Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_019515.1
Length=93839
Score E
Sequences producing significant alignments: (Bits) Value
seq9304 96.9 2e-15
seq2007 82.4 5e-11
>seq9304
Length=29499
Score = 96.9 bits (106), Expect = 2e-15
Identities = 231/346 (67%), Gaps = 5/346 (1%)
Strand=Plus/Plus
Query 22842 TGGAAGATATTTAAGTAAGTTGCTCCTGCACCTTTTCGCTGTCCTAATTGGTTTGCGTAA 22901
||||||| ||||| ||| | || ||||||| || |||||||||||||| | |||
Sbjct 6551 TGGAAGACGTTTAAATAAACGACACCCGCACCTTGACGTTGTCCTAATTGGTTCGAATAA 6610
Query 22902 GAGAATGCATCTTCTAATAACTTCATTACTGGAACAATACCGCTACTTGCTCCCTCGATT 22961
|| |||||| || || ||||| |||||||||| ||||||| ||| || ||| |
Sbjct 6611 CTAAAGCTATCTTCAAACAATTTCATGACTGGAACAACACCGCTAGCTGCACCTTCGTAT 6670
Query 22962 TCTTTAATCGGGTCTGAAGTAGCTCTTATTTTAGATAAGTTTAAT-GCTACTCCACCGCC 23020
|||| ||||| || | | | || ||||| |||| | || | || ||||| ||
Sbjct 6671 CCTTTGATCGGCGCTCCGGCTTCACGTAAGTTAGA-AAGTGTGATCCCAACACCACCACC 6729
Query 23021 AATTTTCGATAACTGCATTGCTTTGTTAATTGCAAATCCAATTCCGTTTAAATCGTCCCC 23080
||| || | || | || ||| || | | || ||| || | ||| |||
Sbjct 6730 GATTCGTGAAAGTTGTAAGGCAGAGTTGATCGAACGACCGATTGAATTCATATCATCCGT 6789
Query 23081 AACTTCAGTAAGGAAGCATGATACTAATTCACCACGTCTTGCTTTTCCACTATTTAAGAA 23140
|||| ||| | ||| || || || | ||||||||| | | |||| ||| || ||
Sbjct 6790 TACTTGAGTCAAGAAACAAGAAACAAGTTCACCACGACGTTTACGTCCAGCATTCAAAAA 6849
Query 23141 GGTAGGCGTTGCGGGTTGATATAGTTGTTTTCCGATAATTTCAGCA 23186
| ||| ||||| |||||||| |||| | ||| |||||| ||
Sbjct 6850 TGAAGGGGTTGCTGGTTGATAACGTTGGT---GGATCATTTCATCA 6892
>seq2007
Length=108395
Score = 82.4 bits (90), Expect = 5e-11
Identities = 150/219 (68%), Gaps = 3/219 (1%)
Strand=Plus/Minus
Query 78366 TGATTCTTGTAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTACTTCCAGTCCG 78425
||||| ||||| ||| || || || | || || || || || || ||||| | |||
Sbjct 94833 TGATTTGAGTAAAGATGCGCATCGCCTAAAGTATGGATAAATTCACCAACTTCTAATCCC 94774
Query 78426 CACAAATGCGCAATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAATTCCT 78485
||| ||||| | |||||| | ||| || || |||||| || || || | |||
Sbjct 94773 GTTTCATGTGCAATCAGATGTGTCAATAAAGCATAGCTAGCAATATTGAACGGGACACCT 94714
Query 78486 AAGAATACGTCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCATCAACTGATACG 78545
|| || |||||| | |||| ||| |||| ||||||||||| || || | |||
Sbjct 94713 AAAAACACGTCAGCACTTCTTTGATACAGCTGGCAACTTAGTTT---ATTGTCATTTACA 94657
Query 78546 TAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGCCATA 78584
|| || || || | ||||| ||||| |||| ||||||
Sbjct 94656 TAGAATTGAAACATCGTGTGGCAAGGAGGTAAAGCCATA 94618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 299574380711200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |