Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq32201 102 2e-16 seq1616 100 6e-16 >seq32201 Length=7522 Score = 102 bits (112), Expect = 2e-16 Identities = 177/253 (70%), Gaps = 6/253 (2%) Strand=Plus/Minus Query 48484 TAACTGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAAAG 48543 ||| |||||| | |||| || ||||| || |||||||| | ||| |||||||| Sbjct 6641 TAATTGCTGGCGCTAAATTCCAAGGTGAGTTTGAAGAACGATTAAAAGCGGTTATTAAAC 6582 Query 48544 AACTTAAAAAA-CGA--GAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGATGG 48600 || ||||||| | | | ||| | ||||| || ||||||||| ||||| | || | | Sbjct 6581 AAATTAAAAATTCTAATGGAAAAATTATTTTATTTATTGATGAACTACATTTAATTGTTG 6522 Query 48601 GTGCTGGTGGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTT 48660 |||||||| | | || | || || |||||| ||| | | ||||| | Sbjct 6521 GTGCTGGTAGAA-CACAA--GGTTCAATGGATGCTTCTAATTTACTAAAACCAATGTTAG 6465 Query 48661 CACGTGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTG 48720 |||||||||| | ||| ||| ||||| ||||| ||| |||||||| || |||||| Sbjct 6464 CACGTGGTGAACTACGTTGTATTGGTGCCACAACACTTGACGAATATCGTCAATACATTG 6405 Query 48721 AAAAAGATGCTGC 48733 |||||||||| || Sbjct 6404 AAAAAGATGCAGC 6392 >seq1616 Length=186323 Score = 100 bits (110), Expect = 6e-16 Identities = 217/321 (68%), Gaps = 14/321 (4%) Strand=Plus/Plus Query 49185 GGTGCTTTCATGTTTGTTGGACCATCTGGTACTGGTAAAACTGAAATCACAAAAGCACTT 49244 ||| ||||| | |||||||| || ||||| ||||||||| ||| | | || ||| Sbjct 31097 GGTTCTTTCTTATTTGTTGGTCCTACTGGTGTTGGTAAAACAGAATTAGCGAAGCAACTA 31156 Query 49245 GC---TGAAGCAATGGGTTCTGA------GCTAATTCGTTTTGATATGTCAGAGTTTTCG 49295 || |||| | | || ||||| | | || ||||| ||||||||||| | | Sbjct 31157 GCCTATGAATTATTTGGATCTGAAGAATCGATGATCCGTTTCGATATGTCAGAATACATG 31216 Query 49296 CAAGACCACACTGTATCTAAACTTATTGGTTCACCTCCTGGATATGTAGGACATGAAACA 49355 || | |||| ||| | ||| | |||||||| ||||| || ||||| || ||||| | Sbjct 31217 GAAAAACACAGTGTCGCAAAATTGATTGGTTCCCCTCCAGGCTATGTCGGCTATGAAGAA 31276 Query 49356 GGCAATGGTCAGCTTCTTGATAAAGTTGAAC-AATTCCCTAATGCAGTACTTCTACTGGA 49414 | |||||| | ||| ||||| | || ||| || | | |||| || || Sbjct 31277 GC---TGGTCAATTGACTGAAAAAGTACGTCGAAATCCGTATAGTT-TGGTTCTGCTTGA 31332 Query 49415 TGAAATTGAAAAAGCACATCCAAAAGTACTGCTGACATTCCTACAAGTATTGGATGAAGG 49474 |||| | ||||||||||||||| | || ||| | |||||||| | || ||||| || Sbjct 31333 TGAAGTAGAAAAAGCACATCCAGATGTCTTGCACATGTTCCTACAGATCTTAGATGATGG 31392 Query 49475 GCGTTTGACTGGTTCACAAGG 49495 ||||| || | | | ||||| Sbjct 31393 ACGTTTAACCGATGCGCAAGG 31413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1104188171095008