Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_019529.1 Length=111506 Score E Sequences producing significant alignments: (Bits) Value seq1361 98.7 7e-16 >seq1361 Length=62553 Score = 98.7 bits (108), Expect = 7e-16 Identities = 210/314 (67%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 27842 TTCCCTAAGCTAGTATTTGGTCTCAAAGATGGGGTAAACCTGAAGCCAGAAGACCCTAAC 27901 ||||| || | ||||| || ||||| || | || || || ||| || || ||| Sbjct 32693 TTCCCAAAATTGATATTTACACTAAAAGACGGAATCAATCTTAAACCAACTGATCCAAAC 32752 Query 27902 TACGATATTAAGCAGCTTGCATTAGAATGTGCTACTGTTCGCATGTATCCAGACATACTT 27961 || || || || || | || ||||||||||| || | ||||| ||||| || || Sbjct 32753 TATGACATCAAACAATTAGCCTTAGAATGTGCCACAAAAAGAATGTACCCAGATATTCTA 32812 Query 27962 AACTACGATAAGACTGTTGAAATTACAGGCGGATATAAAGCACCTATGGGCTGTCGCTCA 28021 || || || |||| |||||| | ||||| | | |||| ||| |||||||||||||| Sbjct 32813 AATTATGACAAGATCGTTGAATTGACAGGAAGCTTCAAAGTACCAATGGGCTGTCGCTCC 32872 Query 28022 TTCTTGTCTACTTGGTATGATGAAGACGGTAAAGAAACATATGCAGGTCGTAATAACCTT 28081 ||||| |||| | || || ||||| ||||| ||| || | | || || Sbjct 32873 TTCTTACAAGGTTGGAAAGACGAGAACGGTGAAGAAGTGAATGTCGGAAGAATGAATCTA 32932 Query 28082 GGTGTGGTTTCTCTGAACATTCCTAAGATTGCGCTAGAAGCTCAGCTAGACTATGATAAG 28141 ||||||||| | ||||| | || ||| || ||||||| | ||| | || || Sbjct 32933 GGTGTGGTTACGTTGAACTTGCCGCGGATCGCCTTAGAAGCAGACGGTGACCAAGAAAAA 32992 Query 28142 TTCTGGACATTGCT 28155 |||||| ||| || Sbjct 32993 TTCTGGCAATTACT 33006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355998480754108