Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_019421.1 Length=48396 Score E Sequences producing significant alignments: (Bits) Value seq14859 233 6e-57 >seq14859 Length=68005 Score = 233 bits (258), Expect = 6e-57 Identities = 406/582 (70%), Gaps = 20/582 (3%) Strand=Plus/Plus Query 902 TGGTCAAGGAGTAGGTAAAACTGGATTAGAAAGCATT-GCAACTGTATGGTATTTAAGCA 960 ||| ||||| || || ||||| | ||||||| ||| |||| | |||| ||||| Sbjct 29701 TGGACAAGGTGTTGGGAAAACAGCATTAGAA-GCAGGAGCAATACTTTGGTTTTTAACTT 29759 Query 961 CTAGACCTTTTCCGAAAGTAGTTGCTACAGCTCCAAC-ACGACAACAATTATATGACGTA 1019 | |||| | | ||||| |||||||||| ||||| | || ||||| | || || ||| Sbjct 29760 GTCGACCATACGCTAAAGTGATTGCTACAGCGCCAACCATGA-AACAACTTTACGATGTA 29818 Query 1020 CTATGGGCTGAAATAGCTAAATGGCTAAGTAATAGCAAGGTTGAGAAGCTACTTGAGTGG 1079 || ||||| ||| ||||||||||| ||| | ||||| | | | || |||| ||||| Sbjct 29819 CTTTGGGCGGAAGTAGCTAAATGGTTAAATGATAGCTTGATCAAAAACTTACTGAAGTGG 29878 Query 1080 ACTAAAACAAAAGTGTATATGAAAGGCTTTGAAGAAAGATGGTGGGCTACAGCTAGAACA 1139 || || || ||| | |||||| || | || | |||| ||||||||||||||| Sbjct 29879 ACAAAGACCAAAATTTATATGGTTGGTGATTCTGAGCGTTGGTTTGCTACAGCTAGAACA 29938 Query 1140 GCAGTAAAGCCCGAGAATATGCAAGGTTTTCATGAAGATTATATGTTATTTGTTGTTGAT 1199 ||| ||||| || ||||||||||| ||||||||||| ||||||| ||||||| ||| Sbjct 29939 GCAACGAAGCCAGAAAATATGCAAGGGTTTCATGAAGACCATATGTTGATTGTTGTAGAT 29998 Query 1200 GAAGCTTCGGGAGTTGCTGACCCCATTATGGAAGCTATATTGGGAACATTATCAGGTGCA 1259 |||||||| || || |||| || |||||||||||||| | || || |||||||| Sbjct 29999 GAAGCTTCTGGTGTATCTGATCCAATTATGGAAGCTATTCTTGGTACGCTATCAGGTTTT 30058 Query 1260 GAAAATAAGCTTCTTTTATGCGGAAACCCAACTAGAACGAGTGGAACG----TTTTACGA 1315 || |||||||| | | || || ||||||| || | | ||| | |||||||| Sbjct 30059 GATAATAAGCTATTGATGTGTGGGAACCCAAATAATA----TTGAAGGTGTCTTTTACGA 30114 Query 1316 TAGCCATAATAGAGACAGAGATTTATATAAAACATTTAAAGTATCTTCTTTAGATAGCCC 1375 | ||| ||| |||| | ||| ||| | | |||||||||| || ||||| Sbjct 30115 TTCCCACAATTCAGACCGTGATAAATACAGAGTTCATAAAGTATCTAGTTACGATAGTAA 30174 Query 1376 TAGAACATCAAAAGATAATATTGAAATG----CTAAAAAGAAAGTACCATGAAGGTTCTG 1431 | ||| ||||| || || |||||| ||||||| | | | | ||| | || Sbjct 30175 ACGCACAAACAAAGACAACATAGAAATGATTCTTAAAAAGTATGGA-AAAGAAAGCGATG 30233 Query 1432 ACCCTTGGCGTGTTAGAGTTCTTGGAGAATTTCCAAAAGGTG 1473 || ||||| | || ||||||||||||| ||||||| Sbjct 30234 TTGCT---CGTGTCCGTATTTTTGGAGAATTTCCTAAAGGTG 30272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154451429001264