Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16]
160,084 sequences; 259,837,422 total letters
Query= NC_019521.1
Length=219372
Score E
Sequences producing significant alignments: (Bits) Value
seq27585 118 1e-21
seq1616 111 2e-19
>seq27585
Length=18814
Score = 118 bits (130), Expect = 1e-21
Identities = 168/234 (72%), Gaps = 12/234 (5%)
Strand=Plus/Plus
Query 173248 CAGGTGTTTTACCAGTAATGAAAATCCTTGAAGATGCTTTTTCATATGCTAATCAATTAG 173307
|||| ||| | ||||| |||||||| ||||||||| | |||||||||||||||||| |||
Sbjct 5351 CAGGCGTTATCCCAGTTATGAAAATTCTTGAAGATTCATTTTCATATGCTAATCAACTAG 5410
Query 173308 GACAACGTCCAGGTGCTGGAGCTGCTTATATCAATATCTTCCATTCAGATGTTGAAGAAT 173367
| ||| | | ||||||||| || | |||| | ||| | ||| ||||| || ||
Sbjct 5411 GTCAAAGACAAGGTGCTGGGGCAGTTTATTTAAATGTTCATCATCCAGATATTATGTTAT 5470
Query 173368 TTCTAGATTCTAA----GAAAATCAACGCTGACGAAAAATCACGTCTTAAATCGCTTTCG 173423
|| ||||||| || |||||| || || |||||| ||| ||||||| | ||
Sbjct 5471 TTTTAGATTCAAAGCGTGAAAAT----GCAGATGAAAAAATTCGTATTAAATCAATGTCT 5526
Query 173424 TTAGGTGTTATCGTTCCTGACA--AATTCATGGAATTAGCTGAGAAGGATGAAC 173475
||||| || || |||| || | | || | |||||||| | || ||||||
Sbjct 5527 TTAGGAGTAATTATTCCCGATATTACTT--TTGAATTAGCAAAAAACAATGAAC 5578
>seq1616
Length=186323
Score = 111 bits (122), Expect = 2e-19
Identities = 432/665 (65%), Gaps = 28/665 (4%)
Strand=Plus/Minus
Query 139499 TCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACAACTCTT 139558
||||||||| | | || || ||||||||||||||||| || |||||| || | | | |
Sbjct 92152 TCGAAACAGCTGATGCCAGTCTACGATAAACCAATGATCTATTATCCAATGTCTATTTTG 92093
Query 139559 ATCGAAGCTGGTATAAACGAAATACTTATAATATCAACACCACAGGATA-GAAATTCTTT 139617
|| || ||||| || || ||| | || || |||||||| || |||| | ||||
Sbjct 92092 ATGTTGGCAGGTATCAAGGAGATATTGATTATTTCAACACCTCAAGATACCCCACGCTTT 92033
Query 139618 CGAGAACTTACTAGGTAACGGTTCACAAT-TTGGTGTTAGAATAGAATACGCTGTTCAAG 139676
|||| ||| | || || || || || | ||| || | ||||| || |||||||
Sbjct 92032 AAAGAA-TTATTTGGAAATGG-GCATGATCTAGGTATTCACCTTGAATATGCGGTTCAAG 91975
Query 139677 AAAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATAGGTAAATCTA 139736
| | || |||| ||||| |||||||| | || || |||||||| || || | ||
Sbjct 91974 AGAGGCCCGATGGCTTAGCTCAAGCTTTTATCATTGGGGAAGAATTTATTGGCGATGATA 91915
Query 139737 AAGTAGCTCTGATTTTAGGTGACAACATTTTCCATGCT--TCTAATATAGATAGATTACT 139794
|| ||| ||||||| || || || | | ||| | | ||| | | |
Sbjct 91914 GTGTTTGTCTTGTTTTAGGAGATAATATCTACTATGGTGGCGGACTAT-----CAAAAAT 91860
Query 139795 TATGGAAGCTAATATGTCT-GATAA-----AAATACGATATTTGCATATCGTGTAAATGA 139848
|| || | | ||| || || | || | || | ||||| ||| |||||
Sbjct 91859 GTTGCAACGTGCTGCCTCTAGAGAAAGTGGAGCGACTGTTTTCGGATATCATGTTAATGA 91800
Query 139849 TCCTCAGAGATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGTTTCGATCGAAGA 139908
||| | | | |||||| || ||||| |||||| || | ||| | || || |||||
Sbjct 91799 TCCGGAACGTTTTGGTGTGGTCGAATTTGATGAAAATATGCAAGCTCTCTCTATTGAAGA 91740
Query 139909 AAAACCTTTGAATCCTAAATCTAATTACGCAGTACCAGGCTTATATTTCTATAATAACGA 139968
||||| | || ||||| ||||| || || |||| | |||||||| | |||||
Sbjct 91739 GAAACCAACAGAACCAAAATCAAATTATGCTGTCACAGGACTTTATTTCTACGACAACGA 91680
Query 139969 TGTTATCGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGAATACGAAATATCAGA 140028
||| || | | || || |||||||| || | ||||| ||| || || | ||
Sbjct 91679 TGTGATTTCAATTGCAAAAGAAATCAAACCATCTGAGCGTGGCGAACTAGAGATCACTGA 91620
Query 140029 TATTAAC---GCATATTACTTAGATAAGA-ATCAATTATCAGTTAAAGCTTTTGACAGAA 140084
| ||| |||||| ||||| |||| || | || | || || || || ||
Sbjct 91619 CGTCAACAAAGCATAT---TTAGA-AAGAGGAAAACTTTCTG-TAGAGATTATG--GGAC 91567
Query 140085 GTGGTACTACATGGTTAGATACTGGTACTATTCAGTCTTTAGCTGAAGCTTCTTTATTTG 140144
||||| | | ||||||||||| || || | | |||||| |||||| ||| ||||
Sbjct 91566 GTGGTTTTGCTTGGTTAGATACAGGCACGCATGAATCTTTACTTGAAGCCTCTACATTTA 91507
Query 140145 TTGAA 140149
|||||
Sbjct 91506 TTGAA 91502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 700457938244480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |