Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq9304 96.9 2e-15 seq2007 82.4 5e-11 >seq9304 Length=29499 Score = 96.9 bits (106), Expect = 2e-15 Identities = 231/346 (67%), Gaps = 5/346 (1%) Strand=Plus/Plus Query 22842 TGGAAGATATTTAAGTAAGTTGCTCCTGCACCTTTTCGCTGTCCTAATTGGTTTGCGTAA 22901 ||||||| ||||| ||| | || ||||||| || |||||||||||||| | ||| Sbjct 6551 TGGAAGACGTTTAAATAAACGACACCCGCACCTTGACGTTGTCCTAATTGGTTCGAATAA 6610 Query 22902 GAGAATGCATCTTCTAATAACTTCATTACTGGAACAATACCGCTACTTGCTCCCTCGATT 22961 || |||||| || || ||||| |||||||||| ||||||| ||| || ||| | Sbjct 6611 CTAAAGCTATCTTCAAACAATTTCATGACTGGAACAACACCGCTAGCTGCACCTTCGTAT 6670 Query 22962 TCTTTAATCGGGTCTGAAGTAGCTCTTATTTTAGATAAGTTTAAT-GCTACTCCACCGCC 23020 |||| ||||| || | | | || ||||| |||| | || | || ||||| || Sbjct 6671 CCTTTGATCGGCGCTCCGGCTTCACGTAAGTTAGA-AAGTGTGATCCCAACACCACCACC 6729 Query 23021 AATTTTCGATAACTGCATTGCTTTGTTAATTGCAAATCCAATTCCGTTTAAATCGTCCCC 23080 ||| || | || | || ||| || | | || ||| || | ||| ||| Sbjct 6730 GATTCGTGAAAGTTGTAAGGCAGAGTTGATCGAACGACCGATTGAATTCATATCATCCGT 6789 Query 23081 AACTTCAGTAAGGAAGCATGATACTAATTCACCACGTCTTGCTTTTCCACTATTTAAGAA 23140 |||| ||| | ||| || || || | ||||||||| | | |||| ||| || || Sbjct 6790 TACTTGAGTCAAGAAACAAGAAACAAGTTCACCACGACGTTTACGTCCAGCATTCAAAAA 6849 Query 23141 GGTAGGCGTTGCGGGTTGATATAGTTGTTTTCCGATAATTTCAGCA 23186 | ||| ||||| |||||||| |||| | ||| |||||| || Sbjct 6850 TGAAGGGGTTGCTGGTTGATAACGTTGGT---GGATCATTTCATCA 6892 >seq2007 Length=108395 Score = 82.4 bits (90), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 78366 TGATTCTTGTAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTACTTCCAGTCCG 78425 ||||| ||||| ||| || || || | || || || || || || ||||| | ||| Sbjct 94833 TGATTTGAGTAAAGATGCGCATCGCCTAAAGTATGGATAAATTCACCAACTTCTAATCCC 94774 Query 78426 CACAAATGCGCAATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAATTCCT 78485 ||| ||||| | |||||| | ||| || || |||||| || || || | ||| Sbjct 94773 GTTTCATGTGCAATCAGATGTGTCAATAAAGCATAGCTAGCAATATTGAACGGGACACCT 94714 Query 78486 AAGAATACGTCACCGCTTCGTTGGTACAATTGGCAACTTAGCTTTCCATCAACTGATACG 78545 || || |||||| | |||| ||| |||| ||||||||||| || || | ||| Sbjct 94713 AAAAACACGTCAGCACTTCTTTGATACAGCTGGCAACTTAGTTT---ATTGTCATTTACA 94657 Query 78546 TAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGCCATA 78584 || || || || | ||||| ||||| |||| |||||| Sbjct 94656 TAGAATTGAAACATCGTGTGGCAAGGAGGTAAAGCCATA 94618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299574380711200