | || || | | | ||||||||||||| ||||| | |||||||||| Sbjct 46356 TGATTACGCAAATATTTGTGCAGTTTTTCTATAATTTGATTTGCGACAAAGC 46407 >seq41575 Length=3752 Score = 181 bits (200), Expect = 8e-41 Identities = 482/731 (66%), Gaps = 9/731 (1%) Strand=Plus/Plus Query 27695 GGAACCGTGGTGGCCGCTTACTTTGTCGAGTGGGGTGTGTATGGTAG-ACAGTATCCGGC 27753 |||| || |||| || ||||| || || |||||||| ||| ||| | | | ||| Sbjct 1067 GGAAAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTG 1126 Query 27754 CAACAAACTACCCATACCAAATCTGACACATTTGCTGTACGGCTTTGTGCCCATTTGCGG 27813 | | | |||| ||||| ||||| || ||||| || ||||||||| | || |||||||| Sbjct 1127 GATCGTA-TACCTATACCTAATCTTACTCATTTACTCTACGGCTTTATTCCAATTTGCGG 1185 Query 27814 CGGAGACGGTATCAACGATAGCCTAAAACAGATCCCCAATTC--TTTTGAGGTCCTCCAA 27871 ||| ||||| ||||| ||||| ||||| ||||| || | ||| | | || || Sbjct 1186 CGGTGACGGCATCAATGATAGTTTAAAAGAGATCG--AAGGCAGTTTCCAAGCACTACAG 1243 Query 27872 AAGTCATGCTCAAACCGAGCCGACTTTAGTGTGAGCATACACGATATATGGGGCGCGCTG 27931 ||| || ||| | ||||| | || || |||||| ||||| || | Sbjct 1244 CGGTCCTGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTA 1303 Query 27932 CAAAAACCGCAAAAGGGTGTAGAGGCGTGGAACGAGCCGTACAAGGGTAACTTTGGCCAG 27991 |||||||| ||||| || | | ||||||||||| ||||| || |||||||| || Sbjct 1304 CAAAAACCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGTCAA 1363 Query 27992 TTGATGGCCATCAAACGACACCATCCCCACCTATCCATACTGCCCTCGATTGGTGGGTGG 28051 || ||| | | |||| | || || | | || || ||||| |||||||||||| Sbjct 1364 TTAATGTCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGG 1423 Query 28052 ACTCTGAGCGATCCATTCTTTTTTATGCACGACCCGGCCAAGCGTGCCGTGTTTGTAGAG 28111 || || |||||| ||||| ||| | ||| | ||| | | ||||| || Sbjct 1424 ACGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAG 1483 Query 28112 TCTGTGCGCGAATTTCTGCAAACGTGGAAGTTCTTTGACGGAGTCGATTTGGACTGGGAG 28171 || || || ||||| | ||| ||||| ||||| || || || ||| | || |||||| Sbjct 1484 TCAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAG 1543 Query 28172 TTTCCGGGTGGAAAGGGAGCCAACCCCGCGATCGGTAACCCCGACATTGACGCAAAAACG 28231 || || ||||| || || || ||||| | |||||| ||| || || | | Sbjct 1544 TTCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGGTAGCCCAGA---AGATGGTGATTGT 1600 Query 28232 TACACCGCGCTGTTGCGCGAACTAAGATTTATGCTGGACGAGTTGGCGGaaaaaaaCGAT 28291 || || || ||| || | ||||| || ||| | | | || || | | Sbjct 1601 TATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCTAAGAATGGT 1660 Query 28292 CGCGTCTACCAACTAACCACCGCTATTAGCGCCGGGCATGATAAAATACAAGTGGTCAAC 28351 ||| || |||| | ||||||||||| || |||||||| ||||| || || Sbjct 1661 AAGAAATACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTTGAC 1720 Query 28352 TACGCTTCGGCCCAAAAACATCTGGACCACATTTTCGTTATGAGTTACGATTTTAGGGGC 28411 || | ||| ||||| || |||| || |||||| | ||||||||||| || | ||| Sbjct 1721 TATGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGA 1780 Query 28412 GCCTGGTCCAA 28422 |||||||| || Sbjct 1781 GCCTGGTCAAA 1791 >seq123773 Length=735 Score = 178 bits (196), Expect = 1e-39 Identities = 334/484 (69%), Gaps = 23/484 (5%) Strand=Plus/Minus Query 7828 CGTCTGCTCACGTTCAAGGACTGGCCGAAGAGTATAAAGCAGAAACCAAAGCAGCTTGCC 7887 || |||| || |||| |||||||| ||||| |||||||| || || | || ||| Sbjct 667 CGCCTGCGCAGCTTCAGCGACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCC 608 Query 7888 GAAGCTGGATTATACTACACGGGCCGCGGTGATATGACAAAGTGTTTCTACTGTGACGGG 7947 ||||| ||||| | |||||| |||| ||||| | || ||||| |||||||||||||| Sbjct 607 GAAGCGGGATTCTTCTACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGC 548 Query 7948 GGTCTCAAAGATTGGGAGGAAAACGATATACCGTGGGAGCAACACGCGCGCTGGTTTGAT 8007 || ||||| || |||||| | |||| | ||||||||||| |||||||||||||| || Sbjct 547 GGGCTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGAC 488 Query 8008 AAATGCGCATATGTCAAACTAGTCAAAGGGGAGGAATATGTTCAGAAGGTAATTACTGAA 8067 ||||| || || | || |||||||| || || || |||||||| || || || Sbjct 487 CGGTGCGCCTACGTGCAGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAG 428 Query 8068 GCGTGCG------CCGTTTCAACGGAGC--------AAGCGCCGC--AACCGGAGAATGT 8111 ||||||| ||| | | | ||| | |||| |||| |||| || || Sbjct 427 