Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq27585 118 1e-21 seq1616 111 2e-19 >seq27585 Length=18814 Score = 118 bits (130), Expect = 1e-21 Identities = 168/234 (72%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 173248 CAGGTGTTTTACCAGTAATGAAAATCCTTGAAGATGCTTTTTCATATGCTAATCAATTAG 173307 |||| ||| | ||||| |||||||| ||||||||| | |||||||||||||||||| ||| Sbjct 5351 CAGGCGTTATCCCAGTTATGAAAATTCTTGAAGATTCATTTTCATATGCTAATCAACTAG 5410 Query 173308 GACAACGTCCAGGTGCTGGAGCTGCTTATATCAATATCTTCCATTCAGATGTTGAAGAAT 173367 | ||| | | ||||||||| || | |||| | ||| | ||| ||||| || || Sbjct 5411 GTCAAAGACAAGGTGCTGGGGCAGTTTATTTAAATGTTCATCATCCAGATATTATGTTAT 5470 Query 173368 TTCTAGATTCTAA----GAAAATCAACGCTGACGAAAAATCACGTCTTAAATCGCTTTCG 173423 || ||||||| || |||||| || || |||||| ||| ||||||| | || Sbjct 5471 TTTTAGATTCAAAGCGTGAAAAT----GCAGATGAAAAAATTCGTATTAAATCAATGTCT 5526 Query 173424 TTAGGTGTTATCGTTCCTGACA--AATTCATGGAATTAGCTGAGAAGGATGAAC 173475 ||||| || || |||| || | | || | |||||||| | || |||||| Sbjct 5527 TTAGGAGTAATTATTCCCGATATTACTT--TTGAATTAGCAAAAAACAATGAAC 5578 >seq1616 Length=186323 Score = 111 bits (122), Expect = 2e-19 Identities = 432/665 (65%), Gaps = 28/665 (4%) Strand=Plus/Minus Query 139499 TCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACAACTCTT 139558 ||||||||| | | || || ||||||||||||||||| || |||||| || | | | | Sbjct 92152 TCGAAACAGCTGATGCCAGTCTACGATAAACCAATGATCTATTATCCAATGTCTATTTTG 92093 Query 139559 ATCGAAGCTGGTATAAACGAAATACTTATAATATCAACACCACAGGATA-GAAATTCTTT 139617 || || ||||| || || ||| | || || |||||||| || |||| | |||| Sbjct 92092 ATGTTGGCAGGTATCAAGGAGATATTGATTATTTCAACACCTCAAGATACCCCACGCTTT 92033 Query 139618 CGAGAACTTACTAGGTAACGGTTCACAAT-TTGGTGTTAGAATAGAATACGCTGTTCAAG 139676 |||| ||| | || || || || || | ||| || | ||||| || ||||||| Sbjct 92032 AAAGAA-TTATTTGGAAATGG-GCATGATCTAGGTATTCACCTTGAATATGCGGTTCAAG 91975 Query 139677 AAAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATAGGTAAATCTA 139736 | | || |||| ||||| |||||||| | || || |||||||| || || | || Sbjct 91974 AGAGGCCCGATGGCTTAGCTCAAGCTTTTATCATTGGGGAAGAATTTATTGGCGATGATA 91915 Query 139737 AAGTAGCTCTGATTTTAGGTGACAACATTTTCCATGCT--TCTAATATAGATAGATTACT 139794 || ||| ||||||| || || || | | ||| | | ||| | | | Sbjct 91914 GTGTTTGTCTTGTTTTAGGAGATAATATCTACTATGGTGGCGGACTAT-----CAAAAAT 91860 Query 139795 TATGGAAGCTAATATGTCT-GATAA-----AAATACGATATTTGCATATCGTGTAAATGA 139848 || || | | ||| || || | || | || | ||||| ||| ||||| Sbjct 91859 GTTGCAACGTGCTGCCTCTAGAGAAAGTGGAGCGACTGTTTTCGGATATCATGTTAATGA 91800 Query 139849 TCCTCAGAGATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGTTTCGATCGAAGA 139908 ||| | | | |||||| || ||||| |||||| || | ||| | || || ||||| Sbjct 91799 TCCGGAACGTTTTGGTGTGGTCGAATTTGATGAAAATATGCAAGCTCTCTCTATTGAAGA 91740 Query 139909 AAAACCTTTGAATCCTAAATCTAATTACGCAGTACCAGGCTTATATTTCTATAATAACGA 139968 ||||| | || ||||| ||||| || || |||| | |||||||| | ||||| Sbjct 91739 GAAACCAACAGAACCAAAATCAAATTATGCTGTCACAGGACTTTATTTCTACGACAACGA 91680 Query 139969 TGTTATCGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGAATACGAAATATCAGA 140028 ||| || | | || || |||||||| || | ||||| ||| || || | || Sbjct 91679 TGTGATTTCAATTGCAAAAGAAATCAAACCATCTGAGCGTGGCGAACTAGAGATCACTGA 91620 Query 140029 TATTAAC---GCATATTACTTAGATAAGA-ATCAATTATCAGTTAAAGCTTTTGACAGAA 140084 | ||| |||||| ||||| |||| || | || | || || || || || Sbjct 91619 CGTCAACAAAGCATAT---TTAGA-AAGAGGAAAACTTTCTG-TAGAGATTATG--GGAC 91567 Query 140085 GTGGTACTACATGGTTAGATACTGGTACTATTCAGTCTTTAGCTGAAGCTTCTTTATTTG 140144 ||||| | | ||||||||||| || || | | |||||| |||||| ||| |||| Sbjct 91566 GTGGTTTTGCTTGGTTAGATACAGGCACGCATGAATCTTTACTTGAAGCCTCTACATTTA 91507 Query 140145 TTGAA 140149 ||||| Sbjct 91506 TTGAA 91502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700457938244480