Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_019418.1 Length=37282 Score E Sequences producing significant alignments: (Bits) Value seq1464 149 1e-31 seq3145 123 6e-24 seq1539 120 7e-23 >seq1464 Length=66918 Score = 149 bits (164), Expect = 1e-31 Identities = 236/336 (70%), Gaps = 8/336 (2%) Strand=Plus/Minus Query 29404 CGACTTTCCAACAATTGAAAACTACTTGCAATAACCTCTGTCACATACACGCGCTGTCCT 29463 ||||||||||| ||||| || | |||| || ||||| || ||||| || |||||| Sbjct 18170 CGACTTTCCAATAATTGGAAGTTTTCAGCAACTACTTCTGTTACGTACACACGTTGTCCT 18111 Query 29464 TGTTGATTGTCATAGTAGCGTGTTTGAATGTTGCCTGTAATACCAATCAATGCGCCTTTC 29523 |||||||| ||||| | || |||||||| || || | ||| | | | ||||| Sbjct 18110 TGTTGATTATCATAAGAACGCGTTTGAATACGACCAGTTACACCTAAAAGAGTTCCTTTA 18051 Query 29524 TTAGCCCAATTAGCAAGATTTTCTGCCGCTTGTCTCCAAATAACACAATTAATAAAATCA 29583 | || | || || || ||||||| | || || |||||| ||||||||||||||||| Sbjct 18050 TGTGCATAGTTTGCTAGTGTTTCTGCTGATTTTCGCCAAATCACACAATTAATAAAATCC 17991 Query 29584 GCCTCACGCTCTCCATTTTCATTTTTGAATGGGCGATTTACTGCAAGGGTAAAAGTGGCA 29643 |||||||| | || |||| | |||| ||||| || || | || || || || Sbjct 17990 GCCTCACGGTTGCCGTTTTGGCTCGTGAAGTTACGATTGACAGCTAAAGTGAACGTTGCT 17931 Query 29644 ACTGCA---ACATTTGATGGTGTATATCTTAATTCAGCATCTCTAGTCAGTCGCCCTACT 29700 || ||| || |||| |||||||| ||| || | |||| | ||||| || || ||| Sbjct 17930 ACAGCAGTGCCACTTGA---TGTATATCGTAAATCTGGATCTTTTGTCAGACGTCCAACT 17874 Query 29701 AAAATAACGTTATTTATCATCCTG--CACCTCCTCT 29734 | | ||||||||| |||| || || ||||||| Sbjct 17873 AGTACAACGTTATTAATCAAAATGGTCATCTCCTCT 17838 >seq3145 Length=45091 Score = 123 bits (136), Expect = 6e-24 Identities = 218/315 (69%), Gaps = 6/315 (2%) Strand=Plus/Minus Query 29409 TTCCAACAATTGAAAACTACTTGCAATAACCTCTGTCACATACACGCGCTGTCCTTGTTG 29468 |||||||||||||||| | ||| | ||| || || ||||| || || || ||||| || Sbjct 2105 TTCCAACAATTGAAAATTCTCTGCTACAACTTCCGTTACATAAACACGTTGCCCTTGCTG 2046 Query 29469 ATTGTCATAGTAGCGTGTTTGAATGTTGCCTGTAATACCAATCAATGCGCCTTTCTTAGC 29528 ||||||||| | ||||||||||| || || | || | ||| | || | ||| Sbjct 2045 ATTGTCATAAGAACGTGTTTGAATTCGTCCGGTCACGCCTAGCAAGGTTCCCCTGCGAGC 1986 Query 29529 CCAATTAGCAAGATTTTCTGCCGCTTGTCTCCAAATAACACAATTAATAAAATCAGCCTC 29588 ||||||| || |||| || | || |||||||| ||||| | || || || || || Sbjct 1985 ATAATTAGCCAGTGTTTCCGCTGGTTTCCTCCAAATCACACATTGAACGAAGTCTGCTTC 1926 Query 29589 ACGCTCTCCATTTTCATTTTTGAATGGGCGATTTACTGCAAGGGTAAAAGTGGCAACTGC 29648 ||||||||| || ||| | || ||||| |||||||||||||| || || | | Sbjct 1925 ACGCTCTCCGGCTTGATTGGTAAAGTTTCGATTAACTGCAAGGGTAAATGTAGCCA---C 1869 Query 29649 AACATTT-GATGG--TGTATATCTTAATTCAGCATCTCTAGTCAGTCGCCCTACTAAAAT 29705 | | ||| | | ||||| | || |||| ||| | || | || ||||||||| | Sbjct 1868 ACCTTTTCCACCGCTCGTATAGCGCAAATCAGGGTCTTTCGTTAAACGTCCTACTAAAGT 1809 Query 29706 AACGTTATTTATCAT 29720 || || || ||||| Sbjct 1808 CACATTGTTAATCAT 1794 >seq1539 Length=57711 Score = 120 bits (132), Expect = 7e-23 Identities = 218/318 (69%), Gaps = 6/318 (2%) Strand=Plus/Plus Query 29406 ACTTTCCAACAATTGAAAACTACTTGCAATAACCTCTGTCACATACACGCGCTGTCCTTG 29465 |||||| || | ||| ||| || || | ||| || ||||| || || ||||||||||| Sbjct 15859 ACTTTCTAATAGTTGGAAATTATCGGCCACAACTTCAGTCACGTAGACACGCTGTCCTTG 15918 Query 29466 TTGATTGTCATAGTAGCGTGTTTGAATGTTGCCTGTAATACCAATCAATGCGCCTTTCTT 29525 || |||||||| || |||||||| || | || || || || || || Sbjct 15919 CTGGTTGTCATAAGTCCGCGTTTGAATCCGTCCGACGACGCCGATTAAACTACCCTTTTT 15978 Query 29526 AGCCCAATTAGCAAGATTTTCTGCCGCTTGTCTCCAAATAACACAATTAATAAAATCAGC 29585 ||| | |||| | |||| || | || | |||||| |||||||| ||||||||||| Sbjct 15979 AGCTAATGTAGCCATCGTTTCCGCTGGTTTACGCCAAATCACACAATTGATAAAATCAGC 16038 Query 29586 CTCACGCTCTCCATTTTCATTTTTGAATGGGCGATTTACTGCAAGGGTAAAAGTGGCAAC 29645 || || | || |||| ||| | || |||||| || || | |||||||||||| || Sbjct 16039 TTCTCGATTGCCGTTTTGATTCGTAAAATTGCGATTAACGGCTAAGGTAAAAGTGGCCAC 16098 Query 29646 TGC---AACATTTGATGGTGTATATCTTAATTCAGCATCTCTAGTCAGTCGCCCTACTAA 29702 ||| || | || ||||| | ||| || | |||| | || | || |||||||| Sbjct 16099 TGCTGTGCCACT---TGCGGTATAACGTAAATCGGGATCTTTGGTTAACCGTCCTACTAA 16155 Query 29703 AATAACGTTATTTATCAT 29720 | | || ||||| ||||| Sbjct 16156 AGTTACATTATTGATCAT 16173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118954237597152