GCGTGCGCTCTCCCCGCTCCCAAGGAACAGCCTGAGAAGC-CCGCCAAACCTACGAGTGA 369 Query 8112 TGAGTCGCCGA-AAAAATTTACA--ACACTAGAGGAGTGTAAAATTTGTTTTGAAAATAA 8168 | | | || || || || || | |||||| | | |||||||| |||| | | | Sbjct 368 T-ACT-GCTGACAATAACATAGATGACACTAAATTA-TGTAAAATCTGTTACAACGAGGA 312 Query 8169 TCGTAACGTGTGCTTTGTTCCGTGCGGACATGTGGTGGCATGCGCCAAGTGCGCTTTAAC 8228 | |||||| || || |||||||| || ||||||| || ||||| ||||| | | Sbjct 311 GAGAAACGTGGTGTTCGTGCCGTGCGGCCACCTGGTGGCCTGTGCCAAATGCGCGCTTTC 252 Query 8229 CACGAACACGTGCCCAATGTGTAGGCAGAAGTATATAAACGCTGTACGTGTTTACTATTC 8288 ||| ||| ||||| || ||| | | || || | ||| || || || |||||| || Sbjct 251 GACGGACAAATGCCCCATATGTCGACGGACGTTCACAAATGCAGTGCGGTTTTACTTGTC 192 Query 8289 TTGA 8292 ||| Sbjct 191 CTGA 188 >seq32113 Length=13445 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || |||||||||||||| || ||||| ||| | || Sbjct 7573 AGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGT 7632 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| ||||| ||||| || || || |||| || |||||||| | |||| ||| ||| Sbjct 7633 CCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCC 7692 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||| || ||||||| | | || || || | || || |||| ||| Sbjct 7693 TTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTA 7752 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||| | ||||| ||||| |||||||| Sbjct 7753 ATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 7790 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | |||||||| || |||||||| || || ||||||||||| ||||||||| Sbjct 7336 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 7395 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | || | || |||| || || || ||||| ||||| | ||||||||| | |||| Sbjct 7396 AATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGA 7455 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||| ||||| |||||| || ||| | | || || |||| || ||| Sbjct 7456 ATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCTACC 7515 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || |||||||| || | ||| || ||||| |||||||| Sbjct 7516 TCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 7562 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 || || ||||| || | ||| |||||| ||||||||||| ||||| ||| | || | Sbjct 6208 CGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCA 6267 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || |||| |||||| || || || || || || |||||||| | ||||| ||||| ||| Sbjct 6268 TCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTG 6327 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || ||||| ||| ||| | | || ||||| | || || || | ||||| Sbjct 6328 TCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTAATA 6387 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || |||| || |||||||| |||||||| Sbjct 6388 GTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 6422 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| || || || || |||||| ||||||||||||||||| | | | ||| Sbjct 6661 AGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGA 6720 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||| ||||| || ||||| || || |||||||| || | ||| | ||||||| Sbjct 6721 CCATCTTCCAATTGCTTTCCAGCAAAAATGAGGCGCTGTTGGTCTGGGGGGATGCCCTCC 6780 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || || || ||| ||| | | | || || | || || |||| ||| Sbjct 6781 TTATCTTGTATTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTA 6840 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| ||||| ||||| || ||||| Sbjct 6841 ATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 6878 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| || ||||| || || ||||||||| || ||||| ||||| || | ||| Sbjct 6889 AGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGA 6948 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| || || || |||||||| | ||||| ||||| Sbjct 6949 CCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCT 7008 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || ||||||| |||||| | | | || || | ||||||||||| || Sbjct 7009 TTATCTTGAATCTTTGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGAGTT 