Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ismenius_20[genbank_20GCA_5F001485965.1_202015-12-16] 160,084 sequences; 259,837,422 total letters Query= NC_019782.1 Length=36566 Score E Sequences producing significant alignments: (Bits) Value seq4244 134 3e-27 seq14088 123 6e-24 >seq4244 Length=32475 Score = 134 bits (148), Expect = 3e-27 Identities = 398/593 (67%), Gaps = 32/593 (5%) Strand=Plus/Plus Query 26247 TACCATCTTATAAGCGCATGTGTATAACAATTATGAAAAATGA-CCATACAGCCAAGTAT 26305 |||| ||||| || | ||||||||||| ||| | |||||||| ||| | | | ||| Sbjct 13238 TACCCTCTTACAAAAGAATGTGTATAACTATTTTAAAAAATGATACATCTTGTCGA-TAT 13296 Query 26306 ATGGGATTTGCAAGAACCAAAG------CACAAGAA-GAAAAGAGGAGA-AAAGCAATTG 26357 ||||| ||| | ||| |||| |||| || |||||||| || || |||| | Sbjct 13297 ATGGGTTTTTCTCAAACAAAAGATGAACTACAAAAACAAAAAGAGGCGATGAAACAATGG 13356 Query 26358 AAAAGTACCAAAACATCCTTTAAAAGCCCGGTATATAATGTCAGACCAGTACCAATCGAG 26417 || ||||||| | || | || || | |||||||| | | | | || || || Sbjct 13357 CAA---ACCAAAA-ACACTATTTGAGTCCCATTTATAATGTGAAAAAAATTCCCATAGAA 13412 Query 26418 AAAATACAAGCTAACACATACAACCCTAACCACGTTGCACCACCTGAAATGAAGCTTTTA 26477 || |||||||| ||| || || ||||| || |||| ||| | || | ||| Sbjct 13413 AACATACAAGCAAACGATTATAATCCTAATGTAGTGGCACATGTAGAATTTAAATTGTTA 13472 Query 26478 TATGAGTCAATCAAAAAT----GATGGATATACTATGCCTATTGTCTGCTACTA-TCTTA 26532 ||| ||||| | | |||||||| || ||||| ||||| ||||| || || | Sbjct 13473 ---GAG-CAATCTATTTTGTTAGATGGATACACAATGCCCATTGTATGCTATTACTCAT- 13527 Query 26533 AAGATAAAGACAAGTATGAAATTGTAGATGGTTATCACCGATATACCACTATGCTAAAAC 26592 || |||||| | ||||||||||||||||||||||| |||| | ||| ||||| Sbjct 13528 CTGACAAAGACTATTATGAAATTGTAGATGGTTATCATCGATTTTTAGTGATG-AAAAAC 13586 Query 26593 ACAAA-GATATCTATGAAAGAGAGCATGGTATG-TTGCCTGTGTCAGTGATTGACAAACC 26650 |||| || || ||||| ||||| | || ||| || ||||| | ||||| ||||| Sbjct 13587 TCAAAGGAAATATATGAGAGAGAAGAAGG-ATGTTTACCTGTAAGTATTATTGATAAACC 13645 Query 26651 CCTTGAAGACAGAATTGCATCCACAATTAGGCATAACAGAGCTAGAGGACAACACAGTGT 26710 | || ||| | ||| || ||| | ||||| ||||||||||| ||| | | | Sbjct 13646 ATTATCCGAAAGAGTCGCAAGTACTATTCGACATAATAGAGCTAGAGGTACACATAATAT 13705 Query 26711 TGATTTAATGGT--TAATATCGTCAATGAATTAAAAGATGCAGGTATGTCTGATGCTTGG 26768 ||||| |||||| ||||| |||| | ||| ||| || ||| | ||| ||| Sbjct 13706 TGATTCAATGGTTGTAATA-ATTCAA-AATTTAGTAGAAGCTGGTTTAAGTGACAAATGG 13763 Query 26769 ATTATGAAAAACATCGGTATGGATGCGGACGAGCTTTTAAGACTAAAACAAAT 26821 || |||| || | ||||||||| || || | || ||||||| ||||| Sbjct 13764 ATCATGACTAATTTAGGTATGGATAAAGATGAATTATTGCGACTAAAGCAAAT 13816 >seq14088 Length=28720 Score = 123 bits (136), Expect = 6e-24 Identities = 190/268 (71%), Gaps = 5/268 (2%) Strand=Plus/Minus Query 28066 TGATT-TAATCAAAGAGTCAGGCGTTTATTCATTAATATTCAGCAGTCAAA--TGCCTAA 28122 ||||| ||||||| |||||||| ||||| || | ||||| |||| || | || || Sbjct 2992 TGATTGTAATCAATGAGTCAGG--TTTATACAGTCTTATTCTAAAGTCCAAACTTCCGAA 2935 Query 28123 CGCTAAGAAATTTAAGCATTGGGTAACGTCAGAAGTTTTACCTGCCATTCGTAAGCATGG 28182 || || |||||||| ||||||||| |||||| |||| | ||| | ||| | || Sbjct 2934 TGCCAAAAAATTTAAAAGATGGGTAACGAGTGAAGTTCTACCATCAATTAGAAAGAACGG 2875 Query 28183 CGCTTATATGACTGATGCAAAAGCTTTTGATGTCATTCACAACAAAAATGGATTAGCTGA 28242 ||| || | || ||| |||||| | ||| | | ||||| |||| | |||| || Sbjct 2874 CGCATACCTAACCGATCAAAAAGCGTATGAGATTACACACAATCCAAATTCACTAGCAGA 2815 Query 28243 TTTGCTTCAACAAGCGGCAGATCAATTGAAACAAAAAGATATTCAAATTGAAGAAATGAA 28302 | || | |||||| | || ||| | |||||||||||| | || |||||||| | Sbjct 2814 TCTGTTGTTACAAGCAGGTGAACAACTAAAACAAAAAGATTTGGTTATCCAAGAAATGCA 2755 Query 28303 ACCTAAAGCATTATTTGCCGATTCAGTA 28330 ||||||||||||||| | ||| ||||| Sbjct 2754 ACCTAAAGCATTATTCTCAGATGCAGTA 2727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116667393162624