Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq14859 96.9 1e-15 >seq14859 Length=68005 Score = 96.9 bits (106), Expect = 1e-15 Identities = 133/183 (73%), Gaps = 16/183 (9%) Strand=Plus/Plus Query 1 ATGCCAAGACAAAGAGACCCAAGACGAGATGAAGC-------ATTTGAGATATGGAAAGC 53 ||| ||||| || | || |||||||| |||||||| ||||| ||||| | Sbjct 28711 ATGGCAAGAAAACGTGATCCAAGACGTGATGAAGCCAAAAGGATTTGGT---TGGAATCC 28767 Query 54 CAGCGGCGGAGAAATGAAACTAAAGGACATTGCCGCTAAATTAGGTGTATCTGATACACA 113 || ||||||| | || ||||||||||||| | ||||| ||| || ||| |||| Sbjct 28768 AAG----GGAGAAAAGCAATTAAAGGACATTGCAACAGAATTAAATGTTTCAGATTCACA 28823 Query 114 AGTCCGAAAATGGAAAAACCTAGACCAATGGGAACG-GAAATTGAAAGGTAACGTTACCA 172 ||| ||||||||||| |||| ||| ||| || |||||||||||||| ||||||| Sbjct 28824 AGTTAGAAAATGGAAATCTATAGATAAAT-GGAGCGATAAATTGAAAGGTAATGTTACCA 28882 Query 173 TTG 175 ||| Sbjct 28883 TTG 28885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157450516883976