Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq1361 145 9e-30 >seq1361 Length=62553 Score = 145 bits (160), Expect = 9e-30 Identities = 496/765 (65%), Gaps = 21/765 (3%) Strand=Plus/Plus Query 153310 CAACGAGAACGCGAACAAAGACGCAAGGGTATTCCCTACACAGCGCGATCTGCTGGCTGG 153369 ||| || || ||||||||||| | |||||| ||| ||||| || || ||||| Sbjct 32053 CAATGAAAATGCGAACAAAGATAGTAATGTATTCAATACGCAGCGTGACTTGACTGCTGG 32112 Query 153370 TATCGTAGCGAAACACTTCGCACGTAACCACATT-CTGCCAAAACACATTGTAGAAGCGC 153428 ||||| | |||| ||| || | | ||| || ||| || |||| | || | Sbjct 32113 CATCGTTGGGAAA----TCGATCGGATTGAAATTACTTCCACCGCATATTGCCAACGCCC 32168 Query 153429 ATGATTCTGGTGATATCCATTATCATGATCTGGATTACAGCCCGTTCACGCCATACACAA 153488 || | || |||||||||||||||||||| |||||| |||| || ||| |||| Sbjct 32169 ATCAAAAAGGCGATATCCATTATCATGATCTCGATTACCATCCGTATACACCAATGACAA 32228 Query 153489 ACTGCTGTCTGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAG 153548 | |||||| || | || || ||||||||| || || || || || || || || |||| Sbjct 32229 ATTGCTGTTTGATCGACTTCAAAGGTATGTTGAACAACGGGTTTAAAATTGGAAATGCAG 32288 Query 153549 ACATCGAACCCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCAC 153608 | ||||| | || ||||| ||| || || || | || ||||||||| || Sbjct 32289 AAGTCGAATCACCAAAATCGATCCAAACAGCAACGGCACAGATTTCACAGATCATTGCCA 32348 Query 153609 AGATTGCCTCTCACCAGTACGGCGGGACAACCTTTGC---TAACGTTGATAAAGTGCTGG 153665 | |||| ||| ||| || ||||| | | ||| | | ||| || |||| | Sbjct 32349 ATGTTGCATCTAGCCAATATGGCGG---ATGTTCTGCCGATCGCACAGATGAATTGCTTG 32405 Query 153666 CTCCATATGTTCAAATGACATATGATAAGCACTTTAAAGATGCCAA--AAAGTATCAAAT 153723 |||| | || ||| | | || | || || || | |||||||| || | ||| | Sbjct 32406 CTCCTTTTGCACAATTAAATTACAAAAAACATTTAATTGATGCCAAAGAATGGATCGACA 32465 Query 153724 CCCTCGTGATGTTCAG-----TATGCAATAGATAAAACTGAAAAGGATGTTTTCGACGCG 153778 | | || | | || ||||||| || ||||| |||| ||| |||| || || Sbjct 32466 CACCCG-AACGGCAAGAAGCCTATGCAAAAGCAAAAACCAAAAAAGATATTTTTGATGCC 32524 Query 153779 TTTCAGTCATATGAATACGAAGTAAACACCCTGCATACTGCGAACGGTCAAACCCCGTTT 153838 | || | ||||| || | || || || ||| | ||||| ||||| || ||| Sbjct 32525 ATGCAAAGTTTGGAATATGAGATCAATACACTTTTCACTTCCAACGGACAAACGCCTTTT 32584 Query 153839 GTTACAATTACGTTCGGTACTGGTCAATCCCGATGTGAACGCATGATCCAGAAAGCGATT 153898 | || | |||||| ||| || | | |||||| ||||| ||||||||| Sbjct 32585 ACTTCACTCGGCTTCGGTCTAGGTAAAAATTGGTTTGAACGAGAAATCCAAAAAGCGATT 32644 Query 153899 CTGAAAAACCGTATTCGCGGCCTGGGTAAAGAGGGTATCACTCCGGTATTCCCGAAACTG 153958 | ||| ||| || || | || | ||| || || | ||||| ||| | Sbjct 32645 TTACAAATCCGAATCAATGGATTAGGCAGTGAGAAACGGACAGCGATCTTCCC-AAAATT 32703 Query 153959 GTTATGTTCA-TGGAAAAAGGAATCAACCTTGATCCAGAGGATCGCAACTATGACATCAA 154017 | ||| | || | || | |||||||| ||| | ||| |||| |||||||||||||| Sbjct 32704 GATATTTACACTAAAAGACGGAATCAATCTTAAACCAACTGATCCAAACTATGACATCAA 32763 Query 154018 ACAACTTGCCCTGGAATGTGCTTCTAAACGCATGTACCCAGATAT 154062 |||| | ||| | |||||||| | ||| | |||||||||||||| Sbjct 32764 ACAATTAGCCTTAGAATGTGCCACAAAAAGAATGTACCCAGATAT 32808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568948822205920