7068 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || ||||| || ||||| Sbjct 7069 ATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 7106 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 |||||||| || || || || || ||| | || | || |||||||| ||||| || || Sbjct 6004 TCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCGAAG 6063 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || |||||||| || | ||||| |||||||||||| ||||| || ||| Sbjct 6064 ATTAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTT 6123 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | ||||||||| | || || || || || || | ||| || || Sbjct 6124 TCGATAGTGTCGGATGGCTCCACCTCTAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACG 6183 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 6184 AAGATCTGCAT 6194 >seq16183 Length=3749 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || |||| ||| |||||||| || || | || || || || ||||| || || || Sbjct 853 CCACCCCGTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAC 912 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || |||| ||||| ||||| || ||||||| |||||||| | ||| Sbjct 913 AGCGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 972 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| |||||||| |||||| ||||| | | | || || || ||||| Sbjct 973 ATGCCTTCCTTGTCTTGTATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 1032 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || || ||||||||||| || || ||||| Sbjct 1033 TCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 1079 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || ||||| | |||| ||| | || || || ||||||||||| |||||| Sbjct 397 CCACCTCTCAGCCGTAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 456 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| || |||| || ||||| | |||| Sbjct 457 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 516 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||| || || ||| || || ||| | | | || || || ||||| Sbjct 517 ATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 576 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || |||| ||||||||||| || ||||| Sbjct 577 TCCAATGTGATAGTTTTGCCAGTCAGTGTTTTTACAAATATTTGCAT 623 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| ||||| |||||||||||||| | || | || || | |||||| || ||||| Sbjct 661 TCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAA 720 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || |||| || ||||| | ||||| ||||| || || ||| || ||| ||| Sbjct 721 ATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTT 780 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | ||| || |||| || || || || || ||||| || ||||| Sbjct 781 TCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAATGTCTTTACG 840 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 841 AAAATTTGCAT 851 >seq22628 Length=16716 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 7603 AACGGGTTTTATTATTTGGGTCGAAGAGACGAGGTGCGTTGCGCGTTTTGTAAAGTGGAA 7662 || || || |||||| |||| || | || || || || ||||||||||||||||| ||| Sbjct 16498 AATGGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 16557 Query 7663 ATCATGCGGTGGGTCGAAGGTGACGATCCGGAGAAGGACCATCGGAAGTGGGCACCGCAG 7722 || ||| ||||| | || |||||||| | |||||||| | | ||||| || ||| Sbjct 16558 ATTATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCCCAG 16617 Query 7723 TGTCCGTTTCTGCG 7736 || || || ||||| Sbjct 16618 TGCCCTTTCCTGCG 16631 >seq18661 Length=10177 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 9067 GGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTATTCACGACAAAG 9126 || || || ||| |||||| || | ||||||||| || || || || || || |||| Sbjct 517 GGGTAGAAAATTCTTTCACATATCAGTTGAGCAATTCTATCACCTTTTTTAACTGCAAAA 458 Query 9127 TCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCATCGATC 9186 ||| |||||||||||| | ||||||||| | ||| || | ||| || ||||| || Sbjct 457 TCTTCACTGGAATGATTGAATAACACCACTCCAATGTTTCCACGGTAGTCTTCATCTATG 398 Query 9187 ACACCAGC 9194 |||||||| Sbjct 397 ACACCAGC 390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380194381